Protein–RNA interactions for Protein: Q8NDN9

RCBTB1, RCC1 and BTB domain-containing protein 1, humanhuman

Predictions only

Length 531 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RCBTB1Q8NDN9 HCK-206ENST00000518730 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
RCBTB1Q8NDN9 STARD3-219ENST00000580611 1989 ntTSL 5 BASIC17.9■□□□□ 0.46
RCBTB1Q8NDN9 FAM129C-201ENST00000332386 2222 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
RCBTB1Q8NDN9 EIF2B1-201ENST00000424014 2477 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
RCBTB1Q8NDN9 SLC39A1-209ENST00000537590 2022 ntTSL 2 BASIC17.9■□□□□ 0.46
RCBTB1Q8NDN9 CCK-202ENST00000396169 1527 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
RCBTB1Q8NDN9 MRAS-204ENST00000464896 1534 ntTSL 2 BASIC17.9■□□□□ 0.46
RCBTB1Q8NDN9 ZHX3-212ENST00000558993 1528 ntTSL 5 BASIC17.9■□□□□ 0.46
RCBTB1Q8NDN9 BOLA2B-201ENST00000305321 1012 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
RCBTB1Q8NDN9 BOLA2-201ENST00000330978 1012 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
RCBTB1Q8NDN9 HIST1H2AI-201ENST00000358739 503 ntAPPRIS P1 BASIC17.9■□□□□ 0.46
RCBTB1Q8NDN9 EFCAB2-203ENST00000366523 1233 ntAPPRIS P1 TSL 3 BASIC17.9■□□□□ 0.46
RCBTB1Q8NDN9 PDLIM4-202ENST00000379018 1006 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
RCBTB1Q8NDN9 CXCL12-204ENST00000395793 665 ntTSL 5 BASIC17.9■□□□□ 0.46
RCBTB1Q8NDN9 ING5-202ENST00000406941 946 ntAPPRIS ALT1 TSL 1 (best) BASIC17.9■□□□□ 0.46
RCBTB1Q8NDN9 CYHR1-203ENST00000424149 1162 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
RCBTB1Q8NDN9 AC010655.4-201ENST00000462662 707 ntTSL 4 BASIC17.9■□□□□ 0.46
RCBTB1Q8NDN9 CUTA-210ENST00000488034 769 ntAPPRIS ALT1 TSL 2 BASIC17.9■□□□□ 0.46
RCBTB1Q8NDN9 ACY1-210ENST00000494103 1298 ntTSL 3 BASIC17.9■□□□□ 0.46
RCBTB1Q8NDN9 PRTN3-202ENST00000544537 1036 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
RCBTB1Q8NDN9 TMEM220-AS1-201ENST00000579114 575 ntTSL 4 BASIC17.9■□□□□ 0.46
RCBTB1Q8NDN9 AL136038.4-201ENST00000603606 1261 ntBASIC17.9■□□□□ 0.46
RCBTB1Q8NDN9 AL121672.3-201ENST00000608644 468 ntBASIC17.9■□□□□ 0.46
RCBTB1Q8NDN9 REXO2-220ENST00000611665 1158 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
RCBTB1Q8NDN9 PITX2-201ENST00000306732 2320 ntAPPRIS P4 TSL 1 (best) BASIC17.9■□□□□ 0.46
RCBTB1Q8NDN9 ECE1-205ENST00000436918 2328 ntTSL 2 BASIC17.9■□□□□ 0.46
RCBTB1Q8NDN9 CLINT1-207ENST00000523908 2346 ntAPPRIS ALT1 TSL 1 (best) BASIC17.9■□□□□ 0.46
RCBTB1Q8NDN9 LDHD-201ENST00000300051 2067 ntAPPRIS P3 TSL 1 (best) BASIC17.9■□□□□ 0.46
RCBTB1Q8NDN9 SLC3A2-206ENST00000535296 2084 ntTSL 5 BASIC17.9■□□□□ 0.46
RCBTB1Q8NDN9 KCNS2-201ENST00000287042 5219 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
RCBTB1Q8NDN9 CEP78-202ENST00000376597 2618 ntAPPRIS P4 TSL 1 (best) BASIC17.9■□□□□ 0.46
RCBTB1Q8NDN9 AMACR-205ENST00000426255 1316 ntTSL 2 BASIC17.9■□□□□ 0.46
