Protein–RNA interactions for Protein: Q6ZUS6

CCDC149, Coiled-coil domain-containing protein 149, humanhuman

Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC149Q6ZUS6 CORO1B-201ENST00000341356 1881 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
CCDC149Q6ZUS6 ARHGEF4-202ENST00000355771 1872 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.72
CCDC149Q6ZUS6 AC006333.2-201ENST00000607957 2099 ntBASIC19.58■□□□□ 0.72
CCDC149Q6ZUS6 ERLEC1-202ENST00000378239 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.72
CCDC149Q6ZUS6 ASL-205ENST00000395332 1622 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
CCDC149Q6ZUS6 MEN1-206ENST00000377321 2614 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
CCDC149Q6ZUS6 NDUFA10-203ENST00000404554 1557 ntTSL 5 BASIC19.57■□□□□ 0.72
CCDC149Q6ZUS6 AC020661.1-201ENST00000503052 1584 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
CCDC149Q6ZUS6 PRKG2-207ENST00000628926 2623 ntTSL 2 BASIC19.57■□□□□ 0.72
CCDC149Q6ZUS6 FBXO31-201ENST00000311635 5934 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
CCDC149Q6ZUS6 LINC00960-201ENST00000463183 1333 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
CCDC149Q6ZUS6 SETMAR-206ENST00000430981 1671 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
CCDC149Q6ZUS6 ZNF414-201ENST00000255616 1178 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
CCDC149Q6ZUS6 ITM2C-204ENST00000409704 1106 ntTSL 5 BASIC19.57■□□□□ 0.72
CCDC149Q6ZUS6 MRPL28-203ENST00000429738 310 ntTSL 2 BASIC19.57■□□□□ 0.72
CCDC149Q6ZUS6 LINC01770-202ENST00000430109 510 ntTSL 3 BASIC19.57■□□□□ 0.72
CCDC149Q6ZUS6 AP003733.1-201ENST00000491725 852 ntBASIC19.57■□□□□ 0.72
CCDC149Q6ZUS6 VEGFA-222ENST00000520948 1199 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
CCDC149Q6ZUS6 RNF126P1-202ENST00000569893 925 ntBASIC19.57■□□□□ 0.72
CCDC149Q6ZUS6 MIR2117HG-201ENST00000588060 506 ntTSL 4 BASIC19.57■□□□□ 0.72
CCDC149Q6ZUS6 SYNGR4-204ENST00000601610 859 ntTSL 3 BASIC19.57■□□□□ 0.72
CCDC149Q6ZUS6 AC104692.2-201ENST00000603054 253 ntBASIC19.57■□□□□ 0.72
CCDC149Q6ZUS6 METTL23-215ENST00000615984 1171 ntAPPRIS P1 TSL 2 BASIC19.57■□□□□ 0.72
CCDC149Q6ZUS6 AC023511.2-201ENST00000618803 211 ntBASIC19.57■□□□□ 0.72
CCDC149Q6ZUS6 CD24-206ENST00000620405 586 ntAPPRIS ALT2 TSL 2 BASIC19.57■□□□□ 0.72
CCDC149Q6ZUS6 CLK3-202ENST00000395066 2621 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
CCDC149Q6ZUS6 IQCJ-SCHIP1-204ENST00000485419 2445 ntAPPRIS ALT2 TSL 2 BASIC19.57■□□□□ 0.72
CCDC149Q6ZUS6 P2RY6-203ENST00000393591 1829 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
CCDC149Q6ZUS6 FAM3A-215ENST00000447601 1800 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
CCDC149Q6ZUS6 SPSB3-201ENST00000301717 1449 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
CCDC149Q6ZUS6 ZNF771-201ENST00000319296 2371 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
CCDC149Q6ZUS6 RETREG2-203ENST00000430297 4618 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
