Protein–RNA interactions for Protein: Q86VH4

LRRTM4, Leucine-rich repeat transmembrane neuronal protein 4, humanhuman

Predictions only

Length 590 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRTM4Q86VH4 POLE2-202ENST00000539565 1792 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
LRRTM4Q86VH4 DMWD-201ENST00000270223 3305 ntAPPRIS P2 TSL 1 (best) BASIC18.29■□□□□ 0.52
LRRTM4Q86VH4 PCED1A-201ENST00000356872 1706 ntTSL 2 BASIC18.29■□□□□ 0.52
LRRTM4Q86VH4 CCND3-204ENST00000414200 1724 ntTSL 2 BASIC18.29■□□□□ 0.52
LRRTM4Q86VH4 CXXC5-201ENST00000302517 2658 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
LRRTM4Q86VH4 DISC1-204ENST00000366633 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
LRRTM4Q86VH4 DISC1-214ENST00000539444 2658 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
LRRTM4Q86VH4 MYO9A-214ENST00000566885 5111 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
LRRTM4Q86VH4 MARK2-202ENST00000361128 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
LRRTM4Q86VH4 TULP1-208ENST00000614066 2084 ntAPPRIS ALT2 TSL 5 BASIC18.29■□□□□ 0.52
LRRTM4Q86VH4 RAB7A-201ENST00000265062 2244 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
LRRTM4Q86VH4 MED25-212ENST00000618715 1467 ntTSL 5 BASIC18.29■□□□□ 0.52
LRRTM4Q86VH4 GDPD1-201ENST00000284116 1821 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
LRRTM4Q86VH4 PYDC1-201ENST00000302964 813 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
LRRTM4Q86VH4 GUK1-204ENST00000366721 689 ntTSL 3 BASIC18.29■□□□□ 0.52
LRRTM4Q86VH4 ABCD1-202ENST00000370129 1016 ntTSL 2 BASIC18.29■□□□□ 0.52
LRRTM4Q86VH4 COMTD1-201ENST00000372538 976 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
LRRTM4Q86VH4 STARP1-201ENST00000397973 869 ntBASIC18.29■□□□□ 0.52
LRRTM4Q86VH4 AC114763.1-202ENST00000414911 867 ntTSL 3 BASIC18.29■□□□□ 0.52
LRRTM4Q86VH4 HDAC11-AS1-201ENST00000424112 515 ntTSL 2 BASIC18.29■□□□□ 0.52
LRRTM4Q86VH4 MALL-203ENST00000427178 1070 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
LRRTM4Q86VH4 SAPCD2P2-201ENST00000431719 1174 ntBASIC18.29■□□□□ 0.52
LRRTM4Q86VH4 LINC00599-204ENST00000521242 716 ntTSL 3 BASIC18.29■□□□□ 0.52
LRRTM4Q86VH4 MOK-234ENST00000524370 1165 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
LRRTM4Q86VH4 AC104390.1-201ENST00000555663 520 ntBASIC18.29■□□□□ 0.52
LRRTM4Q86VH4 EBLN3P-205ENST00000629870 958 ntTSL 3 BASIC18.29■□□□□ 0.52
LRRTM4Q86VH4 ARHGAP23-222ENST00000622683 5964 ntAPPRIS P2 TSL 5 BASIC18.29■□□□□ 0.52
LRRTM4Q86VH4 TEKT5-201ENST00000283025 1612 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
LRRTM4Q86VH4 ACADS-201ENST00000242592 1950 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
LRRTM4Q86VH4 TWIST2-202ENST00000612363 1404 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
LRRTM4Q86VH4 BPTF-201ENST00000306378 9688 ntAPPRIS P2 TSL 1 (best) BASIC18.29■□□□□ 0.52
LRRTM4Q86VH4 PRDX3-201ENST00000298510 1591 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