RCBTB1Q8NDN9 SRRM2-AS1-203ENST00000571305 1344 ntTSL 2 BASIC17.9■□□□□ 0.46
RCBTB1Q8NDN9 ALDOA-212ENST00000564546 2104 ntAPPRIS P2 TSL 1 (best) BASIC17.9■□□□□ 0.46
RCBTB1Q8NDN9 GAS2L1-208ENST00000616432 2925 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
RCBTB1Q8NDN9 KIF26A-202ENST00000423312 5649 ntAPPRIS P2 TSL 5 BASIC17.9■□□□□ 0.46
RCBTB1Q8NDN9 PCSK6-214ENST00000611716 4409 ntAPPRIS P4 TSL 1 (best) BASIC17.9■□□□□ 0.46
RCBTB1Q8NDN9 SOCS2-201ENST00000340600 2761 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
RCBTB1Q8NDN9 CDK4-202ENST00000312990 1650 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
RCBTB1Q8NDN9 MATN4-201ENST00000353917 1657 ntTSL 5 BASIC17.9■□□□□ 0.46
RCBTB1Q8NDN9 PNMA8B-202ENST00000599531 5308 ntAPPRIS P1 BASIC17.9■□□□□ 0.46
RCBTB1Q8NDN9 LONRF3-202ENST00000371628 2550 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.46
RCBTB1Q8NDN9 HEXDC-201ENST00000327949 1733 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.46
RCBTB1Q8NDN9 ETV7-202ENST00000340181 1719 ntAPPRIS P3 TSL 1 (best) BASIC17.89■□□□□ 0.46
RCBTB1Q8NDN9 WDR90-201ENST00000293879 5488 ntAPPRIS P2 TSL 5 BASIC17.89■□□□□ 0.46
RCBTB1Q8NDN9 CHID1-203ENST00000436108 1477 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
RCBTB1Q8NDN9 SLC35G2-202ENST00000446465 2060 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
RCBTB1Q8NDN9 AL391807.1-203ENST00000604392 2365 ntBASIC17.89■□□□□ 0.45
RCBTB1Q8NDN9 MARC2-202ENST00000366913 2134 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
RCBTB1Q8NDN9 IRX1P1-201ENST00000438849 1838 ntBASIC17.89■□□□□ 0.45
RCBTB1Q8NDN9 CALHM2-201ENST00000260743 1859 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
RCBTB1Q8NDN9 ZNF575-201ENST00000314228 1298 ntAPPRIS P1 TSL 2 BASIC17.89■□□□□ 0.45
RCBTB1Q8NDN9 ENSA-205ENST00000361532 792 ntTSL 2 BASIC17.89■□□□□ 0.45
RCBTB1Q8NDN9 PMEPA1-204ENST00000395814 800 ntTSL 3 BASIC17.89■□□□□ 0.45
RCBTB1Q8NDN9 AC026396.1-201ENST00000419388 421 ntBASIC17.89■□□□□ 0.45
RCBTB1Q8NDN9 DMKN-212ENST00000443640 842 ntAPPRIS ALT2 TSL 5 BASIC17.89■□□□□ 0.45
RCBTB1Q8NDN9 PGAP2-206ENST00000459679 795 ntTSL 2 BASIC17.89■□□□□ 0.45
RCBTB1Q8NDN9 MTG1-205ENST00000477902 1283 ntTSL 3 BASIC17.89■□□□□ 0.45
RCBTB1Q8NDN9 IRF5-214ENST00000613821 595 ntTSL 5 BASIC17.89■□□□□ 0.45
RCBTB1Q8NDN9 SPEG-225ENST00000617028 815 ntTSL 5 BASIC17.89■□□□□ 0.45
RCBTB1Q8NDN9 MARK4-211ENST00000622871 1147 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
RCBTB1Q8NDN9 CTNNBL1-201ENST00000361383 1925 ntAPPRIS P2 TSL 1 (best) BASIC17.89■□□□□ 0.45
RCBTB1Q8NDN9 SCD5-201ENST00000273908 1995 ntTSL 2 BASIC17.89■□□□□ 0.45
RCBTB1Q8NDN9 RETREG2-203ENST00000430297 4618 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
RCBTB1Q8NDN9 FAM182B-201ENST00000376403 1681 ntAPPRIS P5 TSL 1 (best) BASIC17.89■□□□□ 0.45
RCBTB1Q8NDN9 TM7SF3-201ENST00000343028 2709 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
