Protein–RNA interactions for Protein: Q6UWJ1

TMCO3, Transmembrane and coiled-coil domain-containing protein 3, humanhuman

Predictions only

Length 677 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMCO3Q6UWJ1 SIRPAP1-201ENST00000448467 1770 ntBASIC20.21■□□□□ 0.83
TMCO3Q6UWJ1 PTGDR-201ENST00000306051 2942 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
TMCO3Q6UWJ1 HGFAC-201ENST00000382774 2159 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
TMCO3Q6UWJ1 MPV17L2-204ENST00000599612 1408 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
TMCO3Q6UWJ1 KDSR-202ENST00000406396 5447 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
TMCO3Q6UWJ1 WIPF1-206ENST00000409891 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
TMCO3Q6UWJ1 EML2-203ENST00000536630 2791 ntAPPRIS ALT2 TSL 2 BASIC20.21■□□□□ 0.83
TMCO3Q6UWJ1 CDK16-223ENST00000622098 2968 ntTSL 2 BASIC20.21■□□□□ 0.83
TMCO3Q6UWJ1 FER1L4-211ENST00000616283 1818 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
TMCO3Q6UWJ1 PRSS35-201ENST00000369700 2440 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
TMCO3Q6UWJ1 WDR74-202ENST00000311713 1153 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
TMCO3Q6UWJ1 RGCC-201ENST00000379359 960 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
TMCO3Q6UWJ1 ESRRAP1-201ENST00000400596 1257 ntBASIC20.21■□□□□ 0.83
TMCO3Q6UWJ1 LINC02531-201ENST00000404689 593 ntTSL 5 BASIC20.21■□□□□ 0.83
TMCO3Q6UWJ1 AC079145.1-201ENST00000416575 541 ntTSL 2 BASIC20.21■□□□□ 0.83
TMCO3Q6UWJ1 KRT17P3-201ENST00000420566 1262 ntBASIC20.21■□□□□ 0.83
TMCO3Q6UWJ1 CENPS-CORT-202ENST00000465026 494 ntTSL 3 BASIC20.21■□□□□ 0.83
TMCO3Q6UWJ1 CENPS-CORT-203ENST00000470413 626 ntTSL 2 BASIC20.21■□□□□ 0.83
TMCO3Q6UWJ1 LCN6-203ENST00000476567 1015 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
TMCO3Q6UWJ1 DENND3-207ENST00000518347 850 ntTSL 2 BASIC20.21■□□□□ 0.83
TMCO3Q6UWJ1 MMAB-206ENST00000540016 945 ntTSL 3 BASIC20.21■□□□□ 0.83
TMCO3Q6UWJ1 CELF6-205ENST00000567083 1496 ntAPPRIS ALT2 TSL 2 BASIC20.21■□□□□ 0.83
TMCO3Q6UWJ1 CHTOP-204ENST00000368694 2096 ntAPPRIS P3 TSL 1 (best) BASIC20.21■□□□□ 0.83
TMCO3Q6UWJ1 NR2F1-201ENST00000327111 3732 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
TMCO3Q6UWJ1 NTMT1-210ENST00000613644 1501 ntAPPRIS P1 TSL 3 BASIC20.21■□□□□ 0.83
TMCO3Q6UWJ1 PRR7-202ENST00000502922 1345 ntAPPRIS P1 TSL 2 BASIC20.21■□□□□ 0.83
TMCO3Q6UWJ1 ARRB2-216ENST00000574954 1348 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
TMCO3Q6UWJ1 INPP4A-205ENST00000409851 3365 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
TMCO3Q6UWJ1 ARHGEF28-212ENST00000513042 6273 ntAPPRIS ALT2 TSL 5 BASIC20.21■□□□□ 0.83
TMCO3Q6UWJ1 ARHGAP22-203ENST00000374172 2380 ntTSL 2 BASIC20.21■□□□□ 0.83
TMCO3Q6UWJ1 PHKA1-201ENST00000339490 6121 ntAPPRIS ALT1 TSL 1 (best) BASIC20.21■□□□□ 0.83
TMCO3Q6UWJ1 ITGB4-201ENST00000200181 5919 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
