Protein–RNA interactions for Protein: Q8TD31

CCHCR1, Coiled-coil alpha-helical rod protein 1, humanhuman

Predictions only

Length 782 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1Q8TD31 AC012618.2-201ENST00000428058 849 ntBASIC19.45■□□□□ 0.7
CCHCR1Q8TD31 MIR1302-2HG-202ENST00000473358 712 ntTSL 5 BASIC19.45■□□□□ 0.7
CCHCR1Q8TD31 SNX5-213ENST00000486039 602 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
CCHCR1Q8TD31 AC107956.1-201ENST00000494359 873 ntBASIC19.45■□□□□ 0.7
CCHCR1Q8TD31 MOK-228ENST00000523231 1114 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
CCHCR1Q8TD31 AC140725.1-202ENST00000561145 712 ntTSL 5 BASIC19.45■□□□□ 0.7
CCHCR1Q8TD31 AC004706.3-201ENST00000634558 1009 ntTSL 5 BASIC19.45■□□□□ 0.7
CCHCR1Q8TD31 PODNL1-203ENST00000538371 1826 ntAPPRIS ALT2 TSL 2 BASIC19.45■□□□□ 0.7
CCHCR1Q8TD31 ANKS3-230ENST00000614075 2387 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
CCHCR1Q8TD31 THAP12-201ENST00000260045 3300 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CCHCR1Q8TD31 TNFSF9-201ENST00000245817 1665 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CCHCR1Q8TD31 ZCCHC17-205ENST00000615916 1652 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
CCHCR1Q8TD31 PCDHA13-201ENST00000289272 5260 ntAPPRIS P2 TSL 1 (best) BASIC19.45■□□□□ 0.7
CCHCR1Q8TD31 HOXA9-201ENST00000343483 2060 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CCHCR1Q8TD31 RABEPK-202ENST00000373538 1504 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CCHCR1Q8TD31 CPZ-201ENST00000315782 2136 ntAPPRIS P3 TSL 1 (best) BASIC19.45■□□□□ 0.7
CCHCR1Q8TD31 RUBCNL-203ENST00000378787 2731 ntTSL 2 BASIC19.45■□□□□ 0.7
CCHCR1Q8TD31 BEGAIN-202ENST00000443071 2744 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
CCHCR1Q8TD31 STRADB-202ENST00000392249 2190 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
CCHCR1Q8TD31 ARAP1-AS2-201ENST00000500163 1824 ntTSL 2 BASIC19.44■□□□□ 0.7
CCHCR1Q8TD31 FDXR-214ENST00000581530 1827 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
CCHCR1Q8TD31 ZDHHC2-201ENST00000262096 6377 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CCHCR1Q8TD31 XKR8-201ENST00000373884 2692 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CCHCR1Q8TD31 ANKRD29-201ENST00000322980 1658 ntTSL 2 BASIC19.44■□□□□ 0.7
CCHCR1Q8TD31 ZBTB16-201ENST00000335953 2523 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CCHCR1Q8TD31 PCOLCE-AS1-201ENST00000442166 2537 ntTSL 2 BASIC19.44■□□□□ 0.7
CCHCR1Q8TD31 CXCL3-201ENST00000296026 1075 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CCHCR1Q8TD31 SMIM19-201ENST00000414154 793 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CCHCR1Q8TD31 NIFKP9-201ENST00000419265 221 ntBASIC19.44■□□□□ 0.7
CCHCR1Q8TD31 LINC00636-201ENST00000494231 1264 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
CCHCR1Q8TD31 ADAMTS19-AS1-201ENST00000502827 786 ntTSL 4 BASIC19.44■□□□□ 0.7
