Protein–RNA interactions for Protein: Q8WV60

PTCD2, Pentatricopeptide repeat-containing protein 2, mitochondrial, humanhuman

Known RBP Predictions only

Length 388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD2Q8WV60 MYEOV-201ENST00000308946 2287 ntAPPRIS P3 TSL 1 (best) BASIC18.89■□□□□ 0.61
PTCD2Q8WV60 ANKS3-202ENST00000446014 2265 ntTSL 5 BASIC18.89■□□□□ 0.61
PTCD2Q8WV60 ZNRF3-203ENST00000544604 6851 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
PTCD2Q8WV60 PGR-201ENST00000263463 2496 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
PTCD2Q8WV60 PDIA5-201ENST00000316218 1799 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
PTCD2Q8WV60 TRIM63-201ENST00000374272 1770 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
PTCD2Q8WV60 BSG-201ENST00000333511 1974 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
PTCD2Q8WV60 AC135782.1-201ENST00000537498 2154 ntTSL 2 BASIC18.88■□□□□ 0.61
PTCD2Q8WV60 RIMBP3C-201ENST00000331505 5475 ntAPPRIS ALT2 BASIC18.88■□□□□ 0.61
PTCD2Q8WV60 NUDT4-202ENST00000415493 4839 ntAPPRIS ALT1 TSL 1 (best) BASIC18.88■□□□□ 0.61
PTCD2Q8WV60 TERF1P1-201ENST00000311003 1181 ntBASIC18.88■□□□□ 0.61
PTCD2Q8WV60 BEX3-204ENST00000372645 913 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
PTCD2Q8WV60 AC113347.1-201ENST00000413321 391 ntBASIC18.88■□□□□ 0.61
PTCD2Q8WV60 SHBG-203ENST00000416273 1042 ntAPPRIS ALT2 TSL 3 BASIC18.88■□□□□ 0.61
PTCD2Q8WV60 CYB561D2-204ENST00000424512 1212 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
PTCD2Q8WV60 AL050404.1-201ENST00000424566 802 ntTSL 2 BASIC18.88■□□□□ 0.61
PTCD2Q8WV60 HMGB3P22-201ENST00000442010 597 ntTSL 2 BASIC18.88■□□□□ 0.61
PTCD2Q8WV60 SLC25A3P1-201ENST00000443844 931 ntBASIC18.88■□□□□ 0.61
PTCD2Q8WV60 AC090142.2-201ENST00000483263 416 ntBASIC18.88■□□□□ 0.61
PTCD2Q8WV60 LY6E-211ENST00000521699 1256 ntAPPRIS P2 TSL 5 BASIC18.88■□□□□ 0.61
PTCD2Q8WV60 SLC52A2-205ENST00000526752 710 ntTSL 3 BASIC18.88■□□□□ 0.61
PTCD2Q8WV60 OAF-202ENST00000531220 815 ntAPPRIS ALT2 TSL 3 BASIC18.88■□□□□ 0.61
PTCD2Q8WV60 EGLN1P1-201ENST00000531623 762 ntBASIC18.88■□□□□ 0.61
PTCD2Q8WV60 SHBG-215ENST00000575903 1196 ntTSL 3 BASIC18.88■□□□□ 0.61
PTCD2Q8WV60 KRT18P22-201ENST00000402024 1347 ntBASIC18.88■□□□□ 0.61
PTCD2Q8WV60 CDX1-202ENST00000616154 1343 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
PTCD2Q8WV60 AC087457.1-201ENST00000503496 2727 ntTSL 2 BASIC18.88■□□□□ 0.61
PTCD2Q8WV60 MTA1-201ENST00000331320 2876 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
PTCD2Q8WV60 PER3-203ENST00000377541 1524 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
PTCD2Q8WV60 ATP6V1G2-205ENST00000303892 1588 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
PTCD2Q8WV60 CAMK4-210ENST00000512453 1640 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
PTCD2Q8WV60 HAUS4-218ENST00000555986 1626 ntTSL 5 BASIC18.88■□□□□ 0.61
