Protein–RNA interactions for Protein: Q96FZ7

CHMP6, Charged multivesicular body protein 6, humanhuman

Predictions only

Length 201 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP6Q96FZ7 C2orf69P4-201ENST00000565394 541 ntBASIC18.79■□□□□ 0.6
CHMP6Q96FZ7 LIMD2-202ENST00000578061 756 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
CHMP6Q96FZ7 CIRBP-211ENST00000586773 942 ntAPPRIS ALT1 TSL 2 BASIC18.79■□□□□ 0.6
CHMP6Q96FZ7 PARD6A-203ENST00000602551 1171 ntTSL 5 BASIC18.79■□□□□ 0.6
CHMP6Q96FZ7 TMEM230-210ENST00000612323 1231 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
CHMP6Q96FZ7 IL15RA-220ENST00000620345 1115 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
CHMP6Q96FZ7 MYO19-221ENST00000620640 1186 ntTSL 2 BASIC18.79■□□□□ 0.6
CHMP6Q96FZ7 SPESP1-201ENST00000310673 1431 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CHMP6Q96FZ7 SPECC1-203ENST00000395525 2536 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
CHMP6Q96FZ7 CYP2D7-203ENST00000433992 1740 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
CHMP6Q96FZ7 GLRB-201ENST00000264428 3126 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CHMP6Q96FZ7 SULT1A1-204ENST00000395609 1871 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CHMP6Q96FZ7 AC108860.2-201ENST00000562760 2183 ntBASIC18.79■□□□□ 0.6
CHMP6Q96FZ7 NOTCH3-201ENST00000263388 8666 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CHMP6Q96FZ7 SCARB1-208ENST00000544327 1812 ntTSL 5 BASIC18.79■□□□□ 0.6
CHMP6Q96FZ7 PCK2-205ENST00000558096 2433 ntTSL 2 BASIC18.79■□□□□ 0.6
CHMP6Q96FZ7 AC011474.1-201ENST00000582581 2582 ntTSL 2 BASIC18.79■□□□□ 0.6
CHMP6Q96FZ7 CHTOP-205ENST00000403433 1923 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
CHMP6Q96FZ7 MAP4K2-202ENST00000377350 2931 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
CHMP6Q96FZ7 AC079922.2-201ENST00000457336 2022 ntTSL 2 BASIC18.78■□□□□ 0.6
CHMP6Q96FZ7 TMEM74-201ENST00000297459 1741 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CHMP6Q96FZ7 AMACR-206ENST00000502637 1598 ntTSL 5 BASIC18.78■□□□□ 0.6
CHMP6Q96FZ7 ATRIP-203ENST00000357105 2403 ntTSL 2 BASIC18.78■□□□□ 0.6
CHMP6Q96FZ7 ST6GALNAC6-202ENST00000373141 2424 ntAPPRIS ALT1 TSL 2 BASIC18.78■□□□□ 0.6
CHMP6Q96FZ7 C6orf89-203ENST00000373685 1400 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
CHMP6Q96FZ7 BCL2L12-201ENST00000246784 990 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
CHMP6Q96FZ7 C19orf81-201ENST00000425202 765 ntAPPRIS P2 TSL 5 BASIC18.78■□□□□ 0.6
CHMP6Q96FZ7 OR10C1-204ENST00000622521 1039 ntBASIC18.78■□□□□ 0.6
CHMP6Q96FZ7 AC092437.1-201ENST00000624794 1048 ntBASIC18.78■□□□□ 0.6
CHMP6Q96FZ7 FBLIM1-202ENST00000375766 3695 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
CHMP6Q96FZ7 PCDHA5-202ENST00000529859 5218 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CHMP6Q96FZ7 MID1IP1-201ENST00000336949 2536 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CHMP6Q96FZ7 TYMS-203ENST00000323274 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CHMP6Q96FZ7 TPST2-201ENST00000338754 5697 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CHMP6Q96FZ7 RAI2-201ENST00000331511 2317 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
CHMP6Q96FZ7 NBL1-210ENST00000615215 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
CHMP6Q96FZ7 EMILIN3-201ENST00000332312 3796 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CHMP6Q96FZ7 HR-201ENST00000312841 5351 ntTSL 5 BASIC18.78■□□□□ 0.6
CHMP6Q96FZ7 ACBD4-202ENST00000376955 1453 ntTSL 2 BASIC18.77■□□□□ 0.6
CHMP6Q96FZ7 DMKN-207ENST00000419602 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
CHMP6Q96FZ7 EPN2-212ENST00000575595 1491 ntTSL 2 BASIC18.77■□□□□ 0.6
CHMP6Q96FZ7 DOC2B-203ENST00000613549 6048 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
CHMP6Q96FZ7 ZDHHC16-202ENST00000352634 1718 ntAPPRIS ALT1 TSL 1 (best) BASIC18.77■□□□□ 0.6
CHMP6Q96FZ7 SCARB2-201ENST00000264896 4792 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.6
CHMP6Q96FZ7 MREG-201ENST00000263268 1314 ntAPPRIS P1 TSL 2 BASIC18.77■□□□□ 0.6
CHMP6Q96FZ7 TMEM176B-203ENST00000434545 1303 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
CHMP6Q96FZ7 CD58-203ENST00000457047 1328 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
CHMP6Q96FZ7 ACSL6-205ENST00000379246 2622 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
CHMP6Q96FZ7 ST8SIA5-201ENST00000315087 2716 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
