Protein–RNA interactions for Protein: Q96CX6

LRRC58, Leucine-rich repeat-containing protein 58, humanhuman

Predictions only

Length 371 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC58Q96CX6 C5orf49-202ENST00000509627 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
LRRC58Q96CX6 EXOSC4-202ENST00000525936 606 ntTSL 3 BASIC17.76■□□□□ 0.43
LRRC58Q96CX6 AC091138.1-202ENST00000578967 457 ntTSL 2 BASIC17.76■□□□□ 0.43
LRRC58Q96CX6 ZNF667-AS1-206ENST00000591797 535 ntTSL 5 BASIC17.76■□□□□ 0.43
LRRC58Q96CX6 PRSS36-201ENST00000268281 2840 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
LRRC58Q96CX6 ATP6V0B-213ENST00000532642 1685 ntTSL 2 BASIC17.76■□□□□ 0.43
LRRC58Q96CX6 TCEA1-208ENST00000521604 2858 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
LRRC58Q96CX6 CSAD-209ENST00000453446 1774 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
LRRC58Q96CX6 FZD10-201ENST00000229030 3281 ntAPPRIS P1 BASIC17.76■□□□□ 0.43
LRRC58Q96CX6 CRYZL1-203ENST00000381540 1482 ntTSL 2 BASIC17.75■□□□□ 0.43
LRRC58Q96CX6 QTRT1-201ENST00000250237 1317 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
LRRC58Q96CX6 COMMD7-202ENST00000446419 1343 ntAPPRIS ALT1 TSL 2 BASIC17.75■□□□□ 0.43
LRRC58Q96CX6 CCNI2-201ENST00000378731 2355 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
LRRC58Q96CX6 NIPAL2-202ENST00000430223 4496 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
LRRC58Q96CX6 TSLP-203ENST00000420978 2621 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
LRRC58Q96CX6 ZYG11A-203ENST00000612017 3682 ntTSL 5 BASIC17.75■□□□□ 0.43
LRRC58Q96CX6 SPPL2C-201ENST00000329196 2238 ntAPPRIS P1 BASIC17.75■□□□□ 0.43
LRRC58Q96CX6 AL357033.4-201ENST00000617703 1807 ntBASIC17.75■□□□□ 0.43
LRRC58Q96CX6 CCM2-207ENST00000475551 2471 ntAPPRIS ALT2 TSL 2 BASIC17.75■□□□□ 0.43
LRRC58Q96CX6 DAG1-219ENST00000538711 5582 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
LRRC58Q96CX6 EIF3C-211ENST00000566866 2986 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
LRRC58Q96CX6 HR-202ENST00000381418 6336 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
LRRC58Q96CX6 FAM234A-203ENST00000399932 3213 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
LRRC58Q96CX6 SLX1B-SULT1A4-201ENST00000344620 2424 ntTSL 2 BASIC17.75■□□□□ 0.43
LRRC58Q96CX6 XXYLT1-202ENST00000356740 564 ntTSL 2 BASIC17.75■□□□□ 0.43
LRRC58Q96CX6 AC079145.1-201ENST00000416575 541 ntTSL 2 BASIC17.75■□□□□ 0.43
LRRC58Q96CX6 TRNT1-207ENST00000420393 854 ntTSL 3 BASIC17.75■□□□□ 0.43
LRRC58Q96CX6 NCBP2-207ENST00000452404 1133 ntTSL 2 BASIC17.75■□□□□ 0.43
LRRC58Q96CX6 LINC00595-207ENST00000476909 792 ntTSL 2 BASIC17.75■□□□□ 0.43
LRRC58Q96CX6 AC008667.2-201ENST00000504413 469 ntTSL 3 BASIC17.75■□□□□ 0.43
LRRC58Q96CX6 TK2-208ENST00000545043 1120 ntTSL 2 BASIC17.75■□□□□ 0.43
LRRC58Q96CX6 Z97986.1-201ENST00000565879 476 ntTSL 5 BASIC17.75■□□□□ 0.43