TMCO3Q6UWJ1 SLC25A15-201ENST00000338625 1586 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
TMCO3Q6UWJ1 HR-201ENST00000312841 5351 ntTSL 5 BASIC20.21■□□□□ 0.83
TMCO3Q6UWJ1 TNRC18P3-201ENST00000441896 2691 ntBASIC20.2■□□□□ 0.82
TMCO3Q6UWJ1 MAP3K11-210ENST00000532507 1812 ntTSL 2 BASIC20.2■□□□□ 0.82
TMCO3Q6UWJ1 EMILIN3-201ENST00000332312 3796 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
TMCO3Q6UWJ1 CAMK2B-204ENST00000350811 2292 ntAPPRIS P4 TSL 2 BASIC20.2■□□□□ 0.82
TMCO3Q6UWJ1 PHF20L1-209ENST00000395386 6237 ntAPPRIS P1 TSL 5 BASIC20.2■□□□□ 0.82
TMCO3Q6UWJ1 KMT2E-207ENST00000476671 2523 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
TMCO3Q6UWJ1 TEFM-205ENST00000581216 1891 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
TMCO3Q6UWJ1 ISLR2-202ENST00000419208 2306 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
TMCO3Q6UWJ1 LINC00896-202ENST00000609602 2128 ntBASIC20.2■□□□□ 0.82
TMCO3Q6UWJ1 KLC2-203ENST00000394066 2591 ntTSL 2 BASIC20.2■□□□□ 0.82
TMCO3Q6UWJ1 MEPCE-201ENST00000310512 3030 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
TMCO3Q6UWJ1 AC133785.1-201ENST00000429282 2824 ntTSL 2 BASIC20.2■□□□□ 0.82
TMCO3Q6UWJ1 NSFL1C-206ENST00000476071 2800 ntTSL 5 BASIC20.2■□□□□ 0.82
TMCO3Q6UWJ1 SARDH-201ENST00000298628 1484 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
TMCO3Q6UWJ1 RASSF5-205ENST00000581503 5586 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
TMCO3Q6UWJ1 DMRT3-201ENST00000190165 2183 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
TMCO3Q6UWJ1 DHX33-201ENST00000225296 5618 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
TMCO3Q6UWJ1 CLIC6-201ENST00000349499 3806 ntAPPRIS P3 TSL 1 (best) BASIC20.2■□□□□ 0.82
TMCO3Q6UWJ1 TREX2-204ENST00000370212 861 ntTSL 5 BASIC20.2■□□□□ 0.82
TMCO3Q6UWJ1 TREX2-205ENST00000370231 1255 ntAPPRIS P1 TSL 5 BASIC20.2■□□□□ 0.82
TMCO3Q6UWJ1 ZDHHC12-202ENST00000372667 1187 ntTSL 5 BASIC20.2■□□□□ 0.82
TMCO3Q6UWJ1 TREX2-207ENST00000393862 907 ntAPPRIS P1 TSL 2 BASIC20.2■□□□□ 0.82
TMCO3Q6UWJ1 LIME1-205ENST00000480139 819 ntAPPRIS ALT2 TSL 3 BASIC20.2■□□□□ 0.82
TMCO3Q6UWJ1 LEF1-AS1-203ENST00000507799 459 ntTSL 3 BASIC20.2■□□□□ 0.82
TMCO3Q6UWJ1 AC026427.1-201ENST00000508993 555 ntTSL 3 BASIC20.2■□□□□ 0.82
TMCO3Q6UWJ1 AC068987.1-201ENST00000562996 427 ntTSL 3 BASIC20.2■□□□□ 0.82
TMCO3Q6UWJ1 AC007786.1-201ENST00000587859 709 ntTSL 2 BASIC20.2■□□□□ 0.82
TMCO3Q6UWJ1 DEDD2-205ENST00000596251 1183 ntAPPRIS P3 TSL 1 (best) BASIC20.2■□□□□ 0.82
TMCO3Q6UWJ1 ANKRD13D-201ENST00000308440 2219 ntTSL 2 BASIC20.2■□□□□ 0.82
TMCO3Q6UWJ1 EEF1D-205ENST00000442189 2207 ntAPPRIS P4 TSL 1 (best) BASIC20.2■□□□□ 0.82
TMCO3Q6UWJ1 MAP3K6-201ENST00000357582 4136 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
TMCO3Q6UWJ1 IQSEC2-202ENST00000396435 6015 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
TMCO3Q6UWJ1 SSUH2-202ENST00000341795 1799 ntAPPRIS P3 TSL 1 (best) BASIC20.2■□□□□ 0.82
TMCO3Q6UWJ1 HIGD1A-201ENST00000321331 1373 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
