Protein–RNA interactions for Protein: Q6PI97

C11orf88, UPF0722 protein C11orf88, humanhuman

Predictions only

Length 169 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf88Q6PI97 TSPAN17-201ENST00000298564 2810 ntTSL 2 BASIC16.24■□□□□ 0.19
C11orf88Q6PI97 RRNAD1-202ENST00000368218 1802 ntAPPRIS ALT2 TSL 3 BASIC16.24■□□□□ 0.19
C11orf88Q6PI97 PCDH19-202ENST00000373034 9756 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
C11orf88Q6PI97 NXN-202ENST00000537628 1340 ntTSL 3 BASIC16.24■□□□□ 0.19
C11orf88Q6PI97 USP45-201ENST00000327681 6255 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
C11orf88Q6PI97 EMC8-201ENST00000253457 1962 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
C11orf88Q6PI97 ACBD4-202ENST00000376955 1453 ntTSL 2 BASIC16.24■□□□□ 0.19
C11orf88Q6PI97 IRF3-221ENST00000598808 1468 ntTSL 5 BASIC16.24■□□□□ 0.19
C11orf88Q6PI97 C15orf56-202ENST00000623360 2129 ntTSL 2 BASIC16.24■□□□□ 0.19
C11orf88Q6PI97 PIP5K1C-205ENST00000589578 2933 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
C11orf88Q6PI97 SPRYD7-204ENST00000613924 2285 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
C11orf88Q6PI97 HPS3-202ENST00000460120 2745 ntTSL 2 BASIC16.24■□□□□ 0.19
C11orf88Q6PI97 TXNL4A-201ENST00000269601 3504 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
C11orf88Q6PI97 FAM210A-201ENST00000322247 4340 ntAPPRIS P1 TSL 2 BASIC16.24■□□□□ 0.19
C11orf88Q6PI97 ME2-201ENST00000321341 9415 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
C11orf88Q6PI97 LGALS7B-201ENST00000314980 483 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
C11orf88Q6PI97 HCFC1R1-202ENST00000354679 765 ntTSL 2 BASIC16.24■□□□□ 0.19
C11orf88Q6PI97 DNTTIP1-201ENST00000372622 1290 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
C11orf88Q6PI97 DGCR6L-202ENST00000405465 962 ntTSL 3 BASIC16.24■□□□□ 0.19
C11orf88Q6PI97 AC007285.1-201ENST00000422239 893 ntTSL 5 BASIC16.24■□□□□ 0.19
C11orf88Q6PI97 OR2A1-AS1-201ENST00000462305 773 ntBASIC16.24■□□□□ 0.19
C11orf88Q6PI97 AC004889.1-204ENST00000474656 773 ntTSL 3 BASIC16.24■□□□□ 0.19
C11orf88Q6PI97 AP003097.1-201ENST00000530657 1135 ntBASIC16.24■□□□□ 0.19
C11orf88Q6PI97 OTOP3-201ENST00000328801 2363 ntAPPRIS P1 TSL 2 BASIC16.24■□□□□ 0.19
C11orf88Q6PI97 CDKN1B-201ENST00000228872 2657 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
C11orf88Q6PI97 RIMS1-210ENST00000491071 5047 ntTSL 5 BASIC16.24■□□□□ 0.19
C11orf88Q6PI97 CARNS1-201ENST00000307823 3942 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
C11orf88Q6PI97 ABCC6-209ENST00000640696 1893 ntTSL 5 BASIC16.24■□□□□ 0.19
C11orf88Q6PI97 HEXB-207ENST00000511181 2021 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
C11orf88Q6PI97 CCT7-215ENST00000539919 2031 ntTSL 2 BASIC16.24■□□□□ 0.19
C11orf88Q6PI97 QPRT-202ENST00000395384 2343 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
C11orf88Q6PI97 BNC1-201ENST00000345382 4610 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
C11orf88Q6PI97 AL031282.2-201ENST00000598846 5079 ntTSL 2 BASIC16.24■□□□□ 0.19