CCDC149Q6ZUS6 THOC3-208ENST00000513482 1796 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
CCDC149Q6ZUS6 ITGB7-209ENST00000550743 2138 ntTSL 5 BASIC19.57■□□□□ 0.72
CCDC149Q6ZUS6 UPP1-201ENST00000331803 1932 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
CCDC149Q6ZUS6 BLACE-201ENST00000378120 2456 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
CCDC149Q6ZUS6 DUT-202ENST00000455976 1935 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
CCDC149Q6ZUS6 CYP2E1-205ENST00000463117 1912 ntAPPRIS P1 TSL 5 BASIC19.57■□□□□ 0.72
CCDC149Q6ZUS6 E4F1-204ENST00000564139 2493 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
CCDC149Q6ZUS6 FADS2-209ENST00000521849 1703 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
CCDC149Q6ZUS6 YIPF2-201ENST00000253031 2087 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
CCDC149Q6ZUS6 PCBP4-212ENST00000484633 2009 ntTSL 5 BASIC19.56■□□□□ 0.72
CCDC149Q6ZUS6 FAM72B-202ENST00000369390 2396 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
CCDC149Q6ZUS6 PTPMT1-201ENST00000326656 928 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
CCDC149Q6ZUS6 GSTO2-201ENST00000338595 1179 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
CCDC149Q6ZUS6 TBPL1-203ENST00000367871 808 ntTSL 2 BASIC19.56■□□□□ 0.72
CCDC149Q6ZUS6 INTS11-208ENST00000435064 2148 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
CCDC149Q6ZUS6 AC079781.3-201ENST00000449110 356 ntBASIC19.56■□□□□ 0.72
CCDC149Q6ZUS6 NTMT1-205ENST00000459968 1123 ntTSL 2 BASIC19.56■□□□□ 0.72
CCDC149Q6ZUS6 NTMT1-207ENST00000482347 1072 ntTSL 2 BASIC19.56■□□□□ 0.72
CCDC149Q6ZUS6 KRT18P31-201ENST00000506277 1292 ntBASIC19.56■□□□□ 0.72
CCDC149Q6ZUS6 BRICD5-203ENST00000566018 555 ntTSL 2 BASIC19.56■□□□□ 0.72
CCDC149Q6ZUS6 RPL19-204ENST00000579260 1051 ntAPPRIS ALT1 TSL 2 BASIC19.56■□□□□ 0.72
CCDC149Q6ZUS6 C1orf43-210ENST00000640799 1287 ntTSL 5 BASIC19.56■□□□□ 0.72
CCDC149Q6ZUS6 CTNNBL1-201ENST00000361383 1925 ntAPPRIS P2 TSL 1 (best) BASIC19.56■□□□□ 0.72
CCDC149Q6ZUS6 RTN4RL2-201ENST00000335099 2203 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
CCDC149Q6ZUS6 GLT1D1-204ENST00000442111 2995 ntAPPRIS P1 TSL 5 BASIC19.56■□□□□ 0.72
CCDC149Q6ZUS6 EXOSC3-201ENST00000327304 1806 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
CCDC149Q6ZUS6 WFDC1-203ENST00000568638 1319 ntAPPRIS P1 TSL 2 BASIC19.55■□□□□ 0.72
CCDC149Q6ZUS6 SREBF2-209ENST00000612482 5365 ntTSL 5 BASIC19.55■□□□□ 0.72
CCDC149Q6ZUS6 PBK-203ENST00000522944 1499 ntTSL 2 BASIC19.55■□□□□ 0.72
CCDC149Q6ZUS6 Z83836.1-201ENST00000624605 1642 ntBASIC19.55■□□□□ 0.72
CCDC149Q6ZUS6 TM9SF1-203ENST00000524835 1938 ntTSL 2 BASIC19.55■□□□□ 0.72
CCDC149Q6ZUS6 GPR31-201ENST00000366834 2059 ntAPPRIS P1 BASIC19.55■□□□□ 0.72
CCDC149Q6ZUS6 TMEM42-201ENST00000302392 1026 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
CCDC149Q6ZUS6 YBEY-201ENST00000329319 1019 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
