Protein–RNA interactions for Protein: Q8IVW4

CDKL3, Cyclin-dependent kinase-like 3, humanhuman

Predicted RBP Predictions only

Length 592 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL3Q8IVW4 AC004803.1-203ENST00000539259 501 ntTSL 2 BASIC19.18■□□□□ 0.66
CDKL3Q8IVW4 REXO2-216ENST00000544196 452 ntTSL 3 BASIC19.18■□□□□ 0.66
CDKL3Q8IVW4 GCHFR-205ENST00000559932 695 ntTSL 2 BASIC19.18■□□□□ 0.66
CDKL3Q8IVW4 LINC02167-201ENST00000562769 594 ntTSL 3 BASIC19.18■□□□□ 0.66
CDKL3Q8IVW4 TGIF1-222ENST00000577543 729 ntTSL 3 BASIC19.18■□□□□ 0.66
CDKL3Q8IVW4 AC008622.2-201ENST00000617006 1229 ntBASIC19.18■□□□□ 0.66
CDKL3Q8IVW4 CCDC17-202ENST00000421127 2216 ntAPPRIS ALT2 TSL 2 BASIC19.18■□□□□ 0.66
CDKL3Q8IVW4 MTSS1L-204ENST00000616026 2241 ntAPPRIS ALT2 TSL 5 BASIC19.18■□□□□ 0.66
CDKL3Q8IVW4 PLA2G2F-201ENST00000375102 2723 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CDKL3Q8IVW4 EFHC1-206ENST00000635760 2030 ntTSL 5 BASIC19.18■□□□□ 0.66
CDKL3Q8IVW4 PRMT1-201ENST00000391851 1393 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CDKL3Q8IVW4 DYNLL1-209ENST00000550845 1376 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
CDKL3Q8IVW4 CASD1-201ENST00000297273 3942 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CDKL3Q8IVW4 ADGRD2-201ENST00000334810 3244 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
CDKL3Q8IVW4 RBM24-202ENST00000379052 2703 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CDKL3Q8IVW4 POLR3E-209ENST00000564209 2464 ntTSL 2 BASIC19.17■□□□□ 0.66
CDKL3Q8IVW4 CLASRP-201ENST00000221455 2234 ntAPPRIS P2 TSL 1 (best) BASIC19.17■□□□□ 0.66
CDKL3Q8IVW4 TBC1D4-204ENST00000431480 6347 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
CDKL3Q8IVW4 HOXC11-201ENST00000243082 2039 ntTSL 3 BASIC19.17■□□□□ 0.66
CDKL3Q8IVW4 MLLT1-201ENST00000252674 4507 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CDKL3Q8IVW4 EIF5-201ENST00000216554 5945 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CDKL3Q8IVW4 UBE2QL1-201ENST00000399816 4317 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CDKL3Q8IVW4 C6orf118-201ENST00000230301 1812 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CDKL3Q8IVW4 CHTOP-207ENST00000614256 1840 ntTSL 3 BASIC19.17■□□□□ 0.66
CDKL3Q8IVW4 TRIM41-202ENST00000351937 2696 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
CDKL3Q8IVW4 FAM26F-202ENST00000368605 1117 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
CDKL3Q8IVW4 GPR75-201ENST00000394705 2115 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CDKL3Q8IVW4 PMEPA1-204ENST00000395814 800 ntTSL 3 BASIC19.17■□□□□ 0.66
CDKL3Q8IVW4 GPM6B-204ENST00000398361 1033 ntTSL 2 BASIC19.17■□□□□ 0.66
CDKL3Q8IVW4 MRPL36-202ENST00000505059 610 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CDKL3Q8IVW4 CYGB-204ENST00000589342 815 ntTSL 3 BASIC19.17■□□□□ 0.66
