Protein–RNA interactions for Protein: Q5VT99

LRRC38, Leucine-rich repeat-containing protein 38, humanhuman

Predictions only

Length 294 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC38Q5VT99 PHKA1-204ENST00000373545 6173 ntTSL 5 BASIC19.37■□□□□ 0.69
LRRC38Q5VT99 C12orf42-205ENST00000548048 1532 ntAPPRIS ALT2 TSL 5 BASIC19.37■□□□□ 0.69
LRRC38Q5VT99 HOXC6-202ENST00000394331 2943 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
LRRC38Q5VT99 TMTC1-203ENST00000539277 2758 ntAPPRIS P2 TSL 1 (best) BASIC19.37■□□□□ 0.69
LRRC38Q5VT99 DOK7-201ENST00000340083 2562 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
LRRC38Q5VT99 DOK7-203ENST00000507039 2551 ntTSL 2 BASIC19.37■□□□□ 0.69
LRRC38Q5VT99 MSGN1-201ENST00000281047 606 ntAPPRIS P1 BASIC19.37■□□□□ 0.69
LRRC38Q5VT99 SNCG-201ENST00000348795 684 ntTSL 2 BASIC19.37■□□□□ 0.69
LRRC38Q5VT99 AL445645.1-201ENST00000451318 1019 ntTSL 2 BASIC19.37■□□□□ 0.69
LRRC38Q5VT99 AC100839.1-201ENST00000559589 577 ntTSL 4 BASIC19.37■□□□□ 0.69
LRRC38Q5VT99 AC008763.3-201ENST00000597959 777 ntAPPRIS P1 TSL 4 BASIC19.37■□□□□ 0.69
LRRC38Q5VT99 AC026471.5-201ENST00000615068 467 ntBASIC19.37■□□□□ 0.69
LRRC38Q5VT99 TARDBP-228ENST00000629725 1031 ntTSL 5 BASIC19.37■□□□□ 0.69
LRRC38Q5VT99 ZNF274-203ENST00000424679 2539 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
LRRC38Q5VT99 MAPK9-208ENST00000455781 4336 ntAPPRIS ALT1 TSL 2 BASIC19.37■□□□□ 0.69
LRRC38Q5VT99 CTNNBL1-204ENST00000405275 2076 ntTSL 5 BASIC19.37■□□□□ 0.69
LRRC38Q5VT99 PKN1-201ENST00000242783 3069 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
LRRC38Q5VT99 SLC39A5-201ENST00000266980 2031 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
LRRC38Q5VT99 CTNNBL1-201ENST00000361383 1925 ntAPPRIS P2 TSL 1 (best) BASIC19.37■□□□□ 0.69
LRRC38Q5VT99 WIPF1-206ENST00000409891 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
LRRC38Q5VT99 ECHDC1-214ENST00000474289 2443 ntAPPRIS P3 TSL 5 BASIC19.36■□□□□ 0.69
LRRC38Q5VT99 RAB11FIP4-211ENST00000621161 8628 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
LRRC38Q5VT99 ADGRA2-201ENST00000315215 6270 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
LRRC38Q5VT99 ANKRD17-211ENST00000639793 3486 ntTSL 5 BASIC19.36■□□□□ 0.69
LRRC38Q5VT99 SOD2-206ENST00000452684 2045 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
LRRC38Q5VT99 EMC6-201ENST00000248378 653 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
LRRC38Q5VT99 NDUFS6-201ENST00000274137 1082 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
LRRC38Q5VT99 WDR74-201ENST00000278856 1289 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
LRRC38Q5VT99 NTAN1-201ENST00000287706 1204 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
LRRC38Q5VT99 TPPP3-201ENST00000290942 1116 ntAPPRIS P1 TSL 2 BASIC19.36■□□□□ 0.69
LRRC38Q5VT99 UXT-201ENST00000333119 574 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
LRRC38Q5VT99 ICAM4-202ENST00000380770 1211 ntAPPRIS P3 TSL 1 (best) BASIC19.36■□□□□ 0.69
LRRC38Q5VT99 TPPP3-202ENST00000393957 1058 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
LRRC38Q5VT99 AC007040.1-201ENST00000416229 477 ntTSL 3 BASIC19.36■□□□□ 0.69
LRRC38Q5VT99 CRYGFP-201ENST00000418459 633 ntBASIC19.36■□□□□ 0.69
LRRC38Q5VT99 ATP5S-204ENST00000426751 1171 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
LRRC38Q5VT99 DBNL-214ENST00000456905 1241 ntTSL 2 BASIC19.36■□□□□ 0.69
LRRC38Q5VT99 FOXN3-AS1-201ENST00000555562 1077 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
LRRC38Q5VT99 MIEF2-207ENST00000578621 540 ntTSL 4 BASIC19.36■□□□□ 0.69
LRRC38Q5VT99 AP005263.1-201ENST00000579126 914 ntTSL 2 BASIC19.36■□□□□ 0.69
LRRC38Q5VT99 AL158151.3-201ENST00000599172 696 ntTSL 5 BASIC19.36■□□□□ 0.69
LRRC38Q5VT99 Z99916.2-201ENST00000604037 246 ntBASIC19.36■□□□□ 0.69
LRRC38Q5VT99 HNRNPM-201ENST00000325495 2494 ntAPPRIS P4 TSL 1 (best) BASIC19.36■□□□□ 0.69
LRRC38Q5VT99 NECTIN3-206ENST00000485303 3664 ntAPPRIS P3 TSL 1 (best) BASIC19.36■□□□□ 0.69