LRRTM4Q86VH4 RNF135-201ENST00000324689 1905 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
LRRTM4Q86VH4 AC008073.3-201ENST00000610442 2281 ntAPPRIS P1 TSL 2 BASIC18.29■□□□□ 0.52
LRRTM4Q86VH4 ITPKB-202ENST00000366784 3146 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
LRRTM4Q86VH4 SPAG1-206ENST00000520643 1723 ntTSL 2 BASIC18.29■□□□□ 0.52
LRRTM4Q86VH4 P2RX2-208ENST00000542301 1881 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
LRRTM4Q86VH4 CLIP2-202ENST00000361545 5445 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
LRRTM4Q86VH4 BRPF3-202ENST00000357641 6052 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
LRRTM4Q86VH4 MOXD1-203ENST00000392401 2191 ntTSL 4 BASIC18.28■□□□□ 0.52
LRRTM4Q86VH4 SLC12A4-202ENST00000422611 4670 ntTSL 2 BASIC18.28■□□□□ 0.52
LRRTM4Q86VH4 PCDH1-201ENST00000287008 4793 ntAPPRIS P3 TSL 5 BASIC18.28■□□□□ 0.52
LRRTM4Q86VH4 DISP3-202ENST00000304391 1495 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
LRRTM4Q86VH4 NAT16-201ENST00000300303 2935 ntAPPRIS P2 TSL 2 BASIC18.28■□□□□ 0.52
LRRTM4Q86VH4 ARMC10P1-201ENST00000313754 855 ntBASIC18.28■□□□□ 0.52
LRRTM4Q86VH4 COPE-203ENST00000351079 907 ntTSL 2 BASIC18.28■□□□□ 0.52
LRRTM4Q86VH4 CD1E-211ENST00000368166 1271 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
LRRTM4Q86VH4 AC003075.1-204ENST00000433005 540 ntTSL 2 BASIC18.28■□□□□ 0.52
LRRTM4Q86VH4 AL513320.1-201ENST00000435049 622 ntTSL 3 BASIC18.28■□□□□ 0.52
LRRTM4Q86VH4 SNX5-210ENST00000481323 562 ntTSL 3 BASIC18.28■□□□□ 0.52
LRRTM4Q86VH4 C7orf49-209ENST00000483029 596 ntTSL 2 BASIC18.28■□□□□ 0.52
LRRTM4Q86VH4 C16orf74-207ENST00000602914 761 ntAPPRIS ALT2 TSL 2 BASIC18.28■□□□□ 0.52
LRRTM4Q86VH4 TLE3-226ENST00000627388 5742 ntAPPRIS ALT1 TSL 5 BASIC18.28■□□□□ 0.52
LRRTM4Q86VH4 ZNRF3-203ENST00000544604 6851 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
LRRTM4Q86VH4 BCL7A-203ENST00000538010 6247 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
LRRTM4Q86VH4 NGLY1-202ENST00000280700 2473 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
LRRTM4Q86VH4 CAPN12-201ENST00000328867 2762 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
LRRTM4Q86VH4 EFEMP2-210ENST00000528176 1504 ntTSL 5 BASIC18.28■□□□□ 0.52
LRRTM4Q86VH4 LYPD3-201ENST00000244333 1694 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
LRRTM4Q86VH4 TYMS-203ENST00000323274 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
LRRTM4Q86VH4 CYP2A7-201ENST00000291764 2128 ntTSL 5 BASIC18.28■□□□□ 0.52
LRRTM4Q86VH4 LPCAT3-201ENST00000261407 2268 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
LRRTM4Q86VH4 PRSS36-202ENST00000418068 2446 ntTSL 2 BASIC18.28■□□□□ 0.52
LRRTM4Q86VH4 SNAI3-AS1-205ENST00000568633 2096 ntBASIC18.27■□□□□ 0.52
LRRTM4Q86VH4 CTBP2-214ENST00000531469 1918 ntAPPRIS P1 TSL 2 BASIC18.27■□□□□ 0.52
LRRTM4Q86VH4 PTN-201ENST00000348225 1614 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
