Protein–RNA interactions for Protein: Q86YS6

RAB43, Ras-related protein Rab-43, humanhuman

Predictions only

Length 212 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB43Q86YS6 BUB3-202ENST00000368859 667 ntTSL 3 BASIC17.8■□□□□ 0.44
RAB43Q86YS6 PTGDS-202ENST00000371625 807 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
RAB43Q86YS6 AC114763.1-202ENST00000414911 867 ntTSL 3 BASIC17.8■□□□□ 0.44
RAB43Q86YS6 TSPY21P-201ENST00000433481 731 ntBASIC17.8■□□□□ 0.44
RAB43Q86YS6 CR769775.1-204ENST00000439760 747 ntTSL 5 BASIC17.8■□□□□ 0.44
RAB43Q86YS6 AP000777.3-201ENST00000538705 491 ntTSL 3 BASIC17.8■□□□□ 0.44
RAB43Q86YS6 NEK4P2-201ENST00000580004 1012 ntBASIC17.8■□□□□ 0.44
RAB43Q86YS6 AL121956.5-201ENST00000625261 221 ntBASIC17.8■□□□□ 0.44
RAB43Q86YS6 C22orf39-205ENST00000542103 1523 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
RAB43Q86YS6 PCDHB11-202ENST00000624887 1973 ntTSL 2 BASIC17.8■□□□□ 0.44
RAB43Q86YS6 GABRD-205ENST00000638771 1707 ntAPPRIS ALT2 TSL 3 BASIC17.8■□□□□ 0.44
RAB43Q86YS6 AC125437.2-201ENST00000625180 2167 ntBASIC17.8■□□□□ 0.44
RAB43Q86YS6 ISOC1-201ENST00000173527 1940 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
RAB43Q86YS6 PFDN6-206ENST00000463584 1915 ntTSL 3 BASIC17.8■□□□□ 0.44
RAB43Q86YS6 ADAMTS7-201ENST00000388820 5490 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
RAB43Q86YS6 C19orf25-207ENST00000588871 2128 ntTSL 5 BASIC17.8■□□□□ 0.44
RAB43Q86YS6 AC006001.3-204ENST00000638711 2103 ntTSL 5 BASIC17.8■□□□□ 0.44
RAB43Q86YS6 MZF1-206ENST00000599369 2587 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
RAB43Q86YS6 CHPF-201ENST00000243776 3013 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
RAB43Q86YS6 WDSUB1-203ENST00000392796 1812 ntAPPRIS P1 TSL 2 BASIC17.79■□□□□ 0.44
RAB43Q86YS6 BEST4-201ENST00000372207 2047 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
RAB43Q86YS6 MRPL2-202ENST00000388752 1588 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
RAB43Q86YS6 TAF5L-201ENST00000258281 3112 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
RAB43Q86YS6 EHMT1-203ENST00000460843 5137 ntAPPRIS P2 TSL 5 BASIC17.79■□□□□ 0.44
RAB43Q86YS6 THTPA-202ENST00000404535 1779 ntAPPRIS P1 TSL 2 BASIC17.79■□□□□ 0.44
RAB43Q86YS6 AC104417.2-201ENST00000562989 1793 ntBASIC17.79■□□□□ 0.44
RAB43Q86YS6 FRRS1L-201ENST00000561981 8197 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
RAB43Q86YS6 RBM15B-201ENST00000563281 6641 ntAPPRIS P1 BASIC17.79■□□□□ 0.44
RAB43Q86YS6 UCHL5-202ENST00000367449 1507 ntAPPRIS ALT1 TSL 1 (best) BASIC17.79■□□□□ 0.44
RAB43Q86YS6 PTMS-201ENST00000309083 1139 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
RAB43Q86YS6 YPEL3-201ENST00000398838 935 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
RAB43Q86YS6 AC074183.1-201ENST00000439105 782 ntTSL 5 BASIC17.79■□□□□ 0.44
RAB43Q86YS6 AL359075.1-203ENST00000462729 1002 ntBASIC17.79■□□□□ 0.44
RAB43Q86YS6 AP006284.1-202ENST00000527113 527 ntTSL 4 BASIC17.79■□□□□ 0.44
RAB43Q86YS6 TMEM218-206ENST00000527766 812 ntAPPRIS P1 TSL 3 BASIC17.79■□□□□ 0.44
RAB43Q86YS6 MRPL46-202ENST00000558531 1002 ntTSL 2 BASIC17.79■□□□□ 0.44
RAB43Q86YS6 YIPF2-209ENST00000590329 958 ntTSL 5 BASIC17.79■□□□□ 0.44
RAB43Q86YS6 AC008622.2-201ENST00000617006 1229 ntBASIC17.79■□□□□ 0.44
RAB43Q86YS6 FBXL22-204ENST00000638704 729 ntAPPRIS ALT2 TSL 2 BASIC17.79■□□□□ 0.44
RAB43Q86YS6 DCHS2-201ENST00000339452 5064 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
RAB43Q86YS6 KIAA1549-201ENST00000422774 6283 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
RAB43Q86YS6 SPHK1-207ENST00000590959 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
RAB43Q86YS6 TMEM255B-202ENST00000375353 6100 ntAPPRIS P2 TSL 1 (best) BASIC17.79■□□□□ 0.44
RAB43Q86YS6 SPON2-203ENST00000431380 1802 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
RAB43Q86YS6 UMOD-202ENST00000396134 2408 ntAPPRIS ALT2 TSL 2 BASIC17.79■□□□□ 0.44
RAB43Q86YS6 ISLR2-210ENST00000565540 2780 ntAPPRIS P1 TSL 4 BASIC17.79■□□□□ 0.44
RAB43Q86YS6 EIF3J-201ENST00000261868 2569 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
RAB43Q86YS6 NOL3-211ENST00000568146 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
RAB43Q86YS6 AVL9-209ENST00000640103 1367 ntTSL 5 BASIC17.79■□□□□ 0.44
RAB43Q86YS6 POLD3-203ENST00000527458 2122 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
