Protein–RNA interactions for Protein: Q86VP3

PACS2, Phosphofurin acidic cluster sorting protein 2, humanhuman

Predictions only

Length 889 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PACS2Q86VP3 RGL3-201ENST00000380456 2542 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
PACS2Q86VP3 CD5L-201ENST00000368174 2191 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
PACS2Q86VP3 ZNF281-201ENST00000294740 4891 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
PACS2Q86VP3 SH3BP5-202ENST00000383791 2822 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
PACS2Q86VP3 HOXC11-201ENST00000243082 2039 ntTSL 3 BASIC18.76■□□□□ 0.59
PACS2Q86VP3 MST1R-214ENST00000613534 2025 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
PACS2Q86VP3 NUDT4-202ENST00000415493 4839 ntAPPRIS ALT1 TSL 1 (best) BASIC18.76■□□□□ 0.59
PACS2Q86VP3 UGP2-202ENST00000394417 2136 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
PACS2Q86VP3 TEX21P-204ENST00000641479 1693 ntBASIC18.76■□□□□ 0.59
PACS2Q86VP3 TMPRSS5-208ENST00000544476 1320 ntTSL 2 BASIC18.75■□□□□ 0.59
PACS2Q86VP3 ADAM15-205ENST00000360674 2732 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
PACS2Q86VP3 AL121758.1-201ENST00000488788 2714 ntAPPRIS P1 TSL 2 BASIC18.75■□□□□ 0.59
PACS2Q86VP3 SEPT9-237ENST00000591198 2160 ntTSL 2 BASIC18.75■□□□□ 0.59
PACS2Q86VP3 TMEM130-202ENST00000345589 2261 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
PACS2Q86VP3 PCDHB19P-201ENST00000570871 2371 ntBASIC18.75■□□□□ 0.59
PACS2Q86VP3 RAB28-201ENST00000288723 1810 ntAPPRIS P3 TSL 1 (best) BASIC18.75■□□□□ 0.59
PACS2Q86VP3 SCARB1-208ENST00000544327 1812 ntTSL 5 BASIC18.75■□□□□ 0.59
PACS2Q86VP3 PDE1B-201ENST00000243052 3444 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
PACS2Q86VP3 POLR1D-220ENST00000637071 1943 ntTSL 5 BASIC18.75■□□□□ 0.59
PACS2Q86VP3 RAB43-201ENST00000315150 4467 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
PACS2Q86VP3 SMARCC1-201ENST00000254480 6375 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
PACS2Q86VP3 FAM207A-202ENST00000397826 880 ntAPPRIS ALT1 TSL 1 (best) BASIC18.75■□□□□ 0.59
PACS2Q86VP3 PGM5P4-201ENST00000421970 445 ntBASIC18.75■□□□□ 0.59
PACS2Q86VP3 IDH1-AS1-202ENST00000448588 489 ntTSL 3 BASIC18.75■□□□□ 0.59
PACS2Q86VP3 DNAJA4-210ENST00000489435 947 ntTSL 3 BASIC18.75■□□□□ 0.59
PACS2Q86VP3 PDXDC2P-202ENST00000527016 543 ntTSL 3 BASIC18.75■□□□□ 0.59
PACS2Q86VP3 RPS15-206ENST00000589656 473 ntAPPRIS ALT1 TSL 5 BASIC18.75■□□□□ 0.59
PACS2Q86VP3 CYP2T3P-201ENST00000601990 817 ntBASIC18.75■□□□□ 0.59
PACS2Q86VP3 GDF7-201ENST00000272224 9749 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
PACS2Q86VP3 ZNF18-204ENST00000580306 2330 ntAPPRIS P3 TSL 2 BASIC18.75■□□□□ 0.59
PACS2Q86VP3 GAS7-213ENST00000580865 2417 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
PACS2Q86VP3 DIRC2-201ENST00000261038 3596 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
PACS2Q86VP3 SETD6-201ENST00000219315 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
PACS2Q86VP3 SMUG1-202ENST00000337581 1571 ntAPPRIS P1 TSL 2 BASIC18.75■□□□□ 0.59
PACS2Q86VP3 CAMKK2-206ENST00000402834 2051 ntAPPRIS P4 TSL 1 (best) BASIC18.75■□□□□ 0.59
PACS2Q86VP3 SIPA1-201ENST00000394224 3628 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
PACS2Q86VP3 KLF6-204ENST00000469435 2169 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
PACS2Q86VP3 IQSEC1-201ENST00000273221 5279 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
PACS2Q86VP3 NOMO2-211ENST00000621364 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
PACS2Q86VP3 PSMG4-209ENST00000473000 4603 ntTSL 2 BASIC18.75■□□□□ 0.59
PACS2Q86VP3 ACY1-207ENST00000476854 1319 ntTSL 3 BASIC18.74■□□□□ 0.59
PACS2Q86VP3 ACTL6B-201ENST00000160382 1537 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
PACS2Q86VP3 IDH3G-202ENST00000370092 1712 ntTSL 5 BASIC18.74■□□□□ 0.59
PACS2Q86VP3 ADCK5-201ENST00000308860 1949 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
PACS2Q86VP3 ADAM10-205ENST00000461408 1932 ntTSL 2 BASIC18.74■□□□□ 0.59
PACS2Q86VP3 LRRC42-203ENST00000371370 2037 ntAPPRIS P1 TSL 2 BASIC18.74■□□□□ 0.59
PACS2Q86VP3 PTGIR-201ENST00000291294 2107 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
PACS2Q86VP3 LSM11-201ENST00000286307 6584 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
PACS2Q86VP3 PHF1-202ENST00000374516 2330 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