CCDC149Q6ZUS6 GNA14-201ENST00000341700 2482 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
CCDC149Q6ZUS6 CKLF-202ENST00000345436 571 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
CCDC149Q6ZUS6 PHPT1-202ENST00000371661 985 ntTSL 5 BASIC19.55■□□□□ 0.72
CCDC149Q6ZUS6 FAM214B-203ENST00000378561 5771 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
CCDC149Q6ZUS6 FAM239B-201ENST00000381106 1099 ntTSL 2 BASIC19.55■□□□□ 0.72
CCDC149Q6ZUS6 YBEY-206ENST00000397701 744 ntAPPRIS P1 TSL 2 BASIC19.55■□□□□ 0.72
CCDC149Q6ZUS6 C19orf25-201ENST00000427685 1410 ntTSL 2 BASIC19.55■□□□□ 0.72
CCDC149Q6ZUS6 AP001625.2-201ENST00000442605 575 ntTSL 2 BASIC19.55■□□□□ 0.72
CCDC149Q6ZUS6 LINC02028-204ENST00000449350 1419 ntTSL 3 BASIC19.55■□□□□ 0.72
CCDC149Q6ZUS6 AC104819.1-201ENST00000504587 486 ntBASIC19.55■□□□□ 0.72
CCDC149Q6ZUS6 AC026471.3-201ENST00000565137 578 ntTSL 2 BASIC19.55■□□□□ 0.72
CCDC149Q6ZUS6 LAT-211ENST00000566177 786 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
CCDC149Q6ZUS6 PPP1R1B-208ENST00000580825 1038 ntAPPRIS P1 TSL 5 BASIC19.55■□□□□ 0.72
CCDC149Q6ZUS6 AC090616.6-201ENST00000582640 721 ntBASIC19.55■□□□□ 0.72
CCDC149Q6ZUS6 SRSF1-209ENST00000585096 568 ntTSL 4 BASIC19.55■□□□□ 0.72
CCDC149Q6ZUS6 DEF8-228ENST00000610455 816 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
CCDC149Q6ZUS6 CYP27A1-201ENST00000258415 2286 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
CCDC149Q6ZUS6 FOXD4-201ENST00000382500 1974 ntAPPRIS P1 BASIC19.55■□□□□ 0.72
CCDC149Q6ZUS6 SIX5-203ENST00000560168 1975 ntTSL 4 BASIC19.55■□□□□ 0.72
CCDC149Q6ZUS6 AC012615.6-201ENST00000593201 1697 ntTSL 2 BASIC19.55■□□□□ 0.72
CCDC149Q6ZUS6 WNT10A-201ENST00000258411 2547 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
CCDC149Q6ZUS6 FBLN1-204ENST00000402984 2355 ntTSL 5 BASIC19.55■□□□□ 0.72
CCDC149Q6ZUS6 SIGIRR-220ENST00000531205 1649 ntTSL 2 BASIC19.54■□□□□ 0.72
CCDC149Q6ZUS6 VPS37D-202ENST00000451519 1303 ntTSL 5 BASIC19.54■□□□□ 0.72
CCDC149Q6ZUS6 NEK2-205ENST00000540251 1318 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
CCDC149Q6ZUS6 RASSF1-202ENST00000357043 1864 ntAPPRIS P3 TSL 1 (best) BASIC19.54■□□□□ 0.72
CCDC149Q6ZUS6 NECTIN3-211ENST00000493615 1876 ntAPPRIS ALT2 TSL 2 BASIC19.54■□□□□ 0.72
CCDC149Q6ZUS6 LRRC4B-201ENST00000389201 2958 ntAPPRIS P1 TSL 2 BASIC19.54■□□□□ 0.72
CCDC149Q6ZUS6 MARC2-202ENST00000366913 2134 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
CCDC149Q6ZUS6 WDR45-205ENST00000376358 1432 ntTSL 2 BASIC19.54■□□□□ 0.72
CCDC149Q6ZUS6 IRX4-208ENST00000622814 2398 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
CCDC149Q6ZUS6 PSCA-201ENST00000301258 1020 ntAPPRIS P2 TSL 1 (best) BASIC19.54■□□□□ 0.72
CCDC149Q6ZUS6 RPL36-202ENST00000394580 556 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
CCDC149Q6ZUS6 PTX4-202ENST00000440447 1117 ntTSL 5 BASIC19.54■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 21.8 ms