Protein–RNA interactions for Protein: Q8WVI0

SMIM4, Small integral membrane protein 4, humanhuman

Predictions only

Length 70 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM4Q8WVI0 CD14-201ENST00000302014 1886 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
SMIM4Q8WVI0 KIFC3-203ENST00000445690 3379 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
SMIM4Q8WVI0 AL138828.1-202ENST00000576956 1881 ntTSL 5 BASIC15.95■□□□□ 0.14
SMIM4Q8WVI0 CCDC177-201ENST00000599174 4131 ntAPPRIS P1 TSL 3 BASIC15.95■□□□□ 0.14
SMIM4Q8WVI0 HMGXB3-201ENST00000502717 4974 ntAPPRIS P2 TSL 1 (best) BASIC15.95■□□□□ 0.14
SMIM4Q8WVI0 RNASEH2C-203ENST00000528220 1337 ntTSL 2 BASIC15.94■□□□□ 0.14
SMIM4Q8WVI0 SLC12A9-215ENST00000540482 2269 ntTSL 2 BASIC15.94■□□□□ 0.14
SMIM4Q8WVI0 KRT8P45-201ENST00000414328 1447 ntBASIC15.94■□□□□ 0.14
SMIM4Q8WVI0 HSPB2-C11orf52-202ENST00000534100 1521 ntAPPRIS ALT2 TSL 2 BASIC15.94■□□□□ 0.14
SMIM4Q8WVI0 PDE4A-201ENST00000293683 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC15.94■□□□□ 0.14
SMIM4Q8WVI0 PRELID3A-201ENST00000336990 1715 ntAPPRIS P1 TSL 2 BASIC15.94■□□□□ 0.14
SMIM4Q8WVI0 MAPKAP1-208ENST00000394063 2977 ntTSL 5 BASIC15.94■□□□□ 0.14
SMIM4Q8WVI0 WASF1-202ENST00000359451 3075 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
SMIM4Q8WVI0 BPHL-203ENST00000380379 1928 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
SMIM4Q8WVI0 C18orf8-208ENST00000590868 2002 ntTSL 2 BASIC15.94■□□□□ 0.14
SMIM4Q8WVI0 AC008556.1-201ENST00000610908 2040 ntBASIC15.94■□□□□ 0.14
SMIM4Q8WVI0 TBC1D2-202ENST00000375063 2100 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
SMIM4Q8WVI0 FGFR1-206ENST00000397091 5702 ntAPPRIS ALT1 TSL 1 (best) BASIC15.94■□□□□ 0.14
SMIM4Q8WVI0 HDAC10-222ENST00000626012 2607 ntTSL 5 BASIC15.94■□□□□ 0.14
SMIM4Q8WVI0 CYC1-201ENST00000318911 1240 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
SMIM4Q8WVI0 RTCA-202ENST00000370126 538 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
SMIM4Q8WVI0 RER1-204ENST00000378518 522 ntTSL 3 BASIC15.94■□□□□ 0.14
SMIM4Q8WVI0 MAX-217ENST00000557277 728 ntTSL 3 BASIC15.94■□□□□ 0.14
SMIM4Q8WVI0 AC005829.2-201ENST00000571422 1056 ntBASIC15.94■□□□□ 0.14
SMIM4Q8WVI0 GOSR2-208ENST00000573224 1115 ntTSL 5 BASIC15.94■□□□□ 0.14
SMIM4Q8WVI0 TM7SF2-202ENST00000345348 1490 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
SMIM4Q8WVI0 C18orf21-205ENST00000592875 1581 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
SMIM4Q8WVI0 KRT8-201ENST00000293308 1882 ntAPPRIS P1 TSL 5 BASIC15.94■□□□□ 0.14
SMIM4Q8WVI0 TCP11-204ENST00000373979 1882 ntAPPRIS P3 TSL 5 BASIC15.94■□□□□ 0.14
SMIM4Q8WVI0 KDELC1-201ENST00000376004 2060 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
SMIM4Q8WVI0 CD24-201ENST00000606017 2180 ntAPPRIS P3 TSL 1 (best) BASIC15.94■□□□□ 0.14
SMIM4Q8WVI0 CERCAM-201ENST00000372838 2685 ntAPPRIS P3 TSL 1 (best) BASIC15.94■□□□□ 0.14
SMIM4Q8WVI0 DBN1-201ENST00000292385 3072 ntAPPRIS P4 TSL 1 (best) BASIC15.94■□□□□ 0.14
