Protein–RNA interactions for Protein: Q8IWF9

CCDC83, Coiled-coil domain-containing protein 83, humanhuman

Predictions only

Length 413 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC83Q8IWF9 MYH7B-201ENST00000262873 6293 ntAPPRIS P2 TSL 1 (best) BASIC21.93■■□□□ 1.1
CCDC83Q8IWF9 KCNQ5-203ENST00000355635 6623 ntAPPRIS ALT1 TSL 5 BASIC21.93■■□□□ 1.1
CCDC83Q8IWF9 NUDT4-202ENST00000415493 4839 ntAPPRIS ALT1 TSL 1 (best) BASIC21.93■■□□□ 1.1
CCDC83Q8IWF9 SRMS-201ENST00000217188 1516 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
CCDC83Q8IWF9 C20orf27-201ENST00000217195 1302 ntTSL 2 BASIC21.93■■□□□ 1.1
CCDC83Q8IWF9 ACSM2A-201ENST00000219054 1988 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
CCDC83Q8IWF9 LYPD3-201ENST00000244333 1694 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
CCDC83Q8IWF9 LYSMD4-201ENST00000332728 2847 ntTSL 4 BASIC21.93■■□□□ 1.1
CCDC83Q8IWF9 BSX-201ENST00000343035 830 ntAPPRIS P1 TSL 5 BASIC21.93■■□□□ 1.1
CCDC83Q8IWF9 SPNS1-204ENST00000352260 1948 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
CCDC83Q8IWF9 CLN3-206ENST00000360019 1840 ntTSL 2 BASIC21.93■■□□□ 1.1
CCDC83Q8IWF9 TNFRSF19-202ENST00000382258 1625 ntAPPRIS P4 TSL 1 (best) BASIC21.93■■□□□ 1.1
CCDC83Q8IWF9 TMC6-203ENST00000392467 2833 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
CCDC83Q8IWF9 IMMP2L-202ENST00000405709 1522 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
CCDC83Q8IWF9 SRI-203ENST00000419179 1307 ntTSL 2 BASIC21.93■■□□□ 1.1
CCDC83Q8IWF9 SETMAR-206ENST00000430981 1671 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
CCDC83Q8IWF9 NDUFS3-212ENST00000534208 583 ntTSL 4 BASIC21.93■■□□□ 1.1
CCDC83Q8IWF9 SLC2A14-214ENST00000542505 1650 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
CCDC83Q8IWF9 AC142381.4-202ENST00000563973 229 ntBASIC21.93■■□□□ 1.1
CCDC83Q8IWF9 ANAPC11-207ENST00000572639 578 ntAPPRIS P1 TSL 3 BASIC21.93■■□□□ 1.1
CCDC83Q8IWF9 KRT13-208ENST00000587544 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC21.93■■□□□ 1.1
CCDC83Q8IWF9 AP000692.2-201ENST00000608391 879 ntBASIC21.93■■□□□ 1.1
CCDC83Q8IWF9 AC008622.2-201ENST00000617006 1229 ntBASIC21.93■■□□□ 1.1
CCDC83Q8IWF9 IFNL4-203ENST00000634680 1421 ntAPPRIS ALT2 TSL 1 (best) BASIC21.93■■□□□ 1.1
CCDC83Q8IWF9 UBXN2A-201ENST00000309033 6066 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
CCDC83Q8IWF9 HTATSF1-204ENST00000535601 3019 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
CCDC83Q8IWF9 FBXL15-201ENST00000224862 2362 ntAPPRIS P2 TSL 1 (best) BASIC21.92■■□□□ 1.1
CCDC83Q8IWF9 ANKRD18DP-201ENST00000335478 2171 ntTSL 2 BASIC21.92■■□□□ 1.1
CCDC83Q8IWF9 CCDC43-201ENST00000315286 2082 ntAPPRIS P2 TSL 1 (best) BASIC21.92■■□□□ 1.1
CCDC83Q8IWF9 PLCL2-204ENST00000615277 4147 ntAPPRIS ALT2 TSL 1 (best) BASIC21.92■■□□□ 1.1
CCDC83Q8IWF9 ABALON-201ENST00000629058 1903 ntBASIC21.92■■□□□ 1.1
CCDC83Q8IWF9 PDIA5-201ENST00000316218 1799 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