CDKL3Q8IVW4 ASZ1-201ENST00000284629 1865 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CDKL3Q8IVW4 RELL2-202ENST00000444782 2154 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CDKL3Q8IVW4 DPP10-203ENST00000393147 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
CDKL3Q8IVW4 MME-217ENST00000616757 1315 ntTSL 5 BASIC19.17■□□□□ 0.66
CDKL3Q8IVW4 GPR135-201ENST00000395116 4578 ntAPPRIS P1 BASIC19.17■□□□□ 0.66
CDKL3Q8IVW4 TBC1D3P2-202ENST00000577902 1649 ntBASIC19.17■□□□□ 0.66
CDKL3Q8IVW4 AK1-203ENST00000373176 2266 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CDKL3Q8IVW4 LYPD3-201ENST00000244333 1694 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CDKL3Q8IVW4 KHDC1-202ENST00000370384 1430 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
CDKL3Q8IVW4 EHMT1-203ENST00000460843 5137 ntAPPRIS P2 TSL 5 BASIC19.16■□□□□ 0.66
CDKL3Q8IVW4 SLC39A7-201ENST00000374675 2153 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CDKL3Q8IVW4 CCDC17-209ENST00000528266 2181 ntAPPRIS P3 TSL 2 BASIC19.16■□□□□ 0.66
CDKL3Q8IVW4 AL354751.1-201ENST00000412768 1863 ntBASIC19.16■□□□□ 0.66
CDKL3Q8IVW4 AL162741.1-201ENST00000565563 1558 ntBASIC19.16■□□□□ 0.66
CDKL3Q8IVW4 GNAS-AS1-202ENST00000443966 2341 ntTSL 5 BASIC19.16■□□□□ 0.66
CDKL3Q8IVW4 NDUFA12-201ENST00000327772 635 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CDKL3Q8IVW4 PMVK-201ENST00000368467 1280 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CDKL3Q8IVW4 BUB3-202ENST00000368859 667 ntTSL 3 BASIC19.16■□□□□ 0.66
CDKL3Q8IVW4 MCCD1P1-208ENST00000445732 328 ntBASIC19.16■□□□□ 0.66
CDKL3Q8IVW4 IGHMBP2-205ENST00000539224 785 ntTSL 3 BASIC19.16■□□□□ 0.66
CDKL3Q8IVW4 AL354712.1-201ENST00000563570 477 ntTSL 3 BASIC19.16■□□□□ 0.66
CDKL3Q8IVW4 AP005263.1-201ENST00000579126 914 ntTSL 2 BASIC19.16■□□□□ 0.66
CDKL3Q8IVW4 AC003005.1-201ENST00000601674 582 ntAPPRIS P5 TSL 2 BASIC19.16■□□□□ 0.66
CDKL3Q8IVW4 REXO1L10P-201ENST00000615707 1290 ntBASIC19.16■□□□□ 0.66
CDKL3Q8IVW4 REXO1L12P-201ENST00000622156 912 ntBASIC19.16■□□□□ 0.66
CDKL3Q8IVW4 SLC2A14-214ENST00000542505 1650 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
CDKL3Q8IVW4 SYT15-205ENST00000503753 1331 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
CDKL3Q8IVW4 TMEM206-201ENST00000261455 2475 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CDKL3Q8IVW4 SYT3-206ENST00000600079 2463 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CDKL3Q8IVW4 CAMKK2-207ENST00000404169 2116 ntAPPRIS P4 TSL 1 (best) BASIC19.16■□□□□ 0.66
CDKL3Q8IVW4 UNC5B-201ENST00000335350 6841 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CDKL3Q8IVW4 KCNIP4-205ENST00000382152 1767 ntTSL 5 BASIC19.16■□□□□ 0.66
CDKL3Q8IVW4 PLPPR2-208ENST00000591608 2552 ntAPPRIS ALT2 TSL 2 BASIC19.16■□□□□ 0.66
CDKL3Q8IVW4 SLC47A2-201ENST00000325411 2258 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