PTCD2Q8WV60 HOXB6-201ENST00000225648 1660 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
PTCD2Q8WV60 KRAS-203ENST00000556131 1696 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
PTCD2Q8WV60 MTERF2-202ENST00000392830 1763 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
PTCD2Q8WV60 CLN8-211ENST00000636934 1790 ntTSL 5 BASIC18.88■□□□□ 0.61
PTCD2Q8WV60 ZNF420-201ENST00000304239 1945 ntTSL 2 BASIC18.88■□□□□ 0.61
PTCD2Q8WV60 CLK1-205ENST00000434813 2026 ntTSL 2 BASIC18.88■□□□□ 0.61
PTCD2Q8WV60 CPEB2-207ENST00000507071 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
PTCD2Q8WV60 SNX4-201ENST00000251775 2513 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
PTCD2Q8WV60 PTPRJ-207ENST00000613246 7851 ntAPPRIS ALT2 TSL 5 BASIC18.87■□□□□ 0.61
PTCD2Q8WV60 ACSS3-201ENST00000261206 2666 ntAPPRIS ALT1 TSL 1 (best) BASIC18.87■□□□□ 0.61
PTCD2Q8WV60 TBC1D2B-202ENST00000409931 6086 ntAPPRIS P3 TSL 1 (best) BASIC18.87■□□□□ 0.61
PTCD2Q8WV60 CTSA-201ENST00000191018 1898 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
PTCD2Q8WV60 METTL5-201ENST00000260953 1010 ntAPPRIS P2 TSL 1 (best) BASIC18.87■□□□□ 0.61
PTCD2Q8WV60 CHCHD6-201ENST00000290913 1006 ntAPPRIS P2 TSL 1 (best) BASIC18.87■□□□□ 0.61
PTCD2Q8WV60 SERPINA4-201ENST00000298841 1784 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
PTCD2Q8WV60 TRIM61-201ENST00000329314 1582 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
PTCD2Q8WV60 LRRC36-201ENST00000329956 2395 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
PTCD2Q8WV60 CLN3-204ENST00000357857 1720 ntTSL 2 BASIC18.87■□□□□ 0.61
PTCD2Q8WV60 DGKI-202ENST00000424189 4163 ntAPPRIS ALT2 TSL 5 BASIC18.87■□□□□ 0.61
PTCD2Q8WV60 SETMAR-206ENST00000430981 1671 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
PTCD2Q8WV60 DBX1-201ENST00000524983 1380 ntAPPRIS P1 TSL 5 BASIC18.87■□□□□ 0.61
PTCD2Q8WV60 AP002433.1-201ENST00000525548 964 ntTSL 3 BASIC18.87■□□□□ 0.61
PTCD2Q8WV60 CDH24-205ENST00000554034 2759 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
PTCD2Q8WV60 MAP3K14-AS1-202ENST00000585351 893 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
PTCD2Q8WV60 AC008763.3-201ENST00000597959 777 ntAPPRIS P1 TSL 4 BASIC18.87■□□□□ 0.61
PTCD2Q8WV60 TWIST2-202ENST00000612363 1404 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
PTCD2Q8WV60 AC073508.3-201ENST00000619697 1419 ntBASIC18.87■□□□□ 0.61
PTCD2Q8WV60 LIN28B-AS1-203ENST00000636682 1797 ntTSL 3 BASIC18.87■□□□□ 0.61
PTCD2Q8WV60 IQCJ-SCHIP1-207ENST00000638749 2633 ntAPPRIS P3 TSL 1 (best) BASIC18.87■□□□□ 0.61
PTCD2Q8WV60 FMR1-207ENST00000439526 3699 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
PTCD2Q8WV60 GRB10-205ENST00000401949 2627 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
PTCD2Q8WV60 ATRIP-201ENST00000320211 2590 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
PTCD2Q8WV60 PDLIM4-201ENST00000253754 2282 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