CCHCR1Q8TD31 PLEKHA2-206ENST00000521746 2127 ntTSL 5 BASIC19.44■□□□□ 0.7
CCHCR1Q8TD31 TESC-AS1-201ENST00000547006 1053 ntTSL 2 BASIC19.44■□□□□ 0.7
CCHCR1Q8TD31 DET1-205ENST00000558413 583 ntTSL 4 BASIC19.44■□□□□ 0.7
CCHCR1Q8TD31 RPS15-203ENST00000586096 570 ntTSL 2 BASIC19.44■□□□□ 0.7
CCHCR1Q8TD31 AC073195.1-201ENST00000607241 877 ntBASIC19.44■□□□□ 0.7
CCHCR1Q8TD31 HOXC10-201ENST00000303460 1936 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CCHCR1Q8TD31 NOC2LP2-201ENST00000407594 1944 ntBASIC19.44■□□□□ 0.7
CCHCR1Q8TD31 AL133373.2-201ENST00000623187 2828 ntBASIC19.44■□□□□ 0.7
CCHCR1Q8TD31 OPRD1-201ENST00000234961 9345 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CCHCR1Q8TD31 ANKRD13D-201ENST00000308440 2219 ntTSL 2 BASIC19.44■□□□□ 0.7
CCHCR1Q8TD31 PJA1-202ENST00000374571 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
CCHCR1Q8TD31 FUCA1-201ENST00000374479 2047 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CCHCR1Q8TD31 BIRC8-201ENST00000426466 2026 ntAPPRIS P1 BASIC19.44■□□□□ 0.7
CCHCR1Q8TD31 HEXB-207ENST00000511181 2021 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
CCHCR1Q8TD31 WWOX-214ENST00000566780 2482 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CCHCR1Q8TD31 SPC24-206ENST00000592540 2315 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CCHCR1Q8TD31 SNTB2-201ENST00000336278 9789 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CCHCR1Q8TD31 CTSA-201ENST00000191018 1898 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
CCHCR1Q8TD31 COL18A1-202ENST00000355480 5924 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
CCHCR1Q8TD31 HEIH-201ENST00000623091 1652 ntBASIC19.43■□□□□ 0.7
CCHCR1Q8TD31 FIGNL2-201ENST00000564840 4693 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
CCHCR1Q8TD31 P2RY6-201ENST00000349767 1700 ntAPPRIS P1 TSL 2 BASIC19.43■□□□□ 0.7
CCHCR1Q8TD31 NDUFB10-201ENST00000268668 705 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CCHCR1Q8TD31 PTMS-201ENST00000309083 1139 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CCHCR1Q8TD31 RALGPS1-206ENST00000394011 819 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
CCHCR1Q8TD31 PHYHD1-207ENST00000421063 1182 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
CCHCR1Q8TD31 AP000697.1-201ENST00000430607 339 ntTSL 5 BASIC19.43■□□□□ 0.7
CCHCR1Q8TD31 KSR1P1-201ENST00000446298 240 ntBASIC19.43■□□□□ 0.7
CCHCR1Q8TD31 AC137630.1-201ENST00000452042 782 ntTSL 4 BASIC19.43■□□□□ 0.7
CCHCR1Q8TD31 KCNMA1-220ENST00000481070 896 ntTSL 2 BASIC19.43■□□□□ 0.7
CCHCR1Q8TD31 FDX2-207ENST00000494368 584 ntTSL 4 BASIC19.43■□□□□ 0.7
CCHCR1Q8TD31 AC044860.1-201ENST00000560756 1160 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
CCHCR1Q8TD31 AC233702.5-201ENST00000584107 538 ntBASIC19.43■□□□□ 0.7
CCHCR1Q8TD31 TPGS2-221ENST00000614939 1268 ntTSL 4 BASIC19.43■□□□□ 0.7