RAB43Q86YS6 EIF2AK3-201ENST00000303236 4646 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
RAB43Q86YS6 RAB5C-202ENST00000393860 1912 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
RAB43Q86YS6 TMSB4X-203ENST00000380636 1702 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
RAB43Q86YS6 PHB2-203ENST00000535923 1515 ntAPPRIS P2 TSL 5 BASIC17.78■□□□□ 0.44
RAB43Q86YS6 CADPS2-201ENST00000313070 6065 ntTSL 5 BASIC17.78■□□□□ 0.44
RAB43Q86YS6 DGKI-202ENST00000424189 4163 ntAPPRIS ALT2 TSL 5 BASIC17.78■□□□□ 0.44
RAB43Q86YS6 HAGHL-203ENST00000389703 1347 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
RAB43Q86YS6 KAT5-203ENST00000377046 2237 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
RAB43Q86YS6 ADK-206ENST00000541550 2222 ntTSL 2 BASIC17.78■□□□□ 0.44
RAB43Q86YS6 GUCA1B-201ENST00000230361 1113 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
RAB43Q86YS6 UPK3B-201ENST00000257632 1296 ntAPPRIS P5 TSL 2 BASIC17.78■□□□□ 0.44
RAB43Q86YS6 TYMSOS-201ENST00000323813 844 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
RAB43Q86YS6 APBB3-216ENST00000511201 1014 ntTSL 5 BASIC17.78■□□□□ 0.44
RAB43Q86YS6 CD320-202ENST00000537716 1119 ntTSL 2 BASIC17.78■□□□□ 0.44
RAB43Q86YS6 MTHFS-202ENST00000559722 948 ntTSL 2 BASIC17.78■□□□□ 0.44
RAB43Q86YS6 AL441883.1-201ENST00000566170 1045 ntBASIC17.78■□□□□ 0.44
RAB43Q86YS6 AC132938.3-201ENST00000579095 357 ntTSL 2 BASIC17.78■□□□□ 0.44
RAB43Q86YS6 C1QTNF8-202ENST00000621771 897 ntTSL 5 BASIC17.78■□□□□ 0.44
RAB43Q86YS6 AP000550.4-202ENST00000639755 178 ntBASIC17.78■□□□□ 0.44
RAB43Q86YS6 SEMA6D-205ENST00000389425 2318 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
RAB43Q86YS6 NLRP6-201ENST00000312165 2679 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
RAB43Q86YS6 CERS4-201ENST00000251363 1797 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
RAB43Q86YS6 NAGPA-AS1-202ENST00000632058 2265 ntTSL 2 BASIC17.78■□□□□ 0.44
RAB43Q86YS6 TEAD2-202ENST00000377214 2440 ntAPPRIS ALT1 TSL 2 BASIC17.78■□□□□ 0.44
RAB43Q86YS6 PLPBP-201ENST00000328195 2558 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
RAB43Q86YS6 ADORA2A-213ENST00000610595 2736 ntAPPRIS P1 TSL 2 BASIC17.78■□□□□ 0.44
RAB43Q86YS6 DAG1-219ENST00000538711 5582 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.44
RAB43Q86YS6 PAFAH1B2-202ENST00000419197 2517 ntTSL 2 BASIC17.77■□□□□ 0.44
RAB43Q86YS6 KCNA7-201ENST00000221444 4372 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
RAB43Q86YS6 KCNK4-202ENST00000422670 1697 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
RAB43Q86YS6 UMOD-201ENST00000302509 2477 ntAPPRIS P3 TSL 5 BASIC17.77■□□□□ 0.44
RAB43Q86YS6 GTF2IP4-202ENST00000544802 3609 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
RAB43Q86YS6 CLIP2-202ENST00000361545 5445 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
RAB43Q86YS6 CASD1-201ENST00000297273 3942 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
RAB43Q86YS6 KRT6C-201ENST00000252250 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
RAB43Q86YS6 KRT6B-201ENST00000252252 2282 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
RAB43Q86YS6 GAS2L1-208ENST00000616432 2925 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
RAB43Q86YS6 CBR1-205ENST00000530908 1924 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
RAB43Q86YS6 LEMD2-214ENST00000614475 2883 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.44
RAB43Q86YS6 TSPAN14-202ENST00000341863 1037 ntTSL 5 BASIC17.77■□□□□ 0.44
RAB43Q86YS6 Telomerase-vert.1-201ENST00000363312 438 ntBASIC17.77■□□□□ 0.44
RAB43Q86YS6 NPM3-201ENST00000370110 877 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
RAB43Q86YS6 ISCU-202ENST00000392807 1069 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
RAB43Q86YS6 ISCU-203ENST00000431221 799 ntTSL 2 BASIC17.77■□□□□ 0.44
RAB43Q86YS6 AC009947.2-201ENST00000444014 672 ntBASIC17.77■□□□□ 0.44
RAB43Q86YS6 AL671277.2-201ENST00000458060 996 ntBASIC17.77■□□□□ 0.44
RAB43Q86YS6 SURF4-206ENST00000485435 1206 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
RAB43Q86YS6 CCNJL-205ENST00000519673 940 ntTSL 2 BASIC17.77■□□□□ 0.44
RAB43Q86YS6 AC004448.5-201ENST00000579897 567 ntTSL 5 BASIC17.77■□□□□ 0.44
RAB43Q86YS6 FAM104A-205ENST00000581110 512 ntTSL 2 BASIC17.77■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 21.9 ms