Protein–RNA interactions for Protein: Q96S21

RAB40C, Ras-related protein Rab-40C, humanhuman

Predictions only

Length 281 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40CQ96S21 SP3-203ENST00000418194 3937 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
RAB40CQ96S21 RRAGD-202ENST00000369415 4900 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
RAB40CQ96S21 HCK-202ENST00000375852 2082 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
RAB40CQ96S21 SDCBP-202ENST00000413219 2086 ntAPPRIS P3 TSL 2 BASIC15.13■□□□□ 0.01
RAB40CQ96S21 RNPS1-202ENST00000320225 2241 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
RAB40CQ96S21 FBXL17-201ENST00000359660 4510 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
RAB40CQ96S21 FST-202ENST00000396947 2538 ntTSL 5 BASIC15.13■□□□□ 0.01
RAB40CQ96S21 LRCH1-201ENST00000311191 4710 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
RAB40CQ96S21 SCYL1-202ENST00000279270 1659 ntTSL 5 BASIC15.13■□□□□ 0.01
RAB40CQ96S21 SLC25A51-202ENST00000377716 1691 ntAPPRIS P1 TSL 3 BASIC15.13■□□□□ 0.01
RAB40CQ96S21 PARD3-205ENST00000374773 3420 ntTSL 5 BASIC15.13■□□□□ 0.01
RAB40CQ96S21 AC138028.4-201ENST00000564984 1845 ntBASIC15.13■□□□□ 0.01
RAB40CQ96S21 SMC5-AS1-201ENST00000594708 1818 ntTSL 2 BASIC15.13■□□□□ 0.01
RAB40CQ96S21 GIT1-203ENST00000394869 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
RAB40CQ96S21 ASZ1-201ENST00000284629 1865 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
RAB40CQ96S21 OLA1-201ENST00000284719 4417 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
RAB40CQ96S21 C14orf180-202ENST00000410013 2009 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
RAB40CQ96S21 MSI2-203ENST00000416426 1714 ntTSL 2 BASIC15.13■□□□□ 0.01
RAB40CQ96S21 CSF1-205ENST00000420111 1083 ntTSL 5 BASIC15.13■□□□□ 0.01
RAB40CQ96S21 TSPY23P-201ENST00000440136 739 ntBASIC15.13■□□□□ 0.01
RAB40CQ96S21 LIMD2-202ENST00000578061 756 ntAPPRIS P1 TSL 2 BASIC15.13■□□□□ 0.01
RAB40CQ96S21 AC007786.1-201ENST00000587859 709 ntTSL 2 BASIC15.13■□□□□ 0.01
RAB40CQ96S21 MFSD14C-203ENST00000602917 786 ntAPPRIS P5 TSL 1 (best) BASIC15.13■□□□□ 0.01
RAB40CQ96S21 AL161421.1-201ENST00000619666 1101 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
RAB40CQ96S21 FBXL5-202ENST00000412094 2837 ntAPPRIS ALT1 TSL 1 (best) BASIC15.13■□□□□ 0.01
RAB40CQ96S21 NOL4-211ENST00000589544 2221 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
RAB40CQ96S21 SEC11C-202ENST00000509791 2054 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
RAB40CQ96S21 ALAS2-203ENST00000396198 1936 ntTSL 5 BASIC15.13■□□□□ 0.01
RAB40CQ96S21 RNASEH2C-203ENST00000528220 1337 ntTSL 2 BASIC15.13■□□□□ 0.01
RAB40CQ96S21 MOAP1-201ENST00000298894 2441 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
RAB40CQ96S21 L1CAM-203ENST00000370055 4655 ntTSL 5 BASIC15.13■□□□□ 0.01
RAB40CQ96S21 MFSD14A-201ENST00000370152 2777 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