CCHCR1Q8TD31 MFHAS1-201ENST00000276282 6414 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CCHCR1Q8TD31 FAM131A-202ENST00000340957 2421 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
CCHCR1Q8TD31 SLC39A7-201ENST00000374675 2153 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CCHCR1Q8TD31 DDX42-216ENST00000583590 4148 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
CCHCR1Q8TD31 TYMS-203ENST00000323274 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CCHCR1Q8TD31 PRDM14-201ENST00000276594 2344 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CCHCR1Q8TD31 FAM228A-201ENST00000295150 1774 ntAPPRIS P2 TSL 1 (best) BASIC19.42■□□□□ 0.7
CCHCR1Q8TD31 AP003071.5-201ENST00000641568 2695 ntAPPRIS P1 BASIC19.42■□□□□ 0.7
CCHCR1Q8TD31 POFUT2-201ENST00000331343 4825 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
CCHCR1Q8TD31 NOP14-204ENST00000502735 2723 ntAPPRIS ALT2 TSL 5 BASIC19.42■□□□□ 0.7
CCHCR1Q8TD31 DNM1-211ENST00000627061 2724 ntTSL 5 BASIC19.42■□□□□ 0.7
CCHCR1Q8TD31 GPR135-201ENST00000395116 4578 ntAPPRIS P1 BASIC19.42■□□□□ 0.7
CCHCR1Q8TD31 ZBTB10-205ENST00000610895 2833 ntAPPRIS ALT2 TSL 2 BASIC19.42■□□□□ 0.7
CCHCR1Q8TD31 CYP46A1-202ENST00000380228 1597 ntTSL 2 BASIC19.42■□□□□ 0.7
CCHCR1Q8TD31 IGSF9B-206ENST00000533871 5050 ntAPPRIS P2 TSL 5 BASIC19.42■□□□□ 0.7
CCHCR1Q8TD31 UPK3B-203ENST00000394849 1041 ntAPPRIS ALT2 TSL 2 BASIC19.42■□□□□ 0.7
CCHCR1Q8TD31 CCT7-202ENST00000398422 1234 ntTSL 2 BASIC19.42■□□□□ 0.7
CCHCR1Q8TD31 BABAM1-202ENST00000447614 930 ntAPPRIS ALT2 TSL 5 BASIC19.42■□□□□ 0.7
CCHCR1Q8TD31 RPS2P4-201ENST00000476944 856 ntBASIC19.42■□□□□ 0.7
CCHCR1Q8TD31 GLRB-205ENST00000512619 728 ntTSL 3 BASIC19.42■□□□□ 0.7
CCHCR1Q8TD31 AC066615.1-201ENST00000640911 628 ntBASIC19.42■□□□□ 0.7
CCHCR1Q8TD31 COBLL1-201ENST00000342193 4898 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
CCHCR1Q8TD31 DDX42-202ENST00000389924 3939 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
CCHCR1Q8TD31 FAM222A-202ENST00000538780 3294 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CCHCR1Q8TD31 RAB4A-201ENST00000366690 2966 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CCHCR1Q8TD31 ACADS-202ENST00000411593 1398 ntTSL 2 BASIC19.42■□□□□ 0.7
CCHCR1Q8TD31 LINC00511-201ENST00000453722 1716 ntTSL 2 BASIC19.42■□□□□ 0.7
CCHCR1Q8TD31 SNAI3-AS1-205ENST00000568633 2096 ntBASIC19.42■□□□□ 0.7
CCHCR1Q8TD31 ECE1-203ENST00000374893 2484 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
CCHCR1Q8TD31 KATNBL1P6-202ENST00000562413 1466 ntBASIC19.41■□□□□ 0.7
CCHCR1Q8TD31 MATN4-203ENST00000372754 2200 ntAPPRIS ALT2 TSL 5 BASIC19.41■□□□□ 0.7
CCHCR1Q8TD31 ANXA8L1-203ENST00000613703 1874 ntTSL 2 BASIC19.41■□□□□ 0.7
CCHCR1Q8TD31 GNAS-AS1-202ENST00000443966 2341 ntTSL 5 BASIC19.41■□□□□ 0.7
CCHCR1Q8TD31 GGNBP2-210ENST00000611219 2315 ntTSL 2 BASIC19.41■□□□□ 0.7
CCHCR1Q8TD31 HLA-G-205ENST00000428701 1578 ntAPPRIS P2 BASIC19.41■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 29.2 ms