CCDC83Q8IWF9 MRPL3-201ENST00000264995 1706 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
CCDC83Q8IWF9 PSTK-201ENST00000368887 1705 ntAPPRIS P2 TSL 1 (best) BASIC21.92■■□□□ 1.1
CCDC83Q8IWF9 IFNLR1-202ENST00000327575 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC21.92■■□□□ 1.1
CCDC83Q8IWF9 FSCN1P1-201ENST00000568912 1481 ntBASIC21.92■■□□□ 1.1
CCDC83Q8IWF9 KHDC1-202ENST00000370384 1430 ntAPPRIS ALT2 TSL 1 (best) BASIC21.92■■□□□ 1.1
CCDC83Q8IWF9 LRRC23-207ENST00000433346 1387 ntTSL 5 BASIC21.92■■□□□ 1.1
CCDC83Q8IWF9 ADAMTS16-203ENST00000511368 2682 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
CCDC83Q8IWF9 MRPL15-201ENST00000260102 1147 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
CCDC83Q8IWF9 RAMP1-204ENST00000409726 734 ntTSL 3 BASIC21.92■■□□□ 1.1
CCDC83Q8IWF9 AC100835.1-201ENST00000565737 498 ntTSL 5 BASIC21.92■■□□□ 1.1
CCDC83Q8IWF9 GRAP-204ENST00000573099 846 ntTSL 3 BASIC21.92■■□□□ 1.1
CCDC83Q8IWF9 IL15-201ENST00000296545 2472 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
CCDC83Q8IWF9 KANK4-204ENST00000371153 4665 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
CCDC83Q8IWF9 NRBP1-203ENST00000379852 2163 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
CCDC83Q8IWF9 TTC22-201ENST00000371274 2149 ntTSL 2 BASIC21.92■■□□□ 1.1
CCDC83Q8IWF9 C19orf25-207ENST00000588871 2128 ntTSL 5 BASIC21.92■■□□□ 1.1
CCDC83Q8IWF9 APP-203ENST00000354192 3167 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
CCDC83Q8IWF9 MYO9A-214ENST00000566885 5111 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
CCDC83Q8IWF9 RPS6KB1-204ENST00000443572 1913 ntTSL 2 BASIC21.92■■□□□ 1.1
CCDC83Q8IWF9 PANX1-201ENST00000227638 2769 ntAPPRIS P2 TSL 1 (best) BASIC21.92■■□□□ 1.1
CCDC83Q8IWF9 VIPR1-201ENST00000325123 2773 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
CCDC83Q8IWF9 UBE3C-201ENST00000348165 5229 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
CCDC83Q8IWF9 FMR1-206ENST00000370477 3437 ntTSL 5 BASIC21.92■■□□□ 1.1
CCDC83Q8IWF9 FAM118A-202ENST00000405673 1612 ntTSL 5 BASIC21.91■■□□□ 1.1
CCDC83Q8IWF9 HNF1A-202ENST00000400024 2337 ntTSL 2 BASIC21.91■■□□□ 1.1
CCDC83Q8IWF9 NOMO1-201ENST00000287667 4355 ntAPPRIS P2 TSL 1 (best) BASIC21.91■■□□□ 1.1
CCDC83Q8IWF9 NOMO3-202ENST00000399336 4356 ntAPPRIS P2 TSL 1 (best) BASIC21.91■■□□□ 1.1
CCDC83Q8IWF9 RNFT2-202ENST00000319176 2180 ntTSL 5 BASIC21.91■■□□□ 1.1
CCDC83Q8IWF9 CD151-213ENST00000528011 1369 ntAPPRIS ALT1 TSL 5 BASIC21.91■■□□□ 1.1
CCDC83Q8IWF9 AC008556.1-201ENST00000610908 2040 ntBASIC21.91■■□□□ 1.1
CCDC83Q8IWF9 CADPS2-208ENST00000615869 6066 ntAPPRIS ALT1 TSL 5 BASIC21.91■■□□□ 1.1
CCDC83Q8IWF9 CCDC157-201ENST00000338306 3001 ntAPPRIS P3 TSL 5 BASIC21.91■■□□□ 1.1
CCDC83Q8IWF9 MAPKAP1-205ENST00000373503 3045 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
CCDC83Q8IWF9 TMEM104-202ENST00000417024 1781 ntTSL 2 BASIC21.91■■□□□ 1.1
