Protein–RNA interactions for Protein: Q96PZ7

CSMD1, CUB and sushi domain-containing protein 1, humanhuman

Predictions only

Length 3,565 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1Q96PZ7 BANP-217ENST00000479780 1551 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
CSMD1Q96PZ7 HNRNPDL-210ENST00000630827 1318 ntAPPRIS ALT2 TSL 5 BASIC15.86■□□□□ 0.13
CSMD1Q96PZ7 CDCA4-201ENST00000336219 2513 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
CSMD1Q96PZ7 TMEM79-201ENST00000295694 2191 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
CSMD1Q96PZ7 RPP25-201ENST00000322177 3049 ntAPPRIS P1 BASIC15.86■□□□□ 0.13
CSMD1Q96PZ7 SYCE1-203ENST00000368517 1377 ntAPPRIS P3 TSL 5 BASIC15.86■□□□□ 0.13
CSMD1Q96PZ7 CXorf40A-208ENST00000434353 1524 ntAPPRIS ALT1 TSL 5 BASIC15.86■□□□□ 0.13
CSMD1Q96PZ7 IRGQ-205ENST00000602269 2210 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
CSMD1Q96PZ7 AC026471.3-201ENST00000565137 578 ntTSL 2 BASIC15.86■□□□□ 0.13
CSMD1Q96PZ7 LMNB1-202ENST00000395354 1572 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
CSMD1Q96PZ7 PDLIM2-205ENST00000397761 1491 ntAPPRIS P1 TSL 5 BASIC15.86■□□□□ 0.13
CSMD1Q96PZ7 MAP7-206ENST00000611373 2317 ntAPPRIS ALT2 TSL 5 BASIC15.85■□□□□ 0.13
CSMD1Q96PZ7 CSNK2A2-201ENST00000262506 1701 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
CSMD1Q96PZ7 IL17RC-203ENST00000403601 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
CSMD1Q96PZ7 NPNT-214ENST00000514622 2362 ntTSL 2 BASIC15.85■□□□□ 0.13
CSMD1Q96PZ7 TECR-201ENST00000215567 1171 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
CSMD1Q96PZ7 MRPL55-208ENST00000366734 990 ntAPPRIS P1 TSL 2 BASIC15.85■□□□□ 0.13
CSMD1Q96PZ7 MRPL55-217ENST00000366746 565 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
CSMD1Q96PZ7 ZGLP1-201ENST00000403352 1028 ntAPPRIS ALT2 TSL 5 BASIC15.85■□□□□ 0.13
CSMD1Q96PZ7 OST4-202ENST00000447619 458 ntAPPRIS P1 TSL 2 BASIC15.85■□□□□ 0.13
CSMD1Q96PZ7 LAPTM4B-204ENST00000619747 2758 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
CSMD1Q96PZ7 BHLHE22-201ENST00000321870 3262 ntAPPRIS P1 BASIC15.85■□□□□ 0.13
CSMD1Q96PZ7 PAQR6-215ENST00000623241 1961 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
CSMD1Q96PZ7 ABCC5-204ENST00000392579 1848 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
CSMD1Q96PZ7 UBE2F-201ENST00000272930 2009 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
CSMD1Q96PZ7 ATP23-201ENST00000300145 1245 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
CSMD1Q96PZ7 PRORY-201ENST00000382764 878 ntAPPRIS P1 TSL 5 BASIC15.85■□□□□ 0.13
CSMD1Q96PZ7 MRPS24-203ENST00000418740 743 ntTSL 2 BASIC15.85■□□□□ 0.13
CSMD1Q96PZ7 CNN2P11-201ENST00000429351 262 ntBASIC15.85■□□□□ 0.13
CSMD1Q96PZ7 COX20P2-201ENST00000452636 358 ntBASIC15.85■□□□□ 0.13
CSMD1Q96PZ7 AP005717.1-202ENST00000523563 419 ntTSL 3 BASIC15.85■□□□□ 0.13