CHMP6Q96FZ7 PSMD6-201ENST00000295901 1430 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
CHMP6Q96FZ7 AC074212.1-201ENST00000559756 1402 ntTSL 3 BASIC18.77■□□□□ 0.6
CHMP6Q96FZ7 NR2F1-205ENST00000615873 1427 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
CHMP6Q96FZ7 ZNF589-203ENST00000427617 1677 ntTSL 2 BASIC18.77■□□□□ 0.6
CHMP6Q96FZ7 ISM1-201ENST00000262487 2593 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.6
CHMP6Q96FZ7 WIPI2-201ENST00000288828 4476 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
CHMP6Q96FZ7 GGTLC1-201ENST00000278765 974 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
CHMP6Q96FZ7 CFD-201ENST00000327726 1201 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
CHMP6Q96FZ7 SLC22A15-201ENST00000369502 1230 ntTSL 2 BASIC18.77■□□□□ 0.6
CHMP6Q96FZ7 GPX1-202ENST00000419783 1146 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.6
CHMP6Q96FZ7 ZCCHC9-204ENST00000438268 1248 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
CHMP6Q96FZ7 LINC02091-201ENST00000576171 1185 ntTSL 5 BASIC18.77■□□□□ 0.6
CHMP6Q96FZ7 CYP2T3P-201ENST00000601990 817 ntBASIC18.77■□□□□ 0.6
CHMP6Q96FZ7 AC243773.2-201ENST00000616341 490 ntTSL 2 BASIC18.77■□□□□ 0.6
CHMP6Q96FZ7 AC073111.5-205ENST00000641717 521 ntBASIC18.77■□□□□ 0.6
CHMP6Q96FZ7 MFSD10-202ENST00000355443 1753 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
CHMP6Q96FZ7 ITGB4-201ENST00000200181 5919 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
CHMP6Q96FZ7 SEL1L3-202ENST00000399878 4520 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
CHMP6Q96FZ7 TPD52L1-202ENST00000368388 2147 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
CHMP6Q96FZ7 VPS51-201ENST00000279281 2714 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.59
CHMP6Q96FZ7 BZW1-209ENST00000452790 1473 ntTSL 2 BASIC18.77■□□□□ 0.59
CHMP6Q96FZ7 OR6D1P-202ENST00000641007 5290 ntBASIC18.77■□□□□ 0.59
CHMP6Q96FZ7 CCDC184-201ENST00000316554 2343 ntAPPRIS P1 BASIC18.77■□□□□ 0.59
CHMP6Q96FZ7 HNF1B-202ENST00000614313 1819 ntTSL 5 BASIC18.77■□□□□ 0.59
CHMP6Q96FZ7 HNF1B-203ENST00000617272 1820 ntTSL 1 (best) BASIC18.77■□□□□ 0.59
CHMP6Q96FZ7 EVI5L-202ENST00000538904 2418 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CHMP6Q96FZ7 COL4A2-201ENST00000360467 6281 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
CHMP6Q96FZ7 HOTTIP-202ENST00000472494 2285 ntTSL 2 BASIC18.76■□□□□ 0.59
CHMP6Q96FZ7 OGG1-201ENST00000302003 1655 ntAPPRIS P4 TSL 1 (best) BASIC18.76■□□□□ 0.59
CHMP6Q96FZ7 KCNQ1-201ENST00000155840 3245 ntAPPRIS P2 TSL 1 (best) BASIC18.76■□□□□ 0.59
CHMP6Q96FZ7 RNASET2-203ENST00000366855 1417 ntTSL 5 BASIC18.76■□□□□ 0.59
CHMP6Q96FZ7 CPT2-210ENST00000637252 2739 ntTSL 5 BASIC18.76■□□□□ 0.59
CHMP6Q96FZ7 PFN2-203ENST00000452853 1780 ntAPPRIS ALT1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CHMP6Q96FZ7 CCDC177-201ENST00000599174 4131 ntAPPRIS P1 TSL 3 BASIC18.76■□□□□ 0.59
CHMP6Q96FZ7 DNAJA3-202ENST00000355296 2591 ntAPPRIS ALT1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CHMP6Q96FZ7 LRRC20-203ENST00000358141 2924 ntTSL 2 BASIC18.76■□□□□ 0.59
CHMP6Q96FZ7 FTCDNL1-204ENST00000622774 1997 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
CHMP6Q96FZ7 AC009093.4-201ENST00000567984 561 ntTSL 4 BASIC18.76■□□□□ 0.59
CHMP6Q96FZ7 PET100-202ENST00000594797 719 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CHMP6Q96FZ7 LINC00472-203ENST00000426635 2958 ntTSL 2 BASIC18.76■□□□□ 0.59
CHMP6Q96FZ7 AD000864.1-201ENST00000624076 2295 ntBASIC18.76■□□□□ 0.59
CHMP6Q96FZ7 SORT1-201ENST00000256637 7028 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CHMP6Q96FZ7 PHF20L1-201ENST00000220847 3297 ntTSL 5 BASIC18.76■□□□□ 0.59
CHMP6Q96FZ7 GOLGA2P9-203ENST00000600260 2033 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
CHMP6Q96FZ7 SLC8A3-202ENST00000356921 5250 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
CHMP6Q96FZ7 TNFSF9-201ENST00000245817 1665 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CHMP6Q96FZ7 SCYL1-202ENST00000279270 1659 ntTSL 5 BASIC18.76■□□□□ 0.59
CHMP6Q96FZ7 JKAMP-215ENST00000616435 2338 ntTSL 5 BASIC18.75■□□□□ 0.59
CHMP6Q96FZ7 FLYWCH1P1-201ENST00000460917 1874 ntBASIC18.75■□□□□ 0.59
CHMP6Q96FZ7 AC093677.2-201ENST00000600169 1863 ntBASIC18.75■□□□□ 0.59
CHMP6Q96FZ7 DAPK1-207ENST00000469640 5899 ntTSL 5 BASIC18.75■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 18.7 ms