Protein–RNA interactions for Protein: Q8IYR6

TMEFF1, Tomoregulin-1, humanhuman

Predictions only

Length 380 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEFF1Q8IYR6 TMEM42-201ENST00000302392 1026 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
TMEFF1Q8IYR6 PHOSPHO2-201ENST00000359744 1125 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
TMEFF1Q8IYR6 CD1E-203ENST00000368156 861 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
TMEFF1Q8IYR6 EEF1E1-202ENST00000429723 562 ntTSL 3 BASIC18.52■□□□□ 0.56
TMEFF1Q8IYR6 ELP6-205ENST00000439305 880 ntTSL 2 BASIC18.52■□□□□ 0.56
TMEFF1Q8IYR6 AP001625.2-201ENST00000442605 575 ntTSL 2 BASIC18.52■□□□□ 0.56
TMEFF1Q8IYR6 AC007834.1-201ENST00000446473 728 ntTSL 3 BASIC18.52■□□□□ 0.56
TMEFF1Q8IYR6 AC092338.2-202ENST00000567158 611 ntTSL 5 BASIC18.52■□□□□ 0.56
TMEFF1Q8IYR6 CALM3-211ENST00000598871 561 ntTSL 4 BASIC18.52■□□□□ 0.56
TMEFF1Q8IYR6 AL390719.2-201ENST00000606993 987 ntBASIC18.52■□□□□ 0.56
TMEFF1Q8IYR6 AC004263.2-201ENST00000617183 678 ntBASIC18.52■□□□□ 0.56
TMEFF1Q8IYR6 NDUFA6-204ENST00000617763 1183 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
TMEFF1Q8IYR6 IZUMO4-213ENST00000620263 947 ntTSL 3 BASIC18.52■□□□□ 0.56
TMEFF1Q8IYR6 MARK4-211ENST00000622871 1147 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
TMEFF1Q8IYR6 SSX2IP-210ENST00000605755 1933 ntTSL 2 BASIC18.52■□□□□ 0.56
TMEFF1Q8IYR6 PBX1-222ENST00000627490 1769 ntTSL 2 BASIC18.52■□□□□ 0.55
TMEFF1Q8IYR6 AC233702.3-201ENST00000578656 1387 ntBASIC18.52■□□□□ 0.55
TMEFF1Q8IYR6 MRPL4-203ENST00000393733 1620 ntTSL 5 BASIC18.52■□□□□ 0.55
TMEFF1Q8IYR6 SOX4-201ENST00000244745 5852 ntAPPRIS P1 BASIC18.52■□□□□ 0.55
TMEFF1Q8IYR6 ZBTB7A-201ENST00000322357 5422 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
TMEFF1Q8IYR6 PLSCR3-212ENST00000576201 1965 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
TMEFF1Q8IYR6 FSCN2-201ENST00000334850 1551 ntTSL 5 BASIC18.51■□□□□ 0.55
TMEFF1Q8IYR6 LIMS2-207ENST00000409808 2315 ntAPPRIS ALT1 TSL 5 BASIC18.51■□□□□ 0.55
TMEFF1Q8IYR6 DOCK9-206ENST00000427887 4176 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
TMEFF1Q8IYR6 AC107959.1-202ENST00000502083 1945 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
TMEFF1Q8IYR6 MMP28-201ENST00000605424 1928 ntAPPRIS P3 TSL 1 (best) BASIC18.51■□□□□ 0.55
TMEFF1Q8IYR6 DLGAP4-201ENST00000339266 5016 ntAPPRIS ALT2 TSL 5 BASIC18.51■□□□□ 0.55
TMEFF1Q8IYR6 KRT18-207ENST00000550600 1696 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
TMEFF1Q8IYR6 ARID3C-201ENST00000378909 1411 ntAPPRIS P1 TSL 2 BASIC18.51■□□□□ 0.55
TMEFF1Q8IYR6 FUCA1-201ENST00000374479 2047 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
TMEFF1Q8IYR6 STX6-204ENST00000542060 4809 ntTSL 2 BASIC18.51■□□□□ 0.55
TMEFF1Q8IYR6 CCDC134-201ENST00000255784 1270 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