SMIM4Q8WVI0 INPP4A-204ENST00000409540 3231 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
SMIM4Q8WVI0 RNF112-201ENST00000461366 3212 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
SMIM4Q8WVI0 YARS2-201ENST00000324868 2122 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
SMIM4Q8WVI0 TBKBP1-204ENST00000622396 2010 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
SMIM4Q8WVI0 A4GALT-202ENST00000381278 1935 ntAPPRIS P1 TSL 5 BASIC15.94■□□□□ 0.14
SMIM4Q8WVI0 CLASRP-203ENST00000391953 1941 ntTSL 2 BASIC15.94■□□□□ 0.14
SMIM4Q8WVI0 PER3-203ENST00000377541 1524 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
SMIM4Q8WVI0 OSR2-210ENST00000523368 1519 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
SMIM4Q8WVI0 CCNO-201ENST00000282572 1433 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
SMIM4Q8WVI0 LINC02028-204ENST00000449350 1419 ntTSL 3 BASIC15.94■□□□□ 0.14
SMIM4Q8WVI0 USP7-201ENST00000344836 5412 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
SMIM4Q8WVI0 PML-211ENST00000564428 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC15.93■□□□□ 0.14
SMIM4Q8WVI0 PCCB-208ENST00000468777 1877 ntAPPRIS ALT2 TSL 3 BASIC15.93■□□□□ 0.14
SMIM4Q8WVI0 CXXC5-211ENST00000511048 1892 ntAPPRIS P1 TSL 2 BASIC15.93■□□□□ 0.14
SMIM4Q8WVI0 ACSS2-201ENST00000253382 2925 ntTSL 2 BASIC15.93■□□□□ 0.14
SMIM4Q8WVI0 VSIG10L2-202ENST00000638636 2304 ntAPPRIS P1 TSL 5 BASIC15.93■□□□□ 0.14
SMIM4Q8WVI0 RASGRP2-203ENST00000377486 667 ntTSL 3 BASIC15.93■□□□□ 0.14
SMIM4Q8WVI0 TUBB8P6-201ENST00000436895 1288 ntBASIC15.93■□□□□ 0.14
SMIM4Q8WVI0 AC116614.1-201ENST00000456949 539 ntTSL 2 BASIC15.93■□□□□ 0.14
SMIM4Q8WVI0 TRIM35-203ENST00000521253 1215 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
SMIM4Q8WVI0 DBI-210ENST00000542275 757 ntTSL 5 BASIC15.93■□□□□ 0.14
SMIM4Q8WVI0 SLC23A3-203ENST00000409878 2010 ntAPPRIS P1 TSL 2 BASIC15.93■□□□□ 0.14
SMIM4Q8WVI0 ALDH5A1-202ENST00000357578 5248 ntAPPRIS ALT2 TSL 1 (best) BASIC15.93■□□□□ 0.14
SMIM4Q8WVI0 DOK4-201ENST00000340099 2772 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
SMIM4Q8WVI0 AP2M1-201ENST00000292807 1931 ntAPPRIS P4 TSL 5 BASIC15.93■□□□□ 0.14
SMIM4Q8WVI0 ZNF420-201ENST00000304239 1945 ntTSL 2 BASIC15.93■□□□□ 0.14
SMIM4Q8WVI0 CCDC154-202ENST00000409671 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC15.93■□□□□ 0.14
SMIM4Q8WVI0 WT1-201ENST00000332351 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC15.93■□□□□ 0.14
SMIM4Q8WVI0 TCF3-204ENST00000453954 3585 ntTSL 5 BASIC15.93■□□□□ 0.14
SMIM4Q8WVI0 USH1C-205ENST00000527020 2159 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
SMIM4Q8WVI0 FOSB-209ENST00000590335 2170 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
SMIM4Q8WVI0 RIMS4-201ENST00000372851 5203 ntAPPRIS P3 TSL 1 (best) BASIC15.93■□□□□ 0.14
SMIM4Q8WVI0 ACAA1-201ENST00000301810 1540 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
SMIM4Q8WVI0 CPT2-210ENST00000637252 2739 ntTSL 5 BASIC15.93■□□□□ 0.14
