Protein–RNA interactions for Protein: Q8IY18

SMC5, Structural maintenance of chromosomes protein 5, humanhuman

Predictions only

Length 1,101 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMC5Q8IY18 SERPINH1-215ENST00000533603 2299 ntAPPRIS P1 TSL 2 BASIC23.1■■□□□ 1.29
SMC5Q8IY18 GSDMD-201ENST00000262580 1762 ntAPPRIS P2 TSL 1 (best) BASIC23.1■■□□□ 1.29
SMC5Q8IY18 C12orf42-205ENST00000548048 1532 ntAPPRIS ALT2 TSL 5 BASIC23.1■■□□□ 1.29
SMC5Q8IY18 MSGN1-201ENST00000281047 606 ntAPPRIS P1 BASIC23.1■■□□□ 1.29
SMC5Q8IY18 STARD3-201ENST00000336308 2132 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
SMC5Q8IY18 SPNS3-201ENST00000355530 2133 ntAPPRIS P1 TSL 2 BASIC23.1■■□□□ 1.29
SMC5Q8IY18 AC073343.2-203ENST00000366167 564 ntTSL 4 BASIC23.1■■□□□ 1.29
SMC5Q8IY18 AL390728.5-201ENST00000428687 706 ntTSL 3 BASIC23.1■■□□□ 1.29
SMC5Q8IY18 ELP6-205ENST00000439305 880 ntTSL 2 BASIC23.1■■□□□ 1.29
SMC5Q8IY18 AL355355.2-201ENST00000442321 338 ntBASIC23.1■■□□□ 1.29
SMC5Q8IY18 AP003071.4-201ENST00000562276 1284 ntBASIC23.1■■□□□ 1.29
SMC5Q8IY18 DECR2-212ENST00000627716 352 ntTSL 2 BASIC23.1■■□□□ 1.29
SMC5Q8IY18 MSI2-203ENST00000416426 1714 ntTSL 2 BASIC23.1■■□□□ 1.29
SMC5Q8IY18 TMEM177-204ENST00000424086 1738 ntAPPRIS P1 TSL 2 BASIC23.1■■□□□ 1.29
SMC5Q8IY18 FAM131A-202ENST00000340957 2421 ntTSL 1 (best) BASIC23.1■■□□□ 1.29
SMC5Q8IY18 CENPA-202ENST00000335756 1452 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
SMC5Q8IY18 NECTIN3-206ENST00000485303 3664 ntAPPRIS P3 TSL 1 (best) BASIC23.1■■□□□ 1.29
SMC5Q8IY18 GSEC-201ENST00000626810 2289 ntTSL 2 BASIC23.1■■□□□ 1.29
SMC5Q8IY18 TADA3-201ENST00000301964 2355 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
SMC5Q8IY18 ZNF385B-204ENST00000410066 3288 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
SMC5Q8IY18 AL590648.2-201ENST00000427949 2225 ntTSL 2 BASIC23.09■■□□□ 1.29
SMC5Q8IY18 CCNC-207ENST00000518714 1426 ntTSL 5 BASIC23.09■■□□□ 1.29
SMC5Q8IY18 CORO6-212ENST00000584969 1416 ntAPPRIS ALT1 TSL 5 BASIC23.09■■□□□ 1.29
SMC5Q8IY18 IFFO1-202ENST00000356896 2680 ntTSL 5 BASIC23.09■■□□□ 1.29
SMC5Q8IY18 EPB41L4B-201ENST00000374557 4006 ntAPPRIS ALT2 TSL 1 (best) BASIC23.09■■□□□ 1.29
SMC5Q8IY18 SNN-201ENST00000329565 3312 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
SMC5Q8IY18 CAMK4-210ENST00000512453 1640 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
SMC5Q8IY18 AP001476.1-201ENST00000451618 2198 ntTSL 2 BASIC23.09■■□□□ 1.29
SMC5Q8IY18 EMC6-201ENST00000248378 653 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
SMC5Q8IY18 FAM26F-202ENST00000368605 1117 ntAPPRIS P1 TSL 5 BASIC23.09■■□□□ 1.29
SMC5Q8IY18 BCL7B-206ENST00000455335 985 ntTSL 3 BASIC23.09■■□□□ 1.29
