Protein–RNA interactions for Protein: Q96KN7

RPGRIP1, X-linked retinitis pigmentosa GTPase regulator-interacting protein 1, humanhuman

Predictions only

Length 1,286 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPGRIP1Q96KN7 AAED1-201ENST00000375234 2863 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
RPGRIP1Q96KN7 CTBP2-214ENST00000531469 1918 ntAPPRIS P1 TSL 2 BASIC20.55■□□□□ 0.88
RPGRIP1Q96KN7 CCNO-201ENST00000282572 1433 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
RPGRIP1Q96KN7 MAEA-208ENST00000505839 1444 ntTSL 2 BASIC20.54■□□□□ 0.88
RPGRIP1Q96KN7 NAPRT-203ENST00000435154 1877 ntTSL 2 BASIC20.54■□□□□ 0.88
RPGRIP1Q96KN7 PAQR4-202ENST00000318782 2793 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
RPGRIP1Q96KN7 TMEM191A-208ENST00000450925 1961 ntTSL 2 BASIC20.54■□□□□ 0.88
RPGRIP1Q96KN7 UBE2I-203ENST00000397514 2976 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
RPGRIP1Q96KN7 MINOS1-NBL1-204ENST00000602662 1623 ntAPPRIS P1 TSL 2 BASIC20.54■□□□□ 0.88
RPGRIP1Q96KN7 PCDHA2-203ENST00000526136 5254 ntAPPRIS P2 TSL 1 (best) BASIC20.54■□□□□ 0.88
RPGRIP1Q96KN7 GGCT-202ENST00000275428 1173 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
RPGRIP1Q96KN7 LGALS7B-201ENST00000314980 483 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
RPGRIP1Q96KN7 ABCD1-202ENST00000370129 1016 ntTSL 2 BASIC20.54■□□□□ 0.88
RPGRIP1Q96KN7 DDRGK1-202ENST00000380201 1128 ntTSL 2 BASIC20.54■□□□□ 0.88
RPGRIP1Q96KN7 CD70-202ENST00000423145 881 ntTSL 2 BASIC20.54■□□□□ 0.88
RPGRIP1Q96KN7 AL450487.1-201ENST00000426799 995 ntBASIC20.54■□□□□ 0.88
RPGRIP1Q96KN7 COX11P1-201ENST00000489116 835 ntBASIC20.54■□□□□ 0.88
RPGRIP1Q96KN7 AMN1-211ENST00000541931 880 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
RPGRIP1Q96KN7 AL929554.1-201ENST00000568665 460 ntAPPRIS P1 TSL 3 BASIC20.54■□□□□ 0.88
RPGRIP1Q96KN7 DUX4-205ENST00000570263 768 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
RPGRIP1Q96KN7 LINC00910-203ENST00000587874 544 ntTSL 4 BASIC20.54■□□□□ 0.88
RPGRIP1Q96KN7 AC243829.1-201ENST00000615128 1059 ntTSL 2 BASIC20.54■□□□□ 0.88
RPGRIP1Q96KN7 CROCCP4-202ENST00000633627 573 ntTSL 3 BASIC20.54■□□□□ 0.88
RPGRIP1Q96KN7 ITGB5-201ENST00000296181 4372 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
RPGRIP1Q96KN7 GALNT2-201ENST00000366672 4454 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
RPGRIP1Q96KN7 C19orf25-206ENST00000588849 1472 ntTSL 5 BASIC20.54■□□□□ 0.88
RPGRIP1Q96KN7 BABAM1-208ENST00000598188 1470 ntAPPRIS P3 TSL 1 (best) BASIC20.54■□□□□ 0.88
RPGRIP1Q96KN7 KIF1BP-204ENST00000626493 2337 ntTSL 5 BASIC20.54■□□□□ 0.88
RPGRIP1Q96KN7 ADCY6-206ENST00000550422 5877 ntTSL 2 BASIC20.54■□□□□ 0.88
RPGRIP1Q96KN7 CCDC71-201ENST00000321895 1781 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
RPGRIP1Q96KN7 AC020916.1-201ENST00000587762 1774 ntBASIC20.54■□□□□ 0.88
RPGRIP1Q96KN7 AL445433.2-201ENST00000425113 2544 ntTSL 2 BASIC20.54■□□□□ 0.88