RCBTB1Q8NDN9 YDJC-201ENST00000292778 1351 ntAPPRIS P1 TSL 2 BASIC17.89■□□□□ 0.45
RCBTB1Q8NDN9 DTNBP1-203ENST00000355917 1359 ntTSL 5 BASIC17.89■□□□□ 0.45
RCBTB1Q8NDN9 LAT-204ENST00000395461 1448 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
RCBTB1Q8NDN9 TSPAN4-204ENST00000397404 1462 ntAPPRIS P1 TSL 5 BASIC17.88■□□□□ 0.45
RCBTB1Q8NDN9 SBNO2-201ENST00000361757 4923 ntAPPRIS P4 TSL 1 (best) BASIC17.88■□□□□ 0.45
RCBTB1Q8NDN9 HLA-F-217ENST00000334668 1283 ntAPPRIS ALT2 BASIC17.88■□□□□ 0.45
RCBTB1Q8NDN9 SLX1A-202ENST00000345535 762 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
RCBTB1Q8NDN9 SLX1B-202ENST00000351581 762 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
RCBTB1Q8NDN9 HLA-F-220ENST00000434407 884 ntBASIC17.88■□□□□ 0.45
RCBTB1Q8NDN9 DYDC2-206ENST00000444807 1173 ntAPPRIS P3 TSL 3 BASIC17.88■□□□□ 0.45
RCBTB1Q8NDN9 MHENCR-202ENST00000449500 801 ntTSL 2 BASIC17.88■□□□□ 0.45
RCBTB1Q8NDN9 PRAP1-202ENST00000463201 587 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
RCBTB1Q8NDN9 PRELID1P1-202ENST00000567272 903 ntBASIC17.88■□□□□ 0.45
RCBTB1Q8NDN9 MIR3652-201ENST00000579335 131 ntBASIC17.88■□□□□ 0.45
RCBTB1Q8NDN9 PRR29-207ENST00000580752 458 ntTSL 3 BASIC17.88■□□□□ 0.45
RCBTB1Q8NDN9 CADM1-222ENST00000616271 1246 ntTSL 5 BASIC17.88■□□□□ 0.45
RCBTB1Q8NDN9 KCNE1B-204ENST00000623803 811 ntAPPRIS P2 TSL 1 (best) BASIC17.88■□□□□ 0.45
RCBTB1Q8NDN9 ANKRD36-207ENST00000639293 1168 ntAPPRIS ALT2 TSL 5 BASIC17.88■□□□□ 0.45
RCBTB1Q8NDN9 VPS72-207ENST00000640458 689 ntTSL 5 BASIC17.88■□□□□ 0.45
RCBTB1Q8NDN9 DCBLD2-201ENST00000326840 6122 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
RCBTB1Q8NDN9 NRXN1-208ENST00000405472 5724 ntAPPRIS ALT2 TSL 5 BASIC17.88■□□□□ 0.45
RCBTB1Q8NDN9 PFN2-203ENST00000452853 1780 ntAPPRIS ALT1 TSL 1 (best) BASIC17.88■□□□□ 0.45
RCBTB1Q8NDN9 SMIM4-203ENST00000477703 1770 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
RCBTB1Q8NDN9 MAP4K4-204ENST00000350198 7316 ntTSL 5 BASIC17.88■□□□□ 0.45
RCBTB1Q8NDN9 PTPRN2-204ENST00000404321 1374 ntTSL 5 BASIC17.88■□□□□ 0.45
RCBTB1Q8NDN9 BACE2-201ENST00000328735 2824 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
RCBTB1Q8NDN9 ASCL5-202ENST00000458416 1420 ntAPPRIS P1 BASIC17.88■□□□□ 0.45
RCBTB1Q8NDN9 CFAP100-203ENST00000505024 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
RCBTB1Q8NDN9 MATN4-202ENST00000360607 2127 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
RCBTB1Q8NDN9 PFKFB3-204ENST00000379785 2181 ntTSL 5 BASIC17.87■□□□□ 0.45
RCBTB1Q8NDN9 MYC-205ENST00000524013 2150 ntAPPRIS ALT1 TSL 1 (best) BASIC17.87■□□□□ 0.45
RCBTB1Q8NDN9 GPR35-201ENST00000319838 2249 ntAPPRIS P3 TSL 2 BASIC17.87■□□□□ 0.45
RCBTB1Q8NDN9 FEM1AP3-201ENST00000403722 1741 ntBASIC17.87■□□□□ 0.45
RCBTB1Q8NDN9 TOX2-205ENST00000423191 1709 ntTSL 2 BASIC17.87■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 27.1 ms