TMCO3Q6UWJ1 KLHL22-201ENST00000328879 2616 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
TMCO3Q6UWJ1 AC124067.4-201ENST00000519691 2379 ntBASIC20.2■□□□□ 0.82
TMCO3Q6UWJ1 SH2B1-216ENST00000618521 2935 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
TMCO3Q6UWJ1 ANXA2-201ENST00000332680 1444 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
TMCO3Q6UWJ1 KANSL2-212ENST00000550347 2714 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
TMCO3Q6UWJ1 SERPINA4-202ENST00000555095 1987 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
TMCO3Q6UWJ1 ARFIP2-201ENST00000254584 2543 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
TMCO3Q6UWJ1 HEMK1-206ENST00000455834 1499 ntAPPRIS P1 TSL 5 BASIC20.19■□□□□ 0.82
TMCO3Q6UWJ1 AC010173.1-201ENST00000549023 1453 ntTSL 2 BASIC20.19■□□□□ 0.82
TMCO3Q6UWJ1 C19orf25-206ENST00000588849 1472 ntTSL 5 BASIC20.19■□□□□ 0.82
TMCO3Q6UWJ1 IL17RC-201ENST00000295981 2621 ntAPPRIS P4 TSL 2 BASIC20.19■□□□□ 0.82
TMCO3Q6UWJ1 ATP1B1-202ENST00000367816 2608 ntAPPRIS P1 TSL 5 BASIC20.19■□□□□ 0.82
TMCO3Q6UWJ1 BFSP1-205ENST00000536626 2075 ntTSL 2 BASIC20.19■□□□□ 0.82
TMCO3Q6UWJ1 MAP4K4-205ENST00000350878 7640 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
TMCO3Q6UWJ1 IFFO1-201ENST00000336604 2686 ntAPPRIS P3 TSL 1 (best) BASIC20.19■□□□□ 0.82
TMCO3Q6UWJ1 ADAMTS16-203ENST00000511368 2682 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
TMCO3Q6UWJ1 BAZ1A-203ENST00000382422 5775 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
TMCO3Q6UWJ1 RIMS4-201ENST00000372851 5203 ntAPPRIS P3 TSL 1 (best) BASIC20.19■□□□□ 0.82
TMCO3Q6UWJ1 MRPS24-201ENST00000317534 707 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
TMCO3Q6UWJ1 MCHR1-202ENST00000381433 1219 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
TMCO3Q6UWJ1 ZNF529-AS1-202ENST00000475219 1033 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
TMCO3Q6UWJ1 FAM32A-205ENST00000589852 1168 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
TMCO3Q6UWJ1 GTF2IRD2B-206ENST00000614064 573 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
TMCO3Q6UWJ1 TAF4B-201ENST00000269142 5260 ntAPPRIS P3 TSL 1 (best) BASIC20.19■□□□□ 0.82
TMCO3Q6UWJ1 CALHM2-201ENST00000260743 1859 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
TMCO3Q6UWJ1 ARRB1-201ENST00000360025 1895 ntAPPRIS P3 TSL 1 (best) BASIC20.19■□□□□ 0.82
TMCO3Q6UWJ1 P2RX2-206ENST00000389110 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
TMCO3Q6UWJ1 P2RX2-208ENST00000542301 1881 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
TMCO3Q6UWJ1 GATAD2A-202ENST00000360315 5671 ntAPPRIS P3 TSL 5 BASIC20.19■□□□□ 0.82
TMCO3Q6UWJ1 PLK1-201ENST00000300093 2227 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
TMCO3Q6UWJ1 C3orf58-201ENST00000315691 4346 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
TMCO3Q6UWJ1 SWAP70-202ENST00000447399 3538 ntTSL 2 BASIC20.19■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 31 ms