RPGRIP1Q96KN7 P3H4-202ENST00000393928 2601 ntAPPRIS P2 TSL 1 (best) BASIC20.54■□□□□ 0.88
RPGRIP1Q96KN7 SLC47A1-202ENST00000395585 1998 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
RPGRIP1Q96KN7 FARSA-207ENST00000588025 2057 ntTSL 5 BASIC20.54■□□□□ 0.88
RPGRIP1Q96KN7 WIZP1-201ENST00000531444 2299 ntBASIC20.53■□□□□ 0.88
RPGRIP1Q96KN7 SLC25A47-201ENST00000361529 1738 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
RPGRIP1Q96KN7 ZNF846-205ENST00000588267 1943 ntTSL 2 BASIC20.53■□□□□ 0.88
RPGRIP1Q96KN7 BMP8B-201ENST00000372827 4822 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
RPGRIP1Q96KN7 AC005332.8-201ENST00000622750 2735 ntBASIC20.53■□□□□ 0.88
RPGRIP1Q96KN7 TMIGD2-201ENST00000301272 1262 ntAPPRIS P3 TSL 1 (best) BASIC20.53■□□□□ 0.88
RPGRIP1Q96KN7 PIEZO1-202ENST00000327397 1246 ntTSL 2 BASIC20.53■□□□□ 0.88
RPGRIP1Q96KN7 AC002467.1-201ENST00000457510 657 ntTSL 3 BASIC20.53■□□□□ 0.88
RPGRIP1Q96KN7 AC012366.1-201ENST00000615411 473 ntTSL 5 BASIC20.53■□□□□ 0.88
RPGRIP1Q96KN7 OBP2B-205ENST00000618116 961 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
RPGRIP1Q96KN7 C1QTNF8-202ENST00000621771 897 ntTSL 5 BASIC20.53■□□□□ 0.88
RPGRIP1Q96KN7 IER3-202ENST00000376377 1350 ntBASIC20.53■□□□□ 0.88
RPGRIP1Q96KN7 ZNF385C-201ENST00000436535 1572 ntAPPRIS P1 TSL 5 BASIC20.53■□□□□ 0.88
RPGRIP1Q96KN7 CD7-206ENST00000583376 1659 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
RPGRIP1Q96KN7 RNH1-201ENST00000354420 1894 ntAPPRIS P1 TSL 5 BASIC20.53■□□□□ 0.88
RPGRIP1Q96KN7 ZNF419-207ENST00000442920 1857 ntAPPRIS ALT2 TSL 2 BASIC20.53■□□□□ 0.88
RPGRIP1Q96KN7 BICD1-207ENST00000551848 1962 ntBASIC20.53■□□□□ 0.88
RPGRIP1Q96KN7 BANP-223ENST00000538234 2372 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
RPGRIP1Q96KN7 RAB4A-205ENST00000618010 2799 ntTSL 3 BASIC20.53■□□□□ 0.88
RPGRIP1Q96KN7 RIN1-205ENST00000530056 2122 ntTSL 2 BASIC20.53■□□□□ 0.88
RPGRIP1Q96KN7 SLC25A3-201ENST00000188376 1909 ntAPPRIS ALT1 TSL 1 (best) BASIC20.53■□□□□ 0.88
RPGRIP1Q96KN7 PODNL1-203ENST00000538371 1826 ntAPPRIS ALT2 TSL 2 BASIC20.53■□□□□ 0.88
RPGRIP1Q96KN7 CFP-201ENST00000247153 1713 ntAPPRIS P2 TSL 5 BASIC20.53■□□□□ 0.88
RPGRIP1Q96KN7 CFAP77-203ENST00000393216 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
RPGRIP1Q96KN7 ETS1-208ENST00000535549 4594 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
RPGRIP1Q96KN7 CSPG5-202ENST00000383738 4161 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
RPGRIP1Q96KN7 CALM2-201ENST00000272298 1302 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
RPGRIP1Q96KN7 KMT5B-203ENST00000401547 2666 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
RPGRIP1Q96KN7 CPZ-202ENST00000360986 2267 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
RPGRIP1Q96KN7 CNNM3-202ENST00000377060 3308 ntTSL 2 BASIC20.52■□□□□ 0.88
RPGRIP1Q96KN7 NAPA-210ENST00000595227 1460 ntTSL 3 BASIC20.52■□□□□ 0.88