CSMD1Q96PZ7 PSMA6-216ENST00000627895 484 ntTSL 5 BASIC15.85■□□□□ 0.13
CSMD1Q96PZ7 PAOX-201ENST00000278060 1858 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
CSMD1Q96PZ7 FNDC8-201ENST00000158009 1388 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
CSMD1Q96PZ7 WDR45-205ENST00000376358 1432 ntTSL 2 BASIC15.85■□□□□ 0.13
CSMD1Q96PZ7 KCTD18-201ENST00000359878 2940 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
CSMD1Q96PZ7 XXYLT1-204ENST00000429994 865 ntTSL 3 BASIC15.85■□□□□ 0.13
CSMD1Q96PZ7 ANAPC11-204ENST00000571024 668 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
CSMD1Q96PZ7 ANAPC11-218ENST00000582222 523 ntTSL 2 BASIC15.85■□□□□ 0.13
CSMD1Q96PZ7 C12orf42-201ENST00000378113 1513 ntAPPRIS P2 TSL 5 BASIC15.85■□□□□ 0.13
CSMD1Q96PZ7 ARFRP1-208ENST00000612256 2974 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
CSMD1Q96PZ7 ESYT3-201ENST00000289135 1356 ntTSL 5 BASIC15.84■□□□□ 0.13
CSMD1Q96PZ7 HTD2-206ENST00000481972 1378 ntAPPRIS P1 TSL 2 BASIC15.84■□□□□ 0.13
CSMD1Q96PZ7 RSAD1-201ENST00000258955 2528 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
CSMD1Q96PZ7 LINC01547-202ENST00000397841 2303 ntTSL 2 BASIC15.84■□□□□ 0.13
CSMD1Q96PZ7 SUMF2-201ENST00000275607 1894 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
CSMD1Q96PZ7 AC096719.1-201ENST00000510705 1874 ntTSL 5 BASIC15.84■□□□□ 0.13
CSMD1Q96PZ7 AC233280.1-201ENST00000423600 1684 ntTSL 2 BASIC15.84■□□□□ 0.13
CSMD1Q96PZ7 FAM19A5-204ENST00000406880 833 ntTSL 3 BASIC15.84■□□□□ 0.13
CSMD1Q96PZ7 TXNRD2-212ENST00000485358 850 ntTSL 2 BASIC15.84■□□□□ 0.13
CSMD1Q96PZ7 PUDP-206ENST00000540122 825 ntTSL 2 BASIC15.84■□□□□ 0.13
CSMD1Q96PZ7 SELENOM-210ENST00000611680 689 ntAPPRIS ALT2 TSL 5 BASIC15.84■□□□□ 0.13
CSMD1Q96PZ7 AC104581.1-201ENST00000324348 2852 ntAPPRIS P1 TSL 2 BASIC15.84■□□□□ 0.13
CSMD1Q96PZ7 WNT6-201ENST00000233948 1703 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
CSMD1Q96PZ7 DISC1-202ENST00000317586 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
CSMD1Q96PZ7 SLC27A1-204ENST00000598424 2681 ntTSL 2 BASIC15.84■□□□□ 0.13
CSMD1Q96PZ7 NSMF-201ENST00000265663 2981 ntAPPRIS P3 TSL 1 (best) BASIC15.84■□□□□ 0.13
CSMD1Q96PZ7 CYP2D7-208ENST00000614967 1504 ntTSL 5 BASIC15.84■□□□□ 0.13
CSMD1Q96PZ7 RGS3-232ENST00000620489 1503 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
CSMD1Q96PZ7 DNAJB3-201ENST00000446806 729 ntBASIC15.84■□□□□ 0.13
CSMD1Q96PZ7 AC005020.2-201ENST00000455905 830 ntAPPRIS P1 TSL 3 BASIC15.84■□□□□ 0.13
CSMD1Q96PZ7 MTUS2-205ENST00000542829 1165 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
CSMD1Q96PZ7 AL449423.1-201ENST00000578935 435 ntTSL 3 BASIC15.84■□□□□ 0.13
CSMD1Q96PZ7 LIMD2-211ENST00000583211 1298 ntTSL 3 BASIC15.84■□□□□ 0.13
CSMD1Q96PZ7 AC012645.4-201ENST00000610691 1061 ntBASIC15.84■□□□□ 0.13
CSMD1Q96PZ7 HSP90B1-211ENST00000640977 1127 ntTSL 5 BASIC15.84■□□□□ 0.13