PTCD2Q8WV60 HYOU1-212ENST00000532519 2162 ntTSL 5 BASIC18.86■□□□□ 0.61
PTCD2Q8WV60 PAQR6-201ENST00000292291 1908 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
PTCD2Q8WV60 AC096719.1-201ENST00000510705 1874 ntTSL 5 BASIC18.86■□□□□ 0.61
PTCD2Q8WV60 IFNLR1-202ENST00000327575 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
PTCD2Q8WV60 ARFIP2-204ENST00000445086 1300 ntTSL 2 BASIC18.86■□□□□ 0.61
PTCD2Q8WV60 MCF2L-207ENST00000397024 490 ntTSL 5 BASIC18.86■□□□□ 0.61
PTCD2Q8WV60 TMPOP1-202ENST00000424642 1267 ntBASIC18.86■□□□□ 0.61
PTCD2Q8WV60 FAM86C2P-201ENST00000525180 435 ntTSL 4 BASIC18.86■□□□□ 0.61
PTCD2Q8WV60 SCPEP1-216ENST00000631024 444 ntTSL 5 BASIC18.86■□□□□ 0.61
PTCD2Q8WV60 CITED2-201ENST00000367651 2354 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
PTCD2Q8WV60 TFEB-203ENST00000358871 2188 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
PTCD2Q8WV60 PEX5L-206ENST00000465751 2147 ntAPPRIS ALT2 TSL 2 BASIC18.86■□□□□ 0.61
PTCD2Q8WV60 ETS1-207ENST00000531611 2134 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
PTCD2Q8WV60 NCK1-207ENST00000481752 1971 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
PTCD2Q8WV60 TLX1-201ENST00000370196 2906 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
PTCD2Q8WV60 NRXN1-208ENST00000405472 5724 ntAPPRIS ALT2 TSL 5 BASIC18.86■□□□□ 0.61
PTCD2Q8WV60 CCNJ-202ENST00000403870 2830 ntTSL 5 BASIC18.86■□□□□ 0.61
PTCD2Q8WV60 ISL2-201ENST00000290759 1881 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
PTCD2Q8WV60 EXOSC3-201ENST00000327304 1806 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
PTCD2Q8WV60 MRPL3-201ENST00000264995 1706 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
PTCD2Q8WV60 AL109659.2-201ENST00000606809 1674 ntBASIC18.85■□□□□ 0.61
PTCD2Q8WV60 HERPUD2-201ENST00000311350 2474 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
PTCD2Q8WV60 TNFRSF19-202ENST00000382258 1625 ntAPPRIS P4 TSL 1 (best) BASIC18.85■□□□□ 0.61
PTCD2Q8WV60 FAM118A-202ENST00000405673 1612 ntTSL 5 BASIC18.85■□□□□ 0.61
PTCD2Q8WV60 NUDT16-201ENST00000502852 1552 ntTSL 2 BASIC18.85■□□□□ 0.61
PTCD2Q8WV60 MFSD10-205ENST00000507555 1573 ntTSL 5 BASIC18.85■□□□□ 0.61
PTCD2Q8WV60 FAM90A1-201ENST00000307435 2342 ntAPPRIS P1 TSL 2 BASIC18.85■□□□□ 0.61
PTCD2Q8WV60 SAAL1-201ENST00000300013 1518 ntAPPRIS ALT1 TSL 2 BASIC18.85■□□□□ 0.61
PTCD2Q8WV60 RCC2P3-201ENST00000418112 1537 ntBASIC18.85■□□□□ 0.61
PTCD2Q8WV60 HAUS4-217ENST00000555367 1454 ntTSL 5 BASIC18.85■□□□□ 0.61
PTCD2Q8WV60 SMARCC2-203ENST00000394023 4271 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
PTCD2Q8WV60 AC112777.1-201ENST00000540175 1423 ntBASIC18.85■□□□□ 0.61
PTCD2Q8WV60 SLC5A10-203ENST00000395645 2069 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
PTCD2Q8WV60 PRMT1-201ENST00000391851 1393 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
PTCD2Q8WV60 GSTM4-201ENST00000326729 1321 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 22.8 ms