TMEFF1Q8IYR6 ATP5J-201ENST00000284971 614 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
TMEFF1Q8IYR6 MRPL43-203ENST00000318364 1010 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
TMEFF1Q8IYR6 MRPL43-204ENST00000342071 894 ntTSL 5 BASIC18.51■□□□□ 0.55
TMEFF1Q8IYR6 TP73-202ENST00000354437 2140 ntTSL 5 BASIC18.51■□□□□ 0.55
TMEFF1Q8IYR6 ART5-201ENST00000359918 1241 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
TMEFF1Q8IYR6 SERF1B-202ENST00000380751 703 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
TMEFF1Q8IYR6 MRPL3P1-201ENST00000400109 1033 ntBASIC18.51■□□□□ 0.55
TMEFF1Q8IYR6 SEC61G-203ENST00000415949 732 ntAPPRIS P1 TSL 5 BASIC18.51■□□□□ 0.55
TMEFF1Q8IYR6 AL137026.1-202ENST00000452578 1089 ntTSL 2 BASIC18.51■□□□□ 0.55
TMEFF1Q8IYR6 KRT16P4-201ENST00000453883 522 ntBASIC18.51■□□□□ 0.55
TMEFF1Q8IYR6 LBX1-AS1-204ENST00000456391 421 ntTSL 5 BASIC18.51■□□□□ 0.55
TMEFF1Q8IYR6 BOC-211ENST00000484034 1286 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
TMEFF1Q8IYR6 PLPP5-214ENST00000531823 875 ntTSL 3 BASIC18.51■□□□□ 0.55
TMEFF1Q8IYR6 ADAM10-217ENST00000561288 583 ntTSL 3 BASIC18.51■□□□□ 0.55
TMEFF1Q8IYR6 C19orf25-204ENST00000586564 1265 ntAPPRIS P1 TSL 3 BASIC18.51■□□□□ 0.55
TMEFF1Q8IYR6 AC036176.1-201ENST00000589905 785 ntTSL 2 BASIC18.51■□□□□ 0.55
TMEFF1Q8IYR6 AL121912.1-201ENST00000603683 238 ntBASIC18.51■□□□□ 0.55
TMEFF1Q8IYR6 C3orf18-203ENST00000426034 2486 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
TMEFF1Q8IYR6 RAX-202ENST00000334889 3197 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
TMEFF1Q8IYR6 RBFADN-201ENST00000562391 1350 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
TMEFF1Q8IYR6 GDF5OS-201ENST00000374375 1734 ntAPPRIS P1 TSL 2 BASIC18.51■□□□□ 0.55
TMEFF1Q8IYR6 CD81-AS1-201ENST00000413483 1460 ntTSL 2 BASIC18.51■□□□□ 0.55
TMEFF1Q8IYR6 SLC22A23-205ENST00000436008 6641 ntAPPRIS ALT2 TSL 5 BASIC18.51■□□□□ 0.55
TMEFF1Q8IYR6 MFSD1-201ENST00000264266 1594 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
TMEFF1Q8IYR6 ATAD3A-202ENST00000378755 2612 ntTSL 2 BASIC18.51■□□□□ 0.55
TMEFF1Q8IYR6 HGFAC-204ENST00000511533 2016 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
TMEFF1Q8IYR6 MATN4-201ENST00000353917 1657 ntTSL 5 BASIC18.5■□□□□ 0.55
TMEFF1Q8IYR6 C21orf58-205ENST00000397683 1674 ntAPPRIS ALT2 TSL 2 BASIC18.5■□□□□ 0.55
TMEFF1Q8IYR6 JMJD7-201ENST00000397299 1416 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
TMEFF1Q8IYR6 ZNF510-203ENST00000375231 5616 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
TMEFF1Q8IYR6 ST3GAL4-209ENST00000526727 1967 ntAPPRIS ALT1 TSL 1 (best) BASIC18.5■□□□□ 0.55
TMEFF1Q8IYR6 ABHD14B-202ENST00000361143 1636 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
TMEFF1Q8IYR6 KCNC2-204ENST00000540018 2168 ntAPPRIS ALT2 TSL 2 BASIC18.5■□□□□ 0.55