C11orf88Q6PI97 PARD3-201ENST00000340077 3518 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
C11orf88Q6PI97 TSTA3-201ENST00000425753 1362 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
C11orf88Q6PI97 CD7-206ENST00000583376 1659 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
C11orf88Q6PI97 GDPD1-201ENST00000284116 1821 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
C11orf88Q6PI97 TDRD6-201ENST00000316081 6817 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
C11orf88Q6PI97 ADPGK-AS1-201ENST00000563592 2730 ntTSL 2 BASIC16.24■□□□□ 0.19
C11orf88Q6PI97 MAP6-202ENST00000434603 4329 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
C11orf88Q6PI97 MIB2-201ENST00000355826 3290 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
C11orf88Q6PI97 HYAL1-204ENST00000395144 2081 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
C11orf88Q6PI97 SLC25A3-201ENST00000188376 1909 ntAPPRIS ALT1 TSL 1 (best) BASIC16.23■□□□□ 0.19
C11orf88Q6PI97 AC067852.2-201ENST00000590513 2313 ntBASIC16.23■□□□□ 0.19
C11orf88Q6PI97 PARVG-205ENST00000422871 3462 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
C11orf88Q6PI97 PPP1R3E-201ENST00000452015 4773 ntAPPRIS P1 TSL 2 BASIC16.23■□□□□ 0.19
C11orf88Q6PI97 CCM2-202ENST00000381112 1881 ntAPPRIS ALT2 TSL 2 BASIC16.23■□□□□ 0.19
C11orf88Q6PI97 FDXR-203ENST00000420580 1705 ntTSL 2 BASIC16.23■□□□□ 0.19
C11orf88Q6PI97 PHRF1-201ENST00000264555 5523 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
C11orf88Q6PI97 ETHE1-201ENST00000292147 963 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
C11orf88Q6PI97 PRORSD1P-201ENST00000295112 541 ntBASIC16.23■□□□□ 0.19
C11orf88Q6PI97 CD99-203ENST00000381184 918 ntAPPRIS ALT2 TSL 5 BASIC16.23■□□□□ 0.19
C11orf88Q6PI97 SLC47A1P1-201ENST00000420951 500 ntTSL 5 BASIC16.23■□□□□ 0.19
C11orf88Q6PI97 GCC2-AS1-202ENST00000440975 574 ntTSL 4 BASIC16.23■□□□□ 0.19
C11orf88Q6PI97 NCBP2-207ENST00000452404 1133 ntTSL 2 BASIC16.23■□□□□ 0.19
C11orf88Q6PI97 GATS-209ENST00000454084 1030 ntTSL 3 BASIC16.23■□□□□ 0.19
C11orf88Q6PI97 SCARA5-203ENST00000518030 1074 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
C11orf88Q6PI97 HAGHL-213ENST00000564545 663 ntTSL 3 BASIC16.23■□□□□ 0.19
C11orf88Q6PI97 PRORSD1P-203ENST00000579162 626 ntTSL 5 BASIC16.23■□□□□ 0.19
C11orf88Q6PI97 AC105020.6-201ENST00000621523 1217 ntBASIC16.23■□□□□ 0.19
C11orf88Q6PI97 HS3ST3B1-201ENST00000360954 5367 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
C11orf88Q6PI97 KL-201ENST00000380099 5006 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
C11orf88Q6PI97 CASC2-205ENST00000454781 2216 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
C11orf88Q6PI97 STX2-201ENST00000261653 3331 ntAPPRIS ALT1 TSL 1 (best) BASIC16.23■□□□□ 0.19
C11orf88Q6PI97 FARSA-207ENST00000588025 2057 ntTSL 5 BASIC16.23■□□□□ 0.19
C11orf88Q6PI97 WAPL-202ENST00000298767 6333 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