RAB40CQ96S21 SNTB1-201ENST00000395601 5164 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
RAB40CQ96S21 TRIM8-201ENST00000302424 2831 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
RAB40CQ96S21 BABAM1-213ENST00000601043 1366 ntAPPRIS P3 TSL 2 BASIC15.12■□□□□ 0.01
RAB40CQ96S21 SYT15-202ENST00000374323 6428 ntTSL 2 BASIC15.12■□□□□ 0.01
RAB40CQ96S21 ADAMTS16-201ENST00000274181 4979 ntAPPRIS P1 TSL 2 BASIC15.12■□□□□ 0.01
RAB40CQ96S21 KXD1-203ENST00000540691 1592 ntAPPRIS P1 TSL 3 BASIC15.12■□□□□ 0.01
RAB40CQ96S21 ALDH1A3-201ENST00000329841 3924 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
RAB40CQ96S21 AC112777.1-201ENST00000540175 1423 ntBASIC15.12■□□□□ 0.01
RAB40CQ96S21 FZD10-201ENST00000229030 3281 ntAPPRIS P1 BASIC15.12■□□□□ 0.01
RAB40CQ96S21 KRTAP5-8-201ENST00000398534 1183 ntAPPRIS P1 BASIC15.12■□□□□ 0.01
RAB40CQ96S21 WIPF1-207ENST00000410117 777 ntTSL 3 BASIC15.12■□□□□ 0.01
RAB40CQ96S21 AL021707.1-201ENST00000416406 500 ntTSL 3 BASIC15.12■□□□□ 0.01
RAB40CQ96S21 MIR1302-2HG-202ENST00000473358 712 ntTSL 5 BASIC15.12■□□□□ 0.01
RAB40CQ96S21 AL929601.1-201ENST00000551565 573 ntTSL 4 BASIC15.12■□□□□ 0.01
RAB40CQ96S21 AC140725.1-202ENST00000561145 712 ntTSL 5 BASIC15.12■□□□□ 0.01
RAB40CQ96S21 AC133552.2-202ENST00000575694 574 ntBASIC15.12■□□□□ 0.01
RAB40CQ96S21 HSD17B12-213ENST00000637401 866 ntTSL 4 BASIC15.12■□□□□ 0.01
RAB40CQ96S21 VKORC1L1-201ENST00000360768 5899 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
RAB40CQ96S21 RECK-201ENST00000377966 4888 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
RAB40CQ96S21 AC005865.2-201ENST00000505276 2303 ntTSL 2 BASIC15.12■□□□□ 0.01
RAB40CQ96S21 GABRB3-202ENST00000311550 5781 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
RAB40CQ96S21 CDKN1B-201ENST00000228872 2657 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
RAB40CQ96S21 GNA13-201ENST00000439174 4922 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
RAB40CQ96S21 NRG2-205ENST00000361474 3020 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
RAB40CQ96S21 KIF16B-201ENST00000354981 5261 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
RAB40CQ96S21 GPS1-201ENST00000306823 1842 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
RAB40CQ96S21 LARP4B-211ENST00000612396 8546 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
RAB40CQ96S21 P2RY6-202ENST00000393590 2398 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
RAB40CQ96S21 ZFP91-201ENST00000316059 5220 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
RAB40CQ96S21 ACAA1-201ENST00000301810 1540 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
RAB40CQ96S21 HEXIM2-201ENST00000307275 1528 ntAPPRIS P1 TSL 2 BASIC15.12■□□□□ 0.01
RAB40CQ96S21 STK11-201ENST00000326873 2611 ntAPPRIS P2 TSL 1 (best) BASIC15.12■□□□□ 0.01
RAB40CQ96S21 AC087500.1-202ENST00000571689 1715 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
RAB40CQ96S21 CDH22-203ENST00000537909 3902 ntAPPRIS P1 TSL 2 BASIC15.11■□□□□ 0.01
