Protein–RNA interactions for Protein: Q99102

MUC4, Mucin-4, humanhuman

Predictions only

Length 2,169 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MUC4Q99102 SEPT8-216ENST00000620483 4335 ntTSL 5 BASIC13.63□□□□□ -0.23
MUC4Q99102 CCDC50-202ENST00000392456 2454 ntAPPRIS P4 TSL 1 (best) BASIC13.63□□□□□ -0.23
MUC4Q99102 DDX42-216ENST00000583590 4148 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
MUC4Q99102 NAT6-201ENST00000354862 1330 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
MUC4Q99102 MFSD14A-201ENST00000370152 2777 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
MUC4Q99102 AL162741.1-201ENST00000565563 1558 ntBASIC13.63□□□□□ -0.23
MUC4Q99102 BORCS6-201ENST00000389017 2575 ntAPPRIS P1 BASIC13.63□□□□□ -0.23
MUC4Q99102 PARD3-205ENST00000374773 3420 ntTSL 5 BASIC13.63□□□□□ -0.23
MUC4Q99102 ANKRD18DP-201ENST00000335478 2171 ntTSL 2 BASIC13.63□□□□□ -0.23
MUC4Q99102 DIAPH1-203ENST00000389057 5762 ntAPPRIS ALT2 TSL 5 BASIC13.63□□□□□ -0.23
MUC4Q99102 CLN3-204ENST00000357857 1720 ntTSL 2 BASIC13.63□□□□□ -0.23
MUC4Q99102 TRPV4-208ENST00000544971 2295 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
MUC4Q99102 AMDHD2-201ENST00000293971 1459 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
MUC4Q99102 KCNIP4-205ENST00000382152 1767 ntTSL 5 BASIC13.63□□□□□ -0.23
MUC4Q99102 NR4A1-203ENST00000394824 2639 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
MUC4Q99102 DNLZ-202ENST00000371739 2934 ntTSL 5 BASIC13.63□□□□□ -0.23
MUC4Q99102 FN3KRP-201ENST00000269373 1849 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
MUC4Q99102 ENTPD6-209ENST00000433259 2654 ntTSL 5 BASIC13.63□□□□□ -0.23
MUC4Q99102 BSX-201ENST00000343035 830 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
MUC4Q99102 UFD1-202ENST00000399523 1007 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
MUC4Q99102 TMPOP1-202ENST00000424642 1267 ntBASIC13.63□□□□□ -0.23
MUC4Q99102 KCNC4-204ENST00000438661 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
MUC4Q99102 KSR1P1-201ENST00000446298 240 ntBASIC13.63□□□□□ -0.23
MUC4Q99102 SBF2-AS1-202ENST00000499953 854 ntTSL 5 BASIC13.63□□□□□ -0.23
MUC4Q99102 AC092718.1-201ENST00000501068 1088 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
MUC4Q99102 TMEM41B-203ENST00000527813 803 ntTSL 5 BASIC13.63□□□□□ -0.23
MUC4Q99102 AC015712.2-203ENST00000560461 688 ntTSL 3 BASIC13.63□□□□□ -0.23
MUC4Q99102 GRAP-204ENST00000573099 846 ntTSL 3 BASIC13.63□□□□□ -0.23
MUC4Q99102 AC006504.5-207ENST00000586220 487 ntTSL 2 BASIC13.63□□□□□ -0.23
MUC4Q99102 AC020922.2-201ENST00000596786 359 ntTSL 4 BASIC13.63□□□□□ -0.23
MUC4Q99102 RPL23AP53-202ENST00000606507 370 ntTSL 3 BASIC13.63□□□□□ -0.23
MUC4Q99102 AC004816.2-201ENST00000622856 284 ntTSL 5 BASIC13.63□□□□□ -0.23
MUC4Q99102 PTP4A3-202ENST00000349124 2710 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
MUC4Q99102 FAM49B-214ENST00000519540 2021 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
MUC4Q99102 AEBP2-201ENST00000266508 3620 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
MUC4Q99102 TNKS2-201ENST00000371627 6157 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
MUC4Q99102 KRT16P1-201ENST00000399124 1418 ntBASIC13.63□□□□□ -0.23
MUC4Q99102 ITPR3-201ENST00000374316 9870 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
MUC4Q99102 MFSD1-201ENST00000264266 1594 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
MUC4Q99102 KCNIP4-206ENST00000447367 1641 ntTSL 5 BASIC13.62□□□□□ -0.23
MUC4Q99102 LRRC23-201ENST00000007969 1615 ntAPPRIS P4 TSL 1 (best) BASIC13.62□□□□□ -0.23
MUC4Q99102 CMTM8-201ENST00000307526 1174 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
MUC4Q99102 C7orf50-201ENST00000357429 1294 ntAPPRIS P2 TSL 1 (best) BASIC13.62□□□□□ -0.23
MUC4Q99102 ASH1L-AS1-202ENST00000456633 911 ntTSL 2 BASIC13.62□□□□□ -0.23
MUC4Q99102 MOK-228ENST00000523231 1114 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
MUC4Q99102 AP003501.2-201ENST00000524433 477 ntTSL 4 BASIC13.62□□□□□ -0.23
MUC4Q99102 TK2-204ENST00000525974 1178 ntTSL 2 BASIC13.62□□□□□ -0.23
MUC4Q99102 TMEM72-203ENST00000544540 1018 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
MUC4Q99102 AL049597.2-201ENST00000565575 961 ntBASIC13.62□□□□□ -0.23
MUC4Q99102 NAPRT-202ENST00000426292 1654 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
MUC4Q99102 ISYNA1-206ENST00000578963 1691 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