LRRC58Q96CX6 PSME3-210ENST00000590720 998 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
LRRC58Q96CX6 L34079.3-201ENST00000600242 546 ntTSL 4 BASIC17.75■□□□□ 0.43
LRRC58Q96CX6 WT1-AS_3.1-201ENST00000613262 234 ntBASIC17.75■□□□□ 0.43
LRRC58Q96CX6 HDAC10-201ENST00000216271 2687 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
LRRC58Q96CX6 STX3-201ENST00000337979 3299 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
LRRC58Q96CX6 THEG-201ENST00000342640 1877 ntAPPRIS P4 TSL 1 (best) BASIC17.75■□□□□ 0.43
LRRC58Q96CX6 PITX3-201ENST00000370002 1391 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
LRRC58Q96CX6 RPS6KA5-201ENST00000418736 2249 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
LRRC58Q96CX6 SLC39A1-210ENST00000617697 2214 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
LRRC58Q96CX6 CYP2D7-207ENST00000612115 1734 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
LRRC58Q96CX6 FBXL5-202ENST00000412094 2837 ntAPPRIS ALT1 TSL 1 (best) BASIC17.75■□□□□ 0.43
LRRC58Q96CX6 GCSH-201ENST00000315467 1597 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
LRRC58Q96CX6 NEXN-AS1-201ENST00000421331 2292 ntTSL 2 BASIC17.74■□□□□ 0.43
LRRC58Q96CX6 SCYL1-202ENST00000279270 1659 ntTSL 5 BASIC17.74■□□□□ 0.43
LRRC58Q96CX6 IGLON5-201ENST00000270642 2606 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
LRRC58Q96CX6 C14orf180-202ENST00000410013 2009 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
LRRC58Q96CX6 PROSER2-201ENST00000277570 3333 ntAPPRIS P2 TSL 1 (best) BASIC17.74■□□□□ 0.43
LRRC58Q96CX6 SREBF2-201ENST00000361204 5240 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
LRRC58Q96CX6 HEXIM2-201ENST00000307275 1528 ntAPPRIS P1 TSL 2 BASIC17.74■□□□□ 0.43
LRRC58Q96CX6 IRAK3-202ENST00000457197 1853 ntTSL 2 BASIC17.74■□□□□ 0.43
LRRC58Q96CX6 CARNS1-202ENST00000445895 3971 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
LRRC58Q96CX6 HS3ST2-201ENST00000261374 2314 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
LRRC58Q96CX6 SLC27A5-207ENST00000601355 1987 ntAPPRIS ALT2 TSL 2 BASIC17.74■□□□□ 0.43
LRRC58Q96CX6 ZNF655-202ENST00000320583 1601 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
LRRC58Q96CX6 TM2D2-201ENST00000397070 1631 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
LRRC58Q96CX6 ID1-201ENST00000376105 1233 ntBASIC17.74■□□□□ 0.43
LRRC58Q96CX6 NCF1B-203ENST00000435988 1254 ntBASIC17.74■□□□□ 0.43
LRRC58Q96CX6 THEM4-205ENST00000489410 643 ntTSL 2 BASIC17.74■□□□□ 0.43
LRRC58Q96CX6 GLRB-205ENST00000512619 728 ntTSL 3 BASIC17.74■□□□□ 0.43
LRRC58Q96CX6 PLEKHB1-216ENST00000543085 632 ntTSL 3 BASIC17.74■□□□□ 0.43
LRRC58Q96CX6 RNASEK-202ENST00000548577 810 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
LRRC58Q96CX6 FFAR3-202ENST00000594310 1182 ntAPPRIS P1 BASIC17.74■□□□□ 0.43
LRRC58Q96CX6 AC004264.1-201ENST00000608354 794 ntBASIC17.74■□□□□ 0.43
LRRC58Q96CX6 PFKL-212ENST00000628044 129 ntTSL 3 BASIC17.74■□□□□ 0.43