SMC5Q8IY18 RPL29-202ENST00000466397 742 ntAPPRIS P1 TSL 2 BASIC23.09■■□□□ 1.29
SMC5Q8IY18 TCP11-228ENST00000611141 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC23.09■■□□□ 1.29
SMC5Q8IY18 ASAP2-202ENST00000315273 5582 ntAPPRIS ALT2 TSL 1 (best) BASIC23.09■■□□□ 1.29
SMC5Q8IY18 CYP2D7-201ENST00000358097 1655 ntTSL 1 (best) BASIC23.09■■□□□ 1.29
SMC5Q8IY18 SLC35A2-217ENST00000635589 1424 ntTSL 2 BASIC23.08■■□□□ 1.29
SMC5Q8IY18 CIRBP-202ENST00000413636 1606 ntTSL 2 BASIC23.08■■□□□ 1.29
SMC5Q8IY18 HCG18-235ENST00000426882 4862 ntTSL 1 (best) BASIC23.08■■□□□ 1.29
SMC5Q8IY18 MTMR12-203ENST00000382142 5187 ntAPPRIS P3 TSL 1 (best) BASIC23.08■■□□□ 1.29
SMC5Q8IY18 AC018470.1-201ENST00000624790 3129 ntBASIC23.08■■□□□ 1.29
SMC5Q8IY18 TNNC1-201ENST00000232975 714 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
SMC5Q8IY18 AP000593.1-201ENST00000393668 712 ntBASIC23.08■■□□□ 1.29
SMC5Q8IY18 RBM17P1-201ENST00000453646 1190 ntBASIC23.08■■□□□ 1.29
SMC5Q8IY18 DBNL-214ENST00000456905 1241 ntTSL 2 BASIC23.08■■□□□ 1.29
SMC5Q8IY18 AC008550.1-201ENST00000511500 884 ntBASIC23.08■■□□□ 1.29
SMC5Q8IY18 PRKACA-209ENST00000590853 1101 ntTSL 5 BASIC23.08■■□□□ 1.29
SMC5Q8IY18 AHCYL1-203ENST00000393614 4313 ntTSL 2 BASIC23.08■■□□□ 1.29
SMC5Q8IY18 FBXO44-201ENST00000251546 1896 ntTSL 2 BASIC23.08■■□□□ 1.29
SMC5Q8IY18 AC068880.1-201ENST00000507289 2297 ntBASIC23.08■■□□□ 1.29
SMC5Q8IY18 DLGAP4-201ENST00000339266 5016 ntAPPRIS ALT2 TSL 5 BASIC23.08■■□□□ 1.28
SMC5Q8IY18 IDUA-210ENST00000514224 2130 ntTSL 2 BASIC23.08■■□□□ 1.28
SMC5Q8IY18 AC034236.2-201ENST00000606662 1610 ntBASIC23.08■■□□□ 1.28
SMC5Q8IY18 FPGS-201ENST00000373225 2278 ntTSL 2 BASIC23.07■■□□□ 1.28
SMC5Q8IY18 AC027097.1-202ENST00000592201 1954 ntTSL 1 (best) BASIC23.07■■□□□ 1.28
SMC5Q8IY18 NOP14-204ENST00000502735 2723 ntAPPRIS ALT2 TSL 5 BASIC23.07■■□□□ 1.28
SMC5Q8IY18 TMPRSS12-201ENST00000398458 1450 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
SMC5Q8IY18 XKR6-203ENST00000416569 3382 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
SMC5Q8IY18 MCCC1-215ENST00000629669 2316 ntTSL 5 BASIC23.07■■□□□ 1.28
SMC5Q8IY18 SH3GLB2-202ENST00000372559 1365 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
SMC5Q8IY18 ACADS-202ENST00000411593 1398 ntTSL 2 BASIC23.07■■□□□ 1.28
SMC5Q8IY18 SERPINH1-212ENST00000530284 1358 ntTSL 1 (best) BASIC23.07■■□□□ 1.28
SMC5Q8IY18 AC004080.6-201ENST00000467897 919 ntTSL 5 BASIC23.07■■□□□ 1.28
SMC5Q8IY18 AC097641.1-201ENST00000580671 588 ntTSL 4 BASIC23.07■■□□□ 1.28
SMC5Q8IY18 MIR3180-5-201ENST00000583743 153 ntBASIC23.07■■□□□ 1.28
SMC5Q8IY18 IMPA2-208ENST00000589238 923 ntTSL 3 BASIC23.07■■□□□ 1.28
SMC5Q8IY18 AC016737.2-201ENST00000609273 358 ntTSL 3 BASIC23.07■■□□□ 1.28
SMC5Q8IY18 PRRT1-201ENST00000211413 1909 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