C11orf88Q6PI97 KRT19-201ENST00000361566 1390 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
C11orf88Q6PI97 GPS2-201ENST00000380728 1379 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
C11orf88Q6PI97 C16orf59-210ENST00000569496 1911 ntAPPRIS ALT2 TSL 5 BASIC16.23■□□□□ 0.19
C11orf88Q6PI97 NPEPL1-203ENST00000525817 1780 ntTSL 2 BASIC16.23■□□□□ 0.19
C11orf88Q6PI97 ZNF211-203ENST00000299871 2577 ntAPPRIS ALT2 TSL 3 BASIC16.23■□□□□ 0.19
C11orf88Q6PI97 FBXL22-202ENST00000534939 2443 ntAPPRIS ALT2 TSL 3 BASIC16.23■□□□□ 0.19
C11orf88Q6PI97 TREX2-206ENST00000370232 1864 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
C11orf88Q6PI97 IL4I1-202ENST00000391826 1863 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
C11orf88Q6PI97 TMEM191A-208ENST00000450925 1961 ntTSL 2 BASIC16.22■□□□□ 0.19
C11orf88Q6PI97 LMNB1-202ENST00000395354 1572 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
C11orf88Q6PI97 SEMA3B-209ENST00000456560 2221 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
C11orf88Q6PI97 ANKHD1-EIF4EBP3-203ENST00000532219 8246 ntAPPRIS P1 TSL 2 BASIC16.22■□□□□ 0.19
C11orf88Q6PI97 ANKMY1-209ENST00000405523 1827 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
C11orf88Q6PI97 AC141586.3-201ENST00000562166 1838 ntBASIC16.22■□□□□ 0.19
C11orf88Q6PI97 POLI-207ENST00000579434 2705 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
C11orf88Q6PI97 AC139713.2-201ENST00000641328 2723 ntBASIC16.22■□□□□ 0.19
C11orf88Q6PI97 CACNA2D1-203ENST00000423588 1429 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
C11orf88Q6PI97 EPB41L2-211ENST00000525271 2568 ntTSL 2 BASIC16.22■□□□□ 0.19
C11orf88Q6PI97 POLR2J-202ENST00000393794 784 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
C11orf88Q6PI97 AC007040.1-201ENST00000416229 477 ntTSL 3 BASIC16.22■□□□□ 0.19
C11orf88Q6PI97 GPX1-202ENST00000419783 1146 ntAPPRIS P2 TSL 1 (best) BASIC16.22■□□□□ 0.19
C11orf88Q6PI97 HOTAIRM1-203ENST00000429611 722 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
C11orf88Q6PI97 KHDRBS1-204ENST00000492989 1215 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
C11orf88Q6PI97 AC093827.2-201ENST00000512654 315 ntBASIC16.22■□□□□ 0.19
C11orf88Q6PI97 RRAS2-203ENST00000526063 970 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
C11orf88Q6PI97 RRAS2-208ENST00000532814 982 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
C11orf88Q6PI97 AC006058.3-201ENST00000606217 1069 ntBASIC16.22■□□□□ 0.19
C11orf88Q6PI97 MAPK14-210ENST00000622903 1003 ntTSL 5 BASIC16.22■□□□□ 0.19
C11orf88Q6PI97 DAB2IP-201ENST00000259371 5469 ntAPPRIS P4 TSL 5 BASIC16.22■□□□□ 0.19
C11orf88Q6PI97 PMS1-206ENST00000418224 3018 ntTSL 5 BASIC16.22■□□□□ 0.19
C11orf88Q6PI97 ACTL6A-201ENST00000392662 1899 ntTSL 2 BASIC16.22■□□□□ 0.19
C11orf88Q6PI97 PHGDH-210ENST00000641115 1638 ntBASIC16.22■□□□□ 0.19
C11orf88Q6PI97 C2orf81-201ENST00000290390 2227 ntAPPRIS P5 TSL 5 BASIC16.22■□□□□ 0.19
C11orf88Q6PI97 JRK-209ENST00000612905 9124 ntAPPRIS P4 TSL 2 BASIC16.22■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 41.1 ms