LRRC58Q96CX6 SOX15-201ENST00000250055 1396 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
LRRC58Q96CX6 LINC02361-201ENST00000538731 1484 ntTSL 2 BASIC17.74■□□□□ 0.43
LRRC58Q96CX6 P2RY6-202ENST00000393590 2398 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
LRRC58Q96CX6 MTHFD2L-203ENST00000395759 2354 ntAPPRIS P2 TSL 5 BASIC17.74■□□□□ 0.43
LRRC58Q96CX6 ACOXL-205ENST00000439055 2373 ntTSL 2 BASIC17.74■□□□□ 0.43
LRRC58Q96CX6 ANKS1A-201ENST00000360359 6347 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
LRRC58Q96CX6 TADA3-202ENST00000343450 2554 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
LRRC58Q96CX6 SLC2A14-214ENST00000542505 1650 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
LRRC58Q96CX6 ZNF746-202ENST00000458143 3797 ntAPPRIS ALT2 TSL 2 BASIC17.74■□□□□ 0.43
LRRC58Q96CX6 ATRIP-203ENST00000357105 2403 ntTSL 2 BASIC17.73■□□□□ 0.43
LRRC58Q96CX6 GRAMD2B-218ENST00000542322 2977 ntTSL 2 BASIC17.73■□□□□ 0.43
LRRC58Q96CX6 DDX51-202ENST00000397333 4718 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
LRRC58Q96CX6 ETV7-205ENST00000538992 1434 ntTSL 2 BASIC17.73■□□□□ 0.43
LRRC58Q96CX6 KRT81-202ENST00000615839 1505 ntAPPRIS ALT2 TSL 5 BASIC17.73■□□□□ 0.43
LRRC58Q96CX6 EML3-212ENST00000494176 2901 ntTSL 2 BASIC17.73■□□□□ 0.43
LRRC58Q96CX6 EML3-216ENST00000529309 2909 ntTSL 2 BASIC17.73■□□□□ 0.43
LRRC58Q96CX6 KDM1A-201ENST00000356634 3033 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
LRRC58Q96CX6 DVL2-209ENST00000575458 2659 ntAPPRIS ALT2 TSL 2 BASIC17.73■□□□□ 0.43
LRRC58Q96CX6 RAMP2-201ENST00000253796 780 ntAPPRIS P2 TSL 1 (best) BASIC17.73■□□□□ 0.43
LRRC58Q96CX6 Z85996.1-201ENST00000494644 937 ntBASIC17.73■□□□□ 0.43
LRRC58Q96CX6 UNC93B4-201ENST00000505679 747 ntBASIC17.73■□□□□ 0.43
LRRC58Q96CX6 PPP1R14BP3-201ENST00000509033 445 ntBASIC17.73■□□□□ 0.43
LRRC58Q96CX6 MAZ-215ENST00000569978 567 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
LRRC58Q96CX6 MAGIX-202ENST00000595224 1238 ntAPPRIS P2 TSL 5 BASIC17.73■□□□□ 0.43
LRRC58Q96CX6 RNPS1-202ENST00000320225 2241 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
LRRC58Q96CX6 SNAP91-201ENST00000195649 4434 ntAPPRIS ALT2 TSL 5 BASIC17.73■□□□□ 0.43
LRRC58Q96CX6 SNAP91-204ENST00000369694 4449 ntAPPRIS P2 TSL 5 BASIC17.73■□□□□ 0.43
LRRC58Q96CX6 KLHDC10-201ENST00000335420 6437 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
LRRC58Q96CX6 ACAA1-209ENST00000450296 1570 ntTSL 5 BASIC17.73■□□□□ 0.43
LRRC58Q96CX6 CADPS2-201ENST00000313070 6065 ntTSL 5 BASIC17.73■□□□□ 0.43
LRRC58Q96CX6 RGS20-203ENST00000344277 1667 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
LRRC58Q96CX6 RALY-203ENST00000375114 6430 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
LRRC58Q96CX6 CCDC137-201ENST00000329214 2468 ntAPPRIS P2 TSL 1 (best) BASIC17.73■□□□□ 0.43
LRRC58Q96CX6 KRT8P3-201ENST00000519669 1449 ntBASIC17.72■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 48.4 ms