RPGRIP1Q96KN7 NOL3-211ENST00000568146 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
RPGRIP1Q96KN7 TLCD1-201ENST00000292090 1017 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
RPGRIP1Q96KN7 RXFP4-201ENST00000368318 1240 ntAPPRIS P1 BASIC20.52■□□□□ 0.88
RPGRIP1Q96KN7 AC004540.1-201ENST00000439120 891 ntTSL 2 BASIC20.52■□□□□ 0.88
RPGRIP1Q96KN7 FAM86EP-206ENST00000510506 987 ntBASIC20.52■□□□□ 0.88
RPGRIP1Q96KN7 AC138207.7-201ENST00000584499 668 ntTSL 5 BASIC20.52■□□□□ 0.88
RPGRIP1Q96KN7 AATF-208ENST00000619387 2141 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
RPGRIP1Q96KN7 ATRIP-201ENST00000320211 2590 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
RPGRIP1Q96KN7 CARD9-202ENST00000371734 1814 ntTSL 5 BASIC20.52■□□□□ 0.88
RPGRIP1Q96KN7 PQLC2-202ENST00000375155 1805 ntAPPRIS P1 TSL 2 BASIC20.52■□□□□ 0.88
RPGRIP1Q96KN7 MCIDAS-201ENST00000513312 1736 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
RPGRIP1Q96KN7 RALGPS1-208ENST00000424082 2362 ntTSL 2 BASIC20.52■□□□□ 0.88
RPGRIP1Q96KN7 FAM213B-205ENST00000444521 2827 ntAPPRIS ALT2 TSL 2 BASIC20.52■□□□□ 0.88
RPGRIP1Q96KN7 WNT5B-201ENST00000310594 2184 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
RPGRIP1Q96KN7 ZNF419-204ENST00000415379 2186 ntAPPRIS ALT2 TSL 2 BASIC20.52■□□□□ 0.88
RPGRIP1Q96KN7 MLST8-232ENST00000569417 1870 ntAPPRIS P3 TSL 1 (best) BASIC20.52■□□□□ 0.87
RPGRIP1Q96KN7 DDAH2-211ENST00000375787 1330 ntAPPRIS P1 TSL 5 BASIC20.52■□□□□ 0.87
RPGRIP1Q96KN7 MCCC1-215ENST00000629669 2316 ntTSL 5 BASIC20.52■□□□□ 0.87
RPGRIP1Q96KN7 PRR5-201ENST00000006251 1767 ntTSL 2 BASIC20.51■□□□□ 0.87
RPGRIP1Q96KN7 SKP2-208ENST00000546211 1589 ntTSL 5 BASIC20.51■□□□□ 0.87
RPGRIP1Q96KN7 FOXI3-201ENST00000428390 2804 ntAPPRIS P1 TSL 3 BASIC20.51■□□□□ 0.87
RPGRIP1Q96KN7 MAFF-207ENST00000538999 2365 ntTSL 2 BASIC20.51■□□□□ 0.87
RPGRIP1Q96KN7 MICU2-201ENST00000382374 1920 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
RPGRIP1Q96KN7 KANK4-204ENST00000371153 4665 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
RPGRIP1Q96KN7 SERPINH1-212ENST00000530284 1358 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
RPGRIP1Q96KN7 FO681492.1-203ENST00000622861 1362 ntAPPRIS ALT2 TSL 5 BASIC20.51■□□□□ 0.87
RPGRIP1Q96KN7 HNRNPUL1-203ENST00000378215 2864 ntTSL 2 BASIC20.51■□□□□ 0.87
RPGRIP1Q96KN7 NUP50-AS1-201ENST00000426282 2076 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
RPGRIP1Q96KN7 BCL2L10-201ENST00000260442 1249 ntAPPRIS P3 TSL 1 (best) BASIC20.51■□□□□ 0.87
RPGRIP1Q96KN7 PHYHD1-207ENST00000421063 1182 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
RPGRIP1Q96KN7 AC003982.1-201ENST00000477404 484 ntTSL 2 BASIC20.51■□□□□ 0.87
RPGRIP1Q96KN7 CHAC1-203ENST00000487220 853 ntTSL 3 BASIC20.51■□□□□ 0.87
RPGRIP1Q96KN7 AC098864.1-204ENST00000513752 805 ntTSL 4 BASIC20.51■□□□□ 0.87
RPGRIP1Q96KN7 RAB11B-AS1-201ENST00000593581 1013 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 65.4 ms