PACS2Q86VP3 WASF1-205ENST00000392587 2675 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
PACS2Q86VP3 ALDH3B1-204ENST00000614849 2280 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
PACS2Q86VP3 PITPNM2-209ENST00000546049 1793 ntTSL 5 BASIC18.74■□□□□ 0.59
PACS2Q86VP3 HMBOX1-212ENST00000558662 1765 ntTSL 5 BASIC18.74■□□□□ 0.59
PACS2Q86VP3 PCSK7-201ENST00000320934 4649 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
PACS2Q86VP3 IKBIP-203ENST00000393042 1368 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
PACS2Q86VP3 KRT18P68-201ENST00000392293 1000 ntBASIC18.74■□□□□ 0.59
PACS2Q86VP3 EMC6-202ENST00000397133 762 ntAPPRIS P1 TSL 2 BASIC18.74■□□□□ 0.59
PACS2Q86VP3 RAMP1-202ENST00000403885 650 ntTSL 3 BASIC18.74■□□□□ 0.59
PACS2Q86VP3 SERPINH1P1-201ENST00000419794 1249 ntBASIC18.74■□□□□ 0.59
PACS2Q86VP3 PPP1R14BP2-201ENST00000426284 444 ntBASIC18.74■□□□□ 0.59
PACS2Q86VP3 APTR-205ENST00000447009 902 ntTSL 2 BASIC18.74■□□□□ 0.59
PACS2Q86VP3 WWTR1-AS1-203ENST00000495094 975 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
PACS2Q86VP3 CTBP1-AS2-203ENST00000507044 739 ntTSL 3 BASIC18.74■□□□□ 0.59
PACS2Q86VP3 BEAN1-AS1-201ENST00000564618 533 ntTSL 4 BASIC18.74■□□□□ 0.59
PACS2Q86VP3 AL589743.5-201ENST00000616611 1050 ntBASIC18.74■□□□□ 0.59
PACS2Q86VP3 SUPT20H-203ENST00000360252 2843 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.59
PACS2Q86VP3 C8orf34-206ENST00000518698 2223 ntAPPRIS P2 TSL 2 BASIC18.74■□□□□ 0.59
PACS2Q86VP3 FAM69C-201ENST00000343998 3671 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
PACS2Q86VP3 ALAS2-203ENST00000396198 1936 ntTSL 5 BASIC18.74■□□□□ 0.59
PACS2Q86VP3 DBNL-210ENST00000448521 1808 ntAPPRIS ALT1 TSL 1 (best) BASIC18.74■□□□□ 0.59
PACS2Q86VP3 TRIM7-203ENST00000393315 2851 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
PACS2Q86VP3 CIZ1-226ENST00000629610 2855 ntAPPRIS ALT2 TSL 2 BASIC18.74■□□□□ 0.59
PACS2Q86VP3 SLC45A1-202ENST00000471889 2784 ntTSL 5 BASIC18.74■□□□□ 0.59
PACS2Q86VP3 ALOX12-201ENST00000251535 2358 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
PACS2Q86VP3 NPTN-202ENST00000351217 2817 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
PACS2Q86VP3 ZNF211-201ENST00000240731 2440 ntAPPRIS P4 TSL 2 BASIC18.73■□□□□ 0.59
PACS2Q86VP3 PLIN1-201ENST00000300055 2953 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
PACS2Q86VP3 FOXA1-201ENST00000250448 2862 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
PACS2Q86VP3 SATB2-203ENST00000428695 2135 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
PACS2Q86VP3 DUSP1-201ENST00000239223 2019 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
PACS2Q86VP3 PYCR1-216ENST00000619204 1904 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
PACS2Q86VP3 GAR1-201ENST00000226796 1224 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
PACS2Q86VP3 TMEM243-201ENST00000257637 1063 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
PACS2Q86VP3 LINC00471-201ENST00000313064 1282 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
PACS2Q86VP3 UBE2C-203ENST00000352551 665 ntTSL 2 BASIC18.73■□□□□ 0.59
PACS2Q86VP3 APCDD1-201ENST00000355285 3809 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
PACS2Q86VP3 AL355472.2-201ENST00000422958 438 ntBASIC18.73■□□□□ 0.59
PACS2Q86VP3 STAG3L3-201ENST00000423834 1262 ntTSL 2 BASIC18.73■□□□□ 0.59
PACS2Q86VP3 JOSD2-205ENST00000601423 802 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
PACS2Q86VP3 ACYP2-207ENST00000606082 713 ntTSL 5 BASIC18.73■□□□□ 0.59
PACS2Q86VP3 AC074117.1-201ENST00000447070 3060 ntTSL 2 BASIC18.73■□□□□ 0.59
PACS2Q86VP3 MFSD7-204ENST00000503156 1632 ntAPPRIS ALT2 TSL 5 BASIC18.73■□□□□ 0.59
PACS2Q86VP3 RIOX2-201ENST00000333396 5347 ntAPPRIS ALT1 TSL 1 (best) BASIC18.73■□□□□ 0.59
PACS2Q86VP3 CNPPD1-201ENST00000360507 2060 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
PACS2Q86VP3 MOAP1-202ENST00000556883 2529 ntAPPRIS P1 TSL 2 BASIC18.73■□□□□ 0.59
PACS2Q86VP3 MYLK2-202ENST00000375994 2956 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
PACS2Q86VP3 FBXO33-201ENST00000298097 3853 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
PACS2Q86VP3 MEST-202ENST00000341441 2443 ntAPPRIS ALT1 TSL 1 (best) BASIC18.73■□□□□ 0.59
PACS2Q86VP3 PHLDA1-202ENST00000602540 5741 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
PACS2Q86VP3 AC069431.1-201ENST00000488882 1877 ntTSL 5 BASIC18.73■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 22.7 ms