MUC4Q99102 APMAP-201ENST00000217456 2430 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
MUC4Q99102 RNASEH2C-203ENST00000528220 1337 ntTSL 2 BASIC13.62□□□□□ -0.23
MUC4Q99102 STIM2-202ENST00000465503 3613 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
MUC4Q99102 HNRNPUL1-203ENST00000378215 2864 ntTSL 2 BASIC13.62□□□□□ -0.23
MUC4Q99102 DYNC1LI2-201ENST00000258198 4515 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
MUC4Q99102 SCOC-208ENST00000510586 2193 ntAPPRIS ALT1 TSL 5 BASIC13.62□□□□□ -0.23
MUC4Q99102 TMEM214-201ENST00000238788 2990 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
MUC4Q99102 C6orf118-201ENST00000230301 1812 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
MUC4Q99102 EHBP1-209ENST00000431489 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
MUC4Q99102 KRT8P11-201ENST00000409686 1436 ntBASIC13.62□□□□□ -0.23
MUC4Q99102 AL135905.2-201ENST00000584934 1404 ntBASIC13.62□□□□□ -0.23
MUC4Q99102 AC079598.2-202ENST00000546624 1451 ntBASIC13.62□□□□□ -0.23
MUC4Q99102 PMAIP1-202ENST00000316660 1948 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
MUC4Q99102 NOP9-202ENST00000396802 1942 ntTSL 5 BASIC13.62□□□□□ -0.23
MUC4Q99102 MAFF-201ENST00000338483 2490 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
MUC4Q99102 TJP3-205ENST00000587686 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
MUC4Q99102 MST1R-214ENST00000613534 2025 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
MUC4Q99102 C7orf49-202ENST00000424142 1738 ntTSL 2 BASIC13.62□□□□□ -0.23
MUC4Q99102 UBE2K-201ENST00000261427 5245 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
MUC4Q99102 DNAJC8-201ENST00000263697 1759 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
MUC4Q99102 AC083906.6-201ENST00000641366 219 ntBASIC13.62□□□□□ -0.23
MUC4Q99102 PRSS35-201ENST00000369700 2440 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
MUC4Q99102 RNF38-202ENST00000350199 5104 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
MUC4Q99102 IL15-201ENST00000296545 2472 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
MUC4Q99102 HOXC10-201ENST00000303460 1936 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
MUC4Q99102 ULK3-220ENST00000569437 2611 ntAPPRIS ALT1 TSL 1 (best) BASIC13.62□□□□□ -0.23
MUC4Q99102 COLEC12-201ENST00000400256 5742 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
MUC4Q99102 PDE9A-209ENST00000398227 1606 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
MUC4Q99102 PPP2R2C-206ENST00000507294 1667 ntTSL 2 BASIC13.61□□□□□ -0.23
MUC4Q99102 RBM26-202ENST00000438724 5152 ntAPPRIS ALT1 TSL 1 (best) BASIC13.61□□□□□ -0.23
MUC4Q99102 CDK10-202ENST00000353379 1798 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
MUC4Q99102 MARK1-205ENST00000611084 5321 ntAPPRIS ALT1 TSL 1 (best) BASIC13.61□□□□□ -0.23
MUC4Q99102 HOXB8-201ENST00000239144 1823 ntAPPRIS P2 TSL 2 BASIC13.61□□□□□ -0.23
MUC4Q99102 PAK4-201ENST00000321944 2555 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
MUC4Q99102 CCDC91-220ENST00000545336 2738 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
MUC4Q99102 ADAMTS19-205ENST00000638972 5089 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
MUC4Q99102 B3GNT9-201ENST00000449549 2917 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
MUC4Q99102 MRPL2-207ENST00000487429 905 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
MUC4Q99102 SIVA1-203ENST00000535554 1244 ntAPPRIS ALT1 TSL 2 BASIC13.61□□□□□ -0.23
MUC4Q99102 AC090877.2-202ENST00000560363 574 ntTSL 2 BASIC13.61□□□□□ -0.23
MUC4Q99102 RN7SL471P-201ENST00000580476 299 ntBASIC13.61□□□□□ -0.23
MUC4Q99102 AC005943.1-201ENST00000585937 1002 ntAPPRIS P1 TSL 3 BASIC13.61□□□□□ -0.23
MUC4Q99102 MARK4-211ENST00000622871 1147 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
MUC4Q99102 SHANK1-203ENST00000391813 4785 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
MUC4Q99102 CUTC-202ENST00000370476 1346 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
MUC4Q99102 HSD11B1L-221ENST00000583928 1319 ntTSL 5 BASIC13.61□□□□□ -0.23
MUC4Q99102 GGPS1-206ENST00000488594 1396 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
MUC4Q99102 SKOR1-204ENST00000554240 3597 ntAPPRIS ALT2 TSL 5 BASIC13.61□□□□□ -0.23
MUC4Q99102 GNE-201ENST00000377902 2565 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Retrieved 100 of 98,524 protein–RNA pairs in 27 ms