SMIM4Q8WVI0 LINC01569-202ENST00000573042 2093 ntTSL 2 BASIC15.93■□□□□ 0.14
SMIM4Q8WVI0 TMEM176B-203ENST00000434545 1303 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
SMIM4Q8WVI0 CLCN2-204ENST00000434054 2897 ntAPPRIS ALT2 TSL 2 BASIC15.93■□□□□ 0.14
SMIM4Q8WVI0 WDR13-201ENST00000218056 2124 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
SMIM4Q8WVI0 CTSA-204ENST00000372484 2149 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
SMIM4Q8WVI0 ATP6V1G2-205ENST00000303892 1588 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
SMIM4Q8WVI0 RGN-204ENST00000457380 2041 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
SMIM4Q8WVI0 HIBCH-201ENST00000359678 1939 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
SMIM4Q8WVI0 TBP-202ENST00000392092 1903 ntAPPRIS P3 TSL 1 (best) BASIC15.92■□□□□ 0.14
SMIM4Q8WVI0 PPP2R5B-201ENST00000164133 2745 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
SMIM4Q8WVI0 PIP5K1A-207ENST00000441902 2297 ntTSL 2 BASIC15.92■□□□□ 0.14
SMIM4Q8WVI0 DMRTA1-201ENST00000325870 5569 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
SMIM4Q8WVI0 PACSIN2-205ENST00000407585 3080 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
SMIM4Q8WVI0 PSRC1-205ENST00000409138 1826 ntTSL 2 BASIC15.92■□□□□ 0.14
SMIM4Q8WVI0 EXOC5-201ENST00000340918 2632 ntTSL 2 BASIC15.92■□□□□ 0.14
SMIM4Q8WVI0 SIRT3-202ENST00000524564 1395 ntTSL 2 BASIC15.92■□□□□ 0.14
SMIM4Q8WVI0 ACBD3-201ENST00000366812 3573 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
SMIM4Q8WVI0 PTP4A3-201ENST00000329397 2785 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
SMIM4Q8WVI0 ZNF644-203ENST00000361321 1253 ntTSL 2 BASIC15.92■□□□□ 0.14
SMIM4Q8WVI0 ART5-202ENST00000397067 1154 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
SMIM4Q8WVI0 SPAG16-207ENST00000432529 1250 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
SMIM4Q8WVI0 CALM1-203ENST00000544280 1064 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
SMIM4Q8WVI0 AC073896.1-201ENST00000549318 937 ntAPPRIS P1 TSL 5 BASIC15.92■□□□□ 0.14
SMIM4Q8WVI0 DUX4L16-201ENST00000555130 1264 ntBASIC15.92■□□□□ 0.14
SMIM4Q8WVI0 IDH2-203ENST00000559482 1278 ntTSL 5 BASIC15.92■□□□□ 0.14
SMIM4Q8WVI0 AL121906.2-201ENST00000621597 723 ntBASIC15.92■□□□□ 0.14
SMIM4Q8WVI0 OR10C1-204ENST00000622521 1039 ntBASIC15.92■□□□□ 0.14
SMIM4Q8WVI0 RABEPK-202ENST00000373538 1504 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
SMIM4Q8WVI0 CCDC112-205ENST00000506442 2145 ntAPPRIS ALT2 TSL 2 BASIC15.92■□□□□ 0.14
SMIM4Q8WVI0 ZNF623-201ENST00000458270 2733 ntAPPRIS ALT2 TSL 1 (best) BASIC15.92■□□□□ 0.14
SMIM4Q8WVI0 IL27RA-201ENST00000263379 2962 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
SMIM4Q8WVI0 SAE1-201ENST00000270225 2049 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
SMIM4Q8WVI0 RASL10B-201ENST00000603017 3205 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Retrieved 100 of 98,524 protein–RNA pairs in 30 ms