CSMD1Q96PZ7 BEST4-201ENST00000372207 2047 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
CSMD1Q96PZ7 MORF4L2-AS1-201ENST00000435306 2086 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
CSMD1Q96PZ7 WEE1-202ENST00000450114 2799 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
CSMD1Q96PZ7 PAQR9-201ENST00000340634 2452 ntAPPRIS P1 BASIC15.84■□□□□ 0.13
CSMD1Q96PZ7 SCD5-201ENST00000273908 1995 ntTSL 2 BASIC15.84■□□□□ 0.13
CSMD1Q96PZ7 TMUB1-204ENST00000476627 882 ntAPPRIS P1 TSL 3 BASIC15.84■□□□□ 0.13
CSMD1Q96PZ7 TTLL12-204ENST00000494035 888 ntTSL 2 BASIC15.84■□□□□ 0.13
CSMD1Q96PZ7 LINC02123-201ENST00000514869 885 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
CSMD1Q96PZ7 ERCC1-212ENST00000591636 836 ntTSL 2 BASIC15.84■□□□□ 0.13
CSMD1Q96PZ7 AC008735.1-201ENST00000592252 802 ntTSL 5 BASIC15.84■□□□□ 0.13
CSMD1Q96PZ7 RASSF7-204ENST00000431809 1745 ntAPPRIS ALT2 TSL 5 BASIC15.83■□□□□ 0.13
CSMD1Q96PZ7 NRXN1-202ENST00000342183 3315 ntTSL 1 (best) BASIC15.83■□□□□ 0.13
CSMD1Q96PZ7 UBL4A-202ENST00000369660 2382 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
CSMD1Q96PZ7 LBX2-AS1-202ENST00000603175 2083 ntBASIC15.83■□□□□ 0.13
CSMD1Q96PZ7 LINC00311-201ENST00000366314 1566 ntTSL 1 (best) BASIC15.83■□□□□ 0.13
CSMD1Q96PZ7 DOK3-201ENST00000312943 2292 ntTSL 1 (best) BASIC15.83■□□□□ 0.13
CSMD1Q96PZ7 LINC01615-202ENST00000449466 603 ntTSL 3 BASIC15.83■□□□□ 0.12
CSMD1Q96PZ7 EIF5A2-203ENST00000474096 570 ntTSL 4 BASIC15.83■□□□□ 0.12
CSMD1Q96PZ7 AC021739.5-201ENST00000558637 494 ntTSL 3 BASIC15.83■□□□□ 0.12
CSMD1Q96PZ7 MIR5100-201ENST00000579544 119 ntBASIC15.83■□□□□ 0.12
CSMD1Q96PZ7 NUDT10-201ENST00000356450 1917 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
CSMD1Q96PZ7 GNA15-201ENST00000262958 2133 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
CSMD1Q96PZ7 ACD-215ENST00000620761 1483 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
CSMD1Q96PZ7 RABEPK-202ENST00000373538 1504 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
CSMD1Q96PZ7 CDK4-202ENST00000312990 1650 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
CSMD1Q96PZ7 LHX3-202ENST00000371748 2365 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
CSMD1Q96PZ7 MIPEPP3-202ENST00000424756 347 ntTSL 3 BASIC15.83■□□□□ 0.12
CSMD1Q96PZ7 AC015961.2-201ENST00000589281 701 ntTSL 3 BASIC15.83■□□□□ 0.12
CSMD1Q96PZ7 ACVRL1-202ENST00000419526 1356 ntTSL 2 BASIC15.83■□□□□ 0.12
CSMD1Q96PZ7 MYOZ3-203ENST00000517768 1451 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
CSMD1Q96PZ7 WRB-201ENST00000333781 1616 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
CSMD1Q96PZ7 FAM129C-205ENST00000595684 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
CSMD1Q96PZ7 GRB14-201ENST00000263915 2382 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
CSMD1Q96PZ7 SNRPA1-201ENST00000254193 1055 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 28 ms