SMC5Q8IY18 SEPT8-216ENST00000620483 4335 ntTSL 5 BASIC23.07■■□□□ 1.28
SMC5Q8IY18 KCNH2-203ENST00000430723 2648 ntTSL 5 BASIC23.07■■□□□ 1.28
SMC5Q8IY18 TRABD-201ENST00000303434 2329 ntAPPRIS P3 TSL 1 (best) BASIC23.07■■□□□ 1.28
SMC5Q8IY18 SLC35A3-217ENST00000639807 2767 ntTSL 5 BASIC23.06■■□□□ 1.28
SMC5Q8IY18 ENTPD6-209ENST00000433259 2654 ntTSL 5 BASIC23.06■■□□□ 1.28
SMC5Q8IY18 GUCY1A2-201ENST00000282249 3047 ntTSL 1 (best) BASIC23.06■■□□□ 1.28
SMC5Q8IY18 PRODH-205ENST00000420436 2034 ntAPPRIS ALT2 TSL 2 BASIC23.06■■□□□ 1.28
SMC5Q8IY18 LINC00535-201ENST00000501400 1914 ntTSL 1 (best) BASIC23.06■■□□□ 1.28
SMC5Q8IY18 NPEPL1-204ENST00000525967 1917 ntTSL 1 (best) BASIC23.06■■□□□ 1.28
SMC5Q8IY18 C1orf198-201ENST00000366663 3858 ntAPPRIS P3 TSL 1 (best) BASIC23.06■■□□□ 1.28
SMC5Q8IY18 HBA1-201ENST00000320868 577 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
SMC5Q8IY18 OOEP-AS1-201ENST00000445350 463 ntTSL 3 BASIC23.06■■□□□ 1.28
SMC5Q8IY18 AL445645.1-201ENST00000451318 1019 ntTSL 2 BASIC23.06■■□□□ 1.28
SMC5Q8IY18 ZNF561-AS1-202ENST00000586614 568 ntTSL 5 BASIC23.06■■□□□ 1.28
SMC5Q8IY18 TNNT1-208ENST00000587465 1065 ntAPPRIS ALT2 TSL 5 BASIC23.06■■□□□ 1.28
SMC5Q8IY18 CYGB-204ENST00000589342 815 ntTSL 3 BASIC23.06■■□□□ 1.28
SMC5Q8IY18 GRAMD4P8-201ENST00000605465 1115 ntBASIC23.06■■□□□ 1.28
SMC5Q8IY18 POC1B-GALNT4-201ENST00000547474 2207 ntTSL 2 BASIC23.06■■□□□ 1.28
SMC5Q8IY18 ASCL5-202ENST00000458416 1420 ntAPPRIS P1 BASIC23.06■■□□□ 1.28
SMC5Q8IY18 SLC39A5-201ENST00000266980 2031 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
SMC5Q8IY18 RGS20-203ENST00000344277 1667 ntTSL 1 (best) BASIC23.06■■□□□ 1.28
SMC5Q8IY18 IRF5-202ENST00000357234 1680 ntTSL 1 (best) BASIC23.06■■□□□ 1.28
SMC5Q8IY18 ADRA1A-201ENST00000276393 2281 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
SMC5Q8IY18 ACYP2-203ENST00000406041 1913 ntTSL 1 (best) BASIC23.06■■□□□ 1.28
SMC5Q8IY18 OARD1-202ENST00000424266 1337 ntAPPRIS P1 TSL 2 BASIC23.06■■□□□ 1.28
SMC5Q8IY18 CFAP46-201ENST00000368585 1825 ntAPPRIS ALT2 TSL 2 BASIC23.05■■□□□ 1.28
SMC5Q8IY18 PLEKHG4-201ENST00000360461 6782 ntAPPRIS P3 TSL 2 BASIC23.05■■□□□ 1.28
SMC5Q8IY18 SARAF-214ENST00000545648 1976 ntTSL 1 (best) BASIC23.05■■□□□ 1.28
SMC5Q8IY18 APOA5-201ENST00000227665 1897 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
SMC5Q8IY18 TFCP2-204ENST00000548115 1862 ntTSL 5 BASIC23.05■■□□□ 1.28
SMC5Q8IY18 LRRC43-201ENST00000339777 2028 ntAPPRIS P2 TSL 5 BASIC23.05■■□□□ 1.28
SMC5Q8IY18 MAPK9-208ENST00000455781 4336 ntAPPRIS ALT1 TSL 2 BASIC23.05■■□□□ 1.28
SMC5Q8IY18 MTCL1-201ENST00000306329 5718 ntAPPRIS ALT2 TSL 5 BASIC23.05■■□□□ 1.28
Retrieved 100 of 98,524 protein–RNA pairs in 23.2 ms