RAB40CQ96S21 RWDD4-206ENST00000512740 1393 ntTSL 5 BASIC15.11■□□□□ 0.01
RAB40CQ96S21 AHSA2-202ENST00000394457 6574 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
RAB40CQ96S21 NOL4L-211ENST00000621426 6577 ntAPPRIS P2 TSL 5 BASIC15.11■□□□□ 0.01
RAB40CQ96S21 RFC2-202ENST00000352131 1576 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
RAB40CQ96S21 RCC2P6-201ENST00000526625 1557 ntBASIC15.11■□□□□ 0.01
RAB40CQ96S21 MFSD11-220ENST00000621483 2850 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
RAB40CQ96S21 HS3ST2-201ENST00000261374 2314 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
RAB40CQ96S21 LINC00574-201ENST00000420557 2318 ntTSL 2 BASIC15.11■□□□□ 0.01
RAB40CQ96S21 PLCB2-202ENST00000456256 4242 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
RAB40CQ96S21 PROSER2-201ENST00000277570 3333 ntAPPRIS P2 TSL 1 (best) BASIC15.11■□□□□ 0.01
RAB40CQ96S21 ZCWPW1-202ENST00000398027 2356 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
RAB40CQ96S21 PTPN6-204ENST00000456013 2389 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
RAB40CQ96S21 TBC1D20-201ENST00000354200 4466 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
RAB40CQ96S21 SAE1-201ENST00000270225 2049 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
RAB40CQ96S21 PRSS23-209ENST00000533902 2043 ntTSL 4 BASIC15.11■□□□□ 0.01
RAB40CQ96S21 TMEM45B-201ENST00000281441 2234 ntAPPRIS P1 TSL 2 BASIC15.11■□□□□ 0.01
RAB40CQ96S21 CDK11A-203ENST00000357760 2446 ntAPPRIS ALT1 TSL 1 (best) BASIC15.11■□□□□ 0.01
RAB40CQ96S21 CDK11A-204ENST00000358779 2419 ntAPPRIS ALT1 TSL 1 (best) BASIC15.11■□□□□ 0.01
RAB40CQ96S21 CDK11A-206ENST00000378638 2429 ntTSL 5 BASIC15.11■□□□□ 0.01
RAB40CQ96S21 CDK11A-208ENST00000404249 2449 ntAPPRIS P4 TSL 1 (best) BASIC15.11■□□□□ 0.01
RAB40CQ96S21 IZUMO2-201ENST00000293405 728 ntAPPRIS P2 TSL 1 (best) BASIC15.11■□□□□ 0.01
RAB40CQ96S21 PYCR3-202ENST00000377579 985 ntTSL 2 BASIC15.11■□□□□ 0.01
RAB40CQ96S21 N4BP2L1-203ENST00000380133 903 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
RAB40CQ96S21 MIR663A-201ENST00000385250 93 ntBASIC15.11■□□□□ 0.01
RAB40CQ96S21 PSEN1-203ENST00000394157 1249 ntTSL 2 BASIC15.11■□□□□ 0.01
RAB40CQ96S21 CROCCP5-201ENST00000436658 830 ntBASIC15.11■□□□□ 0.01
RAB40CQ96S21 GATA3-AS1-204ENST00000438755 675 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
RAB40CQ96S21 AL359747.1-201ENST00000442370 536 ntTSL 2 BASIC15.11■□□□□ 0.01
RAB40CQ96S21 AC006970.2-201ENST00000450065 779 ntBASIC15.11■□□□□ 0.01
RAB40CQ96S21 AF201337.1-201ENST00000520239 748 ntBASIC15.11■□□□□ 0.01
RAB40CQ96S21 TPT1-AS1-210ENST00000520590 873 ntTSL 5 BASIC15.11■□□□□ 0.01
RAB40CQ96S21 PNN-205ENST00000556530 601 ntTSL 2 BASIC15.11■□□□□ 0.01
RAB40CQ96S21 ASGR1-204ENST00000572879 797 ntTSL 5 BASIC15.11■□□□□ 0.01
RAB40CQ96S21 TCP11-204ENST00000373979 1882 ntAPPRIS P3 TSL 5 BASIC15.11■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 25.4 ms