CCDC83Q8IWF9 OGFOD3-202ENST00000329197 1652 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
CCDC83Q8IWF9 USP39-201ENST00000323701 2177 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
CCDC83Q8IWF9 SLC25A29-215ENST00000556505 1540 ntTSL 2 BASIC21.9■■□□□ 1.1
CCDC83Q8IWF9 GPC2-201ENST00000292377 2532 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
CCDC83Q8IWF9 PCCA-202ENST00000376285 2494 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
CCDC83Q8IWF9 NOMO2-201ENST00000330537 4352 ntAPPRIS ALT2 TSL 5 BASIC21.9■■□□□ 1.1
CCDC83Q8IWF9 KRT8P45-201ENST00000414328 1447 ntBASIC21.9■■□□□ 1.1
CCDC83Q8IWF9 BANP-223ENST00000538234 2372 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
CCDC83Q8IWF9 THOP1-205ENST00000586677 1872 ntTSL 2 BASIC21.9■■□□□ 1.1
CCDC83Q8IWF9 SEMA6D-205ENST00000389425 2318 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
CCDC83Q8IWF9 CD70-201ENST00000245903 913 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
CCDC83Q8IWF9 LYPD1-201ENST00000345008 1033 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
CCDC83Q8IWF9 C6orf132-202ENST00000356542 894 ntAPPRIS ALT2 TSL 2 BASIC21.9■■□□□ 1.1
CCDC83Q8IWF9 MTHFD1L-201ENST00000367307 1049 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
CCDC83Q8IWF9 LINC01122-201ENST00000422723 675 ntTSL 3 BASIC21.9■■□□□ 1.1
CCDC83Q8IWF9 AL158047.1-201ENST00000445918 881 ntBASIC21.9■■□□□ 1.1
CCDC83Q8IWF9 FAM86C2P-201ENST00000525180 435 ntTSL 4 BASIC21.9■■□□□ 1.1
CCDC83Q8IWF9 AF131216.3-201ENST00000525867 1099 ntTSL 2 BASIC21.9■■□□□ 1.1
CCDC83Q8IWF9 AC103855.2-201ENST00000533315 573 ntTSL 4 BASIC21.9■■□□□ 1.1
CCDC83Q8IWF9 NCOA6-207ENST00000616167 3271 ntAPPRIS ALT2 TSL 5 BASIC21.9■■□□□ 1.1
CCDC83Q8IWF9 MINOS1-NBL1-204ENST00000602662 1623 ntAPPRIS P1 TSL 2 BASIC21.9■■□□□ 1.1
CCDC83Q8IWF9 PMEPA1-202ENST00000341744 4845 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
CCDC83Q8IWF9 OBSL1-203ENST00000373876 5503 ntTSL 5 BASIC21.9■■□□□ 1.1
CCDC83Q8IWF9 PPM1G-201ENST00000344034 2311 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
CCDC83Q8IWF9 MCCC1-215ENST00000629669 2316 ntTSL 5 BASIC21.9■■□□□ 1.1
CCDC83Q8IWF9 RIOX2-201ENST00000333396 5347 ntAPPRIS ALT1 TSL 1 (best) BASIC21.9■■□□□ 1.1
CCDC83Q8IWF9 AC096719.1-201ENST00000510705 1874 ntTSL 5 BASIC21.9■■□□□ 1.1
CCDC83Q8IWF9 DNAH17-AS1-202ENST00000591373 1453 ntTSL 5 BASIC21.9■■□□□ 1.1
CCDC83Q8IWF9 MAP4K4-204ENST00000350198 7316 ntTSL 5 BASIC21.9■■□□□ 1.1
CCDC83Q8IWF9 PPP2R2C-209ENST00000515571 1832 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
CCDC83Q8IWF9 SLC9A6-201ENST00000370695 4725 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.1
CCDC83Q8IWF9 NR4A2-204ENST00000409572 2878 ntAPPRIS P1 TSL 5 BASIC21.89■■□□□ 1.1
CCDC83Q8IWF9 GPATCH3-201ENST00000361720 2123 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.1
CCDC83Q8IWF9 SAMD11-212ENST00000617307 2314 ntAPPRIS ALT2 TSL 5 BASIC21.89■■□□□ 1.1
Retrieved 100 of 98,524 protein–RNA pairs in 34.1 ms