CDKL3Q8IVW4 MRPL3-202ENST00000425847 1457 ntTSL 2 BASIC19.16■□□□□ 0.66
CDKL3Q8IVW4 OGFOD2-222ENST00000545317 1481 ntTSL 2 BASIC19.16■□□□□ 0.66
CDKL3Q8IVW4 PHB2-203ENST00000535923 1515 ntAPPRIS P2 TSL 5 BASIC19.15■□□□□ 0.66
CDKL3Q8IVW4 CHD1L-204ENST00000431239 2907 ntTSL 5 BASIC19.15■□□□□ 0.66
CDKL3Q8IVW4 AC008556.1-201ENST00000610908 2040 ntBASIC19.15■□□□□ 0.66
CDKL3Q8IVW4 SPAG9-202ENST00000357122 4761 ntAPPRIS P2 TSL 1 (best) BASIC19.15■□□□□ 0.66
CDKL3Q8IVW4 AL445433.2-201ENST00000425113 2544 ntTSL 2 BASIC19.15■□□□□ 0.66
CDKL3Q8IVW4 APLP2-210ENST00000528499 2530 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
CDKL3Q8IVW4 CPT2-207ENST00000636867 2643 ntTSL 5 BASIC19.15■□□□□ 0.66
CDKL3Q8IVW4 PRDX1-201ENST00000262746 1234 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
CDKL3Q8IVW4 ZCCHC24-201ENST00000372333 906 ntTSL 2 BASIC19.15■□□□□ 0.66
CDKL3Q8IVW4 MDFI-202ENST00000373050 809 ntTSL 2 BASIC19.15■□□□□ 0.66
CDKL3Q8IVW4 RAP1B-203ENST00000378985 1017 ntTSL 2 BASIC19.15■□□□□ 0.66
CDKL3Q8IVW4 UBB-203ENST00000395839 1012 ntAPPRIS P1 TSL 2 BASIC19.15■□□□□ 0.66
CDKL3Q8IVW4 DUSP15-205ENST00000398084 1256 ntTSL 5 BASIC19.15■□□□□ 0.66
CDKL3Q8IVW4 AL023284.2-201ENST00000405850 579 ntBASIC19.15■□□□□ 0.66
CDKL3Q8IVW4 FDX2-206ENST00000492239 773 ntTSL 2 BASIC19.15■□□□□ 0.66
CDKL3Q8IVW4 BNIP3L-206ENST00000523515 915 ntTSL 2 BASIC19.15■□□□□ 0.66
CDKL3Q8IVW4 RAP1B-221ENST00000540209 1264 ntTSL 2 BASIC19.15■□□□□ 0.66
CDKL3Q8IVW4 TNFRSF12A-206ENST00000575124 1133 ntTSL 2 BASIC19.15■□□□□ 0.66
CDKL3Q8IVW4 AC008649.1-201ENST00000589557 516 ntTSL 2 BASIC19.15■□□□□ 0.66
CDKL3Q8IVW4 GRAMD4P8-201ENST00000605465 1115 ntBASIC19.15■□□□□ 0.66
CDKL3Q8IVW4 AC026471.5-201ENST00000615068 467 ntBASIC19.15■□□□□ 0.66
CDKL3Q8IVW4 CLN3-206ENST00000360019 1840 ntTSL 2 BASIC19.15■□□□□ 0.66
CDKL3Q8IVW4 RBP4-202ENST00000371467 1314 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
CDKL3Q8IVW4 DBX1-201ENST00000524983 1380 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
CDKL3Q8IVW4 COL18A1-202ENST00000355480 5924 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
CDKL3Q8IVW4 SORBS3-221ENST00000523965 2028 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
CDKL3Q8IVW4 EEF1AKMT2-201ENST00000368836 1462 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CDKL3Q8IVW4 XYLT2-203ENST00000507602 2107 ntTSL 2 BASIC19.15■□□□□ 0.66
CDKL3Q8IVW4 AC011416.4-201ENST00000639283 2195 ntTSL 5 BASIC19.15■□□□□ 0.66
CDKL3Q8IVW4 FOXI3-201ENST00000428390 2804 ntAPPRIS P1 TSL 3 BASIC19.15■□□□□ 0.66
CDKL3Q8IVW4 ZBTB10-205ENST00000610895 2833 ntAPPRIS ALT2 TSL 2 BASIC19.15■□□□□ 0.66
CDKL3Q8IVW4 MATN4-203ENST00000372754 2200 ntAPPRIS ALT2 TSL 5 BASIC19.15■□□□□ 0.66
CDKL3Q8IVW4 TXNRD3-203ENST00000524230 2950 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 36.9 ms