Protein–RNA interactions for Protein: Q8WV41

SNX33, Sorting nexin-33, humanhuman

Predictions only

Length 574 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX33Q8WV41 VPS37B-201ENST00000267202 3028 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
SNX33Q8WV41 ANKS3-230ENST00000614075 2387 ntAPPRIS P1 TSL 5 BASIC16.85■□□□□ 0.29
SNX33Q8WV41 CNOT9-209ENST00000627282 1621 ntTSL 2 BASIC16.85■□□□□ 0.29
SNX33Q8WV41 MZF1-206ENST00000599369 2587 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
SNX33Q8WV41 FGF17-201ENST00000359441 1714 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
SNX33Q8WV41 RGS3-231ENST00000613049 1726 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
SNX33Q8WV41 PCSK5-202ENST00000376767 2845 ntTSL 2 BASIC16.84■□□□□ 0.29
SNX33Q8WV41 SLC35B2-205ENST00000538577 1909 ntTSL 2 BASIC16.84■□□□□ 0.29
SNX33Q8WV41 SAE1-201ENST00000270225 2049 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
SNX33Q8WV41 WIPF1-202ENST00000359761 2003 ntAPPRIS P2 TSL 1 (best) BASIC16.84■□□□□ 0.29
SNX33Q8WV41 TCF25-225ENST00000614813 2047 ntTSL 5 BASIC16.84■□□□□ 0.29
SNX33Q8WV41 SYTL1-208ENST00000543823 2229 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
SNX33Q8WV41 PDZRN3-202ENST00000308537 1136 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
SNX33Q8WV41 VMO1-201ENST00000328739 766 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
SNX33Q8WV41 UPK3B-203ENST00000394849 1041 ntAPPRIS ALT2 TSL 2 BASIC16.84■□□□□ 0.29
SNX33Q8WV41 METTL21A-204ENST00000425132 869 ntTSL 2 BASIC16.84■□□□□ 0.29
SNX33Q8WV41 RNF135-204ENST00000443677 1261 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
SNX33Q8WV41 AC093827.2-201ENST00000512654 315 ntBASIC16.84■□□□□ 0.29
SNX33Q8WV41 TNFRSF1B-204ENST00000536782 557 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
SNX33Q8WV41 USP36-216ENST00000589424 970 ntTSL 5 BASIC16.84■□□□□ 0.29
SNX33Q8WV41 PTPRU-202ENST00000373779 5579 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
SNX33Q8WV41 AL133373.2-201ENST00000623187 2828 ntBASIC16.84■□□□□ 0.29
SNX33Q8WV41 SPART-209ENST00000494062 3018 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
SNX33Q8WV41 C19orf48-202ENST00000391812 1666 ntAPPRIS P1 TSL 2 BASIC16.84■□□□□ 0.29
SNX33Q8WV41 GABRD-205ENST00000638771 1707 ntAPPRIS ALT2 TSL 3 BASIC16.84■□□□□ 0.29
SNX33Q8WV41 PPP2R2C-209ENST00000515571 1832 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
SNX33Q8WV41 IFRD1-201ENST00000005558 1834 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
SNX33Q8WV41 ZNF419-207ENST00000442920 1857 ntAPPRIS ALT2 TSL 2 BASIC16.84■□□□□ 0.29
SNX33Q8WV41 AC018755.2-202ENST00000429354 1926 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
SNX33Q8WV41 OCSTAMP-201ENST00000279028 2043 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
SNX33Q8WV41 DTX2-211ENST00000446600 2281 ntTSL 2 BASIC16.84■□□□□ 0.29
SNX33Q8WV41 PARS2-201ENST00000371279 2347 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
SNX33Q8WV41 SNTB1-201ENST00000395601 5164 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.29
SNX33Q8WV41 RSPO4-201ENST00000217260 2707 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
SNX33Q8WV41 POU5F1-201ENST00000259915 1420 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
SNX33Q8WV41 SYBU-201ENST00000276646 2870 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
SNX33Q8WV41 MCOLN2-201ENST00000284027 1729 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.28
SNX33Q8WV41 CDCP1-201ENST00000296129 6006 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.28
SNX33Q8WV41 RPS6KB2-201ENST00000312629 1733 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
SNX33Q8WV41 EIF4ENIF1-202ENST00000344710 3115 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
SNX33Q8WV41 CD8A-202ENST00000352580 1977 ntAPPRIS ALT2 TSL 2 BASIC16.83■□□□□ 0.28
SNX33Q8WV41 HP1BP3-202ENST00000375000 928 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
SNX33Q8WV41 STRADB-202ENST00000392249 2190 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
SNX33Q8WV41 PCDHA1-202ENST00000394633 2204 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
SNX33Q8WV41 HERPUD2-202ENST00000396081 3057 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
SNX33Q8WV41 TSPY21P-201ENST00000433481 731 ntBASIC16.83■□□□□ 0.28
SNX33Q8WV41 ETFA-202ENST00000433983 1346 ntTSL 2 BASIC16.83■□□□□ 0.28
SNX33Q8WV41 RBCK1-213ENST00000475269 1200 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
SNX33Q8WV41 KXD1-202ENST00000539106 1496 ntAPPRIS P1 TSL 3 BASIC16.83■□□□□ 0.28