TMEFF1Q8IYR6 WNT6-201ENST00000233948 1703 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
TMEFF1Q8IYR6 HDDC3-201ENST00000330334 1047 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
TMEFF1Q8IYR6 NT5E-202ENST00000369646 974 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
TMEFF1Q8IYR6 MRPL43-208ENST00000370242 884 ntTSL 2 BASIC18.5■□□□□ 0.55
TMEFF1Q8IYR6 PTX4-202ENST00000440447 1117 ntTSL 5 BASIC18.5■□□□□ 0.55
TMEFF1Q8IYR6 CMPK1-205ENST00000471289 816 ntTSL 2 BASIC18.5■□□□□ 0.55
TMEFF1Q8IYR6 ORAOV1-210ENST00000539414 817 ntAPPRIS ALT1 TSL 2 BASIC18.5■□□□□ 0.55
TMEFF1Q8IYR6 LIMD2-211ENST00000583211 1298 ntTSL 3 BASIC18.5■□□□□ 0.55
TMEFF1Q8IYR6 Z69720.1-201ENST00000601483 472 ntBASIC18.5■□□□□ 0.55
TMEFF1Q8IYR6 AC008878.2-201ENST00000601870 942 ntAPPRIS P1 TSL 4 BASIC18.5■□□□□ 0.55
TMEFF1Q8IYR6 AL353801.3-201ENST00000609898 542 ntBASIC18.5■□□□□ 0.55
TMEFF1Q8IYR6 CTNNBL1-201ENST00000361383 1925 ntAPPRIS P2 TSL 1 (best) BASIC18.5■□□□□ 0.55
TMEFF1Q8IYR6 PBK-203ENST00000522944 1499 ntTSL 2 BASIC18.5■□□□□ 0.55
TMEFF1Q8IYR6 UBE2F-205ENST00000414443 2100 ntTSL 2 BASIC18.5■□□□□ 0.55
TMEFF1Q8IYR6 TPD52-211ENST00000519303 1594 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
TMEFF1Q8IYR6 CPEB1-214ENST00000617522 2220 ntTSL 5 BASIC18.5■□□□□ 0.55
TMEFF1Q8IYR6 FAM53A-202ENST00000461064 2159 ntAPPRIS P1 TSL 2 BASIC18.49■□□□□ 0.55
TMEFF1Q8IYR6 ASCL4-201ENST00000342331 2260 ntAPPRIS P1 BASIC18.49■□□□□ 0.55
TMEFF1Q8IYR6 CFC1-203ENST00000621673 1444 ntTSL 2 BASIC18.49■□□□□ 0.55
TMEFF1Q8IYR6 SRCIN1-213ENST00000617146 7058 ntAPPRIS P2 TSL 1 (best) BASIC18.49■□□□□ 0.55
TMEFF1Q8IYR6 MCIDAS-201ENST00000513312 1736 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
TMEFF1Q8IYR6 MIXL1-201ENST00000366810 2005 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
TMEFF1Q8IYR6 IQCJ-SCHIP1-204ENST00000485419 2445 ntAPPRIS ALT2 TSL 2 BASIC18.49■□□□□ 0.55
TMEFF1Q8IYR6 C6orf15-201ENST00000259870 1140 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
TMEFF1Q8IYR6 DGUOK-201ENST00000264093 1144 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
TMEFF1Q8IYR6 TMEM89-201ENST00000330862 662 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
TMEFF1Q8IYR6 DGUOK-202ENST00000348222 880 ntTSL 2 BASIC18.49■□□□□ 0.55
TMEFF1Q8IYR6 MIR564-202ENST00000385049 94 ntBASIC18.49■□□□□ 0.55
TMEFF1Q8IYR6 C7orf34-201ENST00000409607 766 ntAPPRIS P2 TSL 1 (best) BASIC18.49■□□□□ 0.55
TMEFF1Q8IYR6 PRSS42-201ENST00000429665 882 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
TMEFF1Q8IYR6 AC106795.1-205ENST00000512851 1056 ntBASIC18.49■□□□□ 0.55
TMEFF1Q8IYR6 ISCU-208ENST00000539593 1071 ntTSL 2 BASIC18.49■□□□□ 0.55
TMEFF1Q8IYR6 AL662844.1-201ENST00000546340 181 ntBASIC18.49■□□□□ 0.55
TMEFF1Q8IYR6 ZNF688-207ENST00000567855 540 ntTSL 2 BASIC18.49■□□□□ 0.55
TMEFF1Q8IYR6 MUC1-224ENST00000611577 1023 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 33.4 ms