LRRTM4Q86VH4 BTG3-201ENST00000339775 1485 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
LRRTM4Q86VH4 SPAG4-201ENST00000374273 1453 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
LRRTM4Q86VH4 MARK2-208ENST00000508192 2924 ntAPPRIS P3 TSL 5 BASIC18.27■□□□□ 0.52
LRRTM4Q86VH4 GAS6-201ENST00000327773 2490 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
LRRTM4Q86VH4 VPS26B-202ENST00000525095 1558 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.52
LRRTM4Q86VH4 FAM19A3-201ENST00000361886 1056 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
LRRTM4Q86VH4 KRT18P38-201ENST00000449496 1282 ntBASIC18.27■□□□□ 0.52
LRRTM4Q86VH4 AP003396.1-201ENST00000501918 507 ntTSL 5 BASIC18.27■□□□□ 0.52
LRRTM4Q86VH4 ZNF706-206ENST00000519744 785 ntTSL 3 BASIC18.27■□□□□ 0.52
LRRTM4Q86VH4 AC087388.1-201ENST00000571370 1112 ntBASIC18.27■□□□□ 0.52
LRRTM4Q86VH4 COLCA2-205ENST00000614153 1264 ntTSL 3 BASIC18.27■□□□□ 0.52
LRRTM4Q86VH4 AC243829.1-201ENST00000615128 1059 ntTSL 2 BASIC18.27■□□□□ 0.52
LRRTM4Q86VH4 BMP1-202ENST00000306385 4229 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
LRRTM4Q86VH4 CYP2D7-201ENST00000358097 1655 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
LRRTM4Q86VH4 TICAM1-202ENST00000621756 1650 ntTSL 5 BASIC18.27■□□□□ 0.52
LRRTM4Q86VH4 DMRT2-201ENST00000259622 2459 ntTSL 2 BASIC18.27■□□□□ 0.51
LRRTM4Q86VH4 COBL-210ENST00000632460 1941 ntTSL 5 BASIC18.27■□□□□ 0.51
LRRTM4Q86VH4 PIANP-201ENST00000320591 2323 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.51
LRRTM4Q86VH4 SEMA3B-202ENST00000418576 1765 ntTSL 2 BASIC18.27■□□□□ 0.51
LRRTM4Q86VH4 PHLDA1-202ENST00000602540 5741 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.51
LRRTM4Q86VH4 FAM91A1-207ENST00000521166 2706 ntTSL 2 BASIC18.27■□□□□ 0.51
LRRTM4Q86VH4 PDP1-208ENST00000520728 2554 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.51
LRRTM4Q86VH4 KCNQ5-203ENST00000355635 6623 ntAPPRIS ALT1 TSL 5 BASIC18.27■□□□□ 0.51
LRRTM4Q86VH4 YY1AP1-213ENST00000405763 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.51
LRRTM4Q86VH4 EDNRA-206ENST00000511804 1569 ntTSL 2 BASIC18.26■□□□□ 0.51
LRRTM4Q86VH4 ARSA-203ENST00000395619 1824 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
LRRTM4Q86VH4 NOM1-201ENST00000275820 6077 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
LRRTM4Q86VH4 JPH2-201ENST00000342272 1923 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
LRRTM4Q86VH4 ZMYM5-203ENST00000382907 1092 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
LRRTM4Q86VH4 SPDYE15P-201ENST00000424157 909 ntBASIC18.26■□□□□ 0.51
LRRTM4Q86VH4 RASA4DP-201ENST00000460726 1199 ntBASIC18.26■□□□□ 0.51
LRRTM4Q86VH4 KRT18P41-201ENST00000518924 1277 ntBASIC18.26■□□□□ 0.51
LRRTM4Q86VH4 MFGE8-203ENST00000542878 1172 ntTSL 2 BASIC18.26■□□□□ 0.51
LRRTM4Q86VH4 PRTN3-202ENST00000544537 1036 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 41.1 ms