SNX33Q8WV41 ARMC4P1-202ENST00000576034 643 ntTSL 2 BASIC16.83■□□□□ 0.28
SNX33Q8WV41 PRELID3A-209ENST00000592149 2001 ntTSL 2 BASIC16.83■□□□□ 0.28
SNX33Q8WV41 SMAGP-206ENST00000604188 433 ntTSL 3 BASIC16.83■□□□□ 0.28
SNX33Q8WV41 AC254629.1-202ENST00000618276 2112 ntTSL 2 BASIC16.83■□□□□ 0.28
SNX33Q8WV41 Six3os1_6.1-201ENST00000620790 196 ntBASIC16.83■□□□□ 0.28
SNX33Q8WV41 TMEM191C-214ENST00000621561 1337 ntAPPRIS P2 TSL 5 BASIC16.83■□□□□ 0.28
SNX33Q8WV41 IL6R-208ENST00000622330 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
SNX33Q8WV41 TXNRD3-205ENST00000640797 1824 ntAPPRIS ALT2 TSL 2 BASIC16.83■□□□□ 0.28
SNX33Q8WV41 NFKB2-201ENST00000189444 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC16.83■□□□□ 0.28
SNX33Q8WV41 ZBTB4-202ENST00000380599 5866 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
SNX33Q8WV41 RASA4B-201ENST00000306682 2589 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
SNX33Q8WV41 PGLYRP2-202ENST00000340880 2230 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
SNX33Q8WV41 AC135782.1-201ENST00000537498 2154 ntTSL 2 BASIC16.82■□□□□ 0.28
SNX33Q8WV41 TFCP2-204ENST00000548115 1862 ntTSL 5 BASIC16.82■□□□□ 0.28
SNX33Q8WV41 AP5S1-202ENST00000379567 1791 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
SNX33Q8WV41 CYP2F1-201ENST00000331105 1720 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
SNX33Q8WV41 OGG1-201ENST00000302003 1655 ntAPPRIS P4 TSL 1 (best) BASIC16.82■□□□□ 0.28
SNX33Q8WV41 LRCH1-201ENST00000311191 4710 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
SNX33Q8WV41 NOL3-204ENST00000564053 1592 ntAPPRIS ALT2 TSL 2 BASIC16.82■□□□□ 0.28
SNX33Q8WV41 KCNC4-203ENST00000413138 3018 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
SNX33Q8WV41 NXNL2-202ENST00000375855 1457 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
SNX33Q8WV41 CD8B-203ENST00000390655 1417 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
SNX33Q8WV41 TMC6-203ENST00000392467 2833 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
SNX33Q8WV41 HAS3-201ENST00000219322 1163 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
SNX33Q8WV41 LYPD1-201ENST00000345008 1033 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
SNX33Q8WV41 RTL8A-201ENST00000370775 1244 ntAPPRIS P1 BASIC16.82■□□□□ 0.28
SNX33Q8WV41 PSMG1-202ENST00000380900 907 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
SNX33Q8WV41 DUSP15-205ENST00000398084 1256 ntTSL 5 BASIC16.82■□□□□ 0.28
SNX33Q8WV41 KRT16P5-201ENST00000455284 522 ntBASIC16.82■□□□□ 0.28
SNX33Q8WV41 CAVIN3-203ENST00000530979 957 ntTSL 2 BASIC16.82■□□□□ 0.28
SNX33Q8WV41 LRRC75A-AS1-225ENST00000581913 1091 ntTSL 2 BASIC16.82■□□□□ 0.28
SNX33Q8WV41 AC020922.2-201ENST00000596786 359 ntTSL 4 BASIC16.82■□□□□ 0.28
SNX33Q8WV41 AP001412.1-201ENST00000608405 714 ntBASIC16.82■□□□□ 0.28
SNX33Q8WV41 KRTAP5-11-203ENST00000617152 558 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
SNX33Q8WV41 ATRIP-202ENST00000346691 2509 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
SNX33Q8WV41 SKOR1-203ENST00000554054 3620 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
SNX33Q8WV41 BANP-223ENST00000538234 2372 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
SNX33Q8WV41 TTLL12-201ENST00000216129 3385 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
SNX33Q8WV41 RASSF5-205ENST00000581503 5586 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
SNX33Q8WV41 NOC2LP1-202ENST00000452600 2235 ntBASIC16.82■□□□□ 0.28
SNX33Q8WV41 DUSP4-201ENST00000240100 5537 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
SNX33Q8WV41 DLC1-203ENST00000358919 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
SNX33Q8WV41 SLC6A18-201ENST00000324642 2121 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
SNX33Q8WV41 HOXA9-201ENST00000343483 2060 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
SNX33Q8WV41 ARHGAP6-202ENST00000337414 5117 ntAPPRIS P4 TSL 1 (best) BASIC16.82■□□□□ 0.28
SNX33Q8WV41 ACADS-201ENST00000242592 1950 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
SNX33Q8WV41 PDXK-219ENST00000621478 1967 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
SNX33Q8WV41 AD000671.2-201ENST00000589807 1925 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
SNX33Q8WV41 PCDH7-206ENST00000543491 4457 ntAPPRIS ALT2 BASIC16.82■□□□□ 0.28
SNX33Q8WV41 STX5-202ENST00000377897 1785 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
SNX33Q8WV41 PFN2-203ENST00000452853 1780 ntAPPRIS ALT1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 26.6 ms