LRRC38Q5VT99 LONRF1-208ENST00000533751 3043 ntTSL 5 BASIC19.36■□□□□ 0.69
LRRC38Q5VT99 OSMR-202ENST00000502536 1740 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
LRRC38Q5VT99 COL4A3BP-201ENST00000261415 2262 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
LRRC38Q5VT99 AL590648.2-201ENST00000427949 2225 ntTSL 2 BASIC19.36■□□□□ 0.69
LRRC38Q5VT99 C19orf25-207ENST00000588871 2128 ntTSL 5 BASIC19.36■□□□□ 0.69
LRRC38Q5VT99 ATP5L-201ENST00000300688 1577 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
LRRC38Q5VT99 STYXL1-208ENST00000451157 1570 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
LRRC38Q5VT99 CENPA-202ENST00000335756 1452 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
LRRC38Q5VT99 CABIN1-202ENST00000337989 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
LRRC38Q5VT99 NOC2LP2-201ENST00000407594 1944 ntBASIC19.35■□□□□ 0.69
LRRC38Q5VT99 PPP1R7-201ENST00000234038 2386 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
LRRC38Q5VT99 AC093677.2-201ENST00000600169 1863 ntBASIC19.35■□□□□ 0.69
LRRC38Q5VT99 KRT6A-201ENST00000330722 2310 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
LRRC38Q5VT99 RSPO4-201ENST00000217260 2707 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
LRRC38Q5VT99 SLC35A3-224ENST00000640732 1777 ntTSL 5 BASIC19.35■□□□□ 0.69
LRRC38Q5VT99 DKK3-203ENST00000525493 1326 ntTSL 2 BASIC19.35■□□□□ 0.69
LRRC38Q5VT99 USP39-201ENST00000323701 2177 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
LRRC38Q5VT99 MRPS7-204ENST00000579761 1717 ntTSL 2 BASIC19.35■□□□□ 0.69
LRRC38Q5VT99 FITM1-201ENST00000267426 1194 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
LRRC38Q5VT99 DAB1-202ENST00000371230 1150 ntTSL 5 BASIC19.35■□□□□ 0.69
LRRC38Q5VT99 TCEAL6-202ENST00000372774 1106 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
LRRC38Q5VT99 MDFI-202ENST00000373050 809 ntTSL 2 BASIC19.35■□□□□ 0.69
LRRC38Q5VT99 ELP6-205ENST00000439305 880 ntTSL 2 BASIC19.35■□□□□ 0.69
LRRC38Q5VT99 AC098864.1-204ENST00000513752 805 ntTSL 4 BASIC19.35■□□□□ 0.69
LRRC38Q5VT99 COX6C-208ENST00000522940 694 ntAPPRIS P1 TSL 3 BASIC19.35■□□□□ 0.69
LRRC38Q5VT99 SDR39U1-202ENST00000538105 1041 ntTSL 2 BASIC19.35■□□□□ 0.69
LRRC38Q5VT99 CHEK2P2-202ENST00000555186 864 ntTSL 2 BASIC19.35■□□□□ 0.69
LRRC38Q5VT99 AL354712.1-201ENST00000563570 477 ntTSL 3 BASIC19.35■□□□□ 0.69
LRRC38Q5VT99 MIR3180-5-201ENST00000583743 153 ntBASIC19.35■□□□□ 0.69
LRRC38Q5VT99 KLHL26-205ENST00000599006 989 ntTSL 5 BASIC19.35■□□□□ 0.69
LRRC38Q5VT99 CNNM3-202ENST00000377060 3308 ntTSL 2 BASIC19.35■□□□□ 0.69
LRRC38Q5VT99 ZNF302-206ENST00000505242 2849 ntAPPRIS P3 TSL 1 (best) BASIC19.35■□□□□ 0.69
LRRC38Q5VT99 SHKBP1-201ENST00000291842 2363 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
LRRC38Q5VT99 EGFL6-202ENST00000380602 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
LRRC38Q5VT99 RNF135-201ENST00000324689 1905 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
LRRC38Q5VT99 BRMS1L-201ENST00000216807 2657 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
LRRC38Q5VT99 VMAC-201ENST00000339485 2254 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
LRRC38Q5VT99 PACSIN2-203ENST00000402229 1883 ntAPPRIS P1 TSL 5 BASIC19.35■□□□□ 0.69
LRRC38Q5VT99 ZIC4-209ENST00000473123 1481 ntAPPRIS P1 TSL 2 BASIC19.35■□□□□ 0.69
LRRC38Q5VT99 KCNQ5-202ENST00000355194 6566 ntAPPRIS ALT1 TSL 5 BASIC19.35■□□□□ 0.69
LRRC38Q5VT99 KCNQ5-206ENST00000402622 6596 ntAPPRIS ALT2 TSL 5 BASIC19.35■□□□□ 0.69
LRRC38Q5VT99 AAED1-201ENST00000375234 2863 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
LRRC38Q5VT99 CCNC-207ENST00000518714 1426 ntTSL 5 BASIC19.34■□□□□ 0.69
LRRC38Q5VT99 PCBP4-210ENST00000471622 1784 ntTSL 5 BASIC19.34■□□□□ 0.69
LRRC38Q5VT99 AC135776.1-201ENST00000319817 2481 ntBASIC19.34■□□□□ 0.69
LRRC38Q5VT99 FBXL15-201ENST00000224862 2362 ntAPPRIS P2 TSL 1 (best) BASIC19.34■□□□□ 0.69
LRRC38Q5VT99 ADORA1-202ENST00000337894 2919 ntAPPRIS P1 TSL 2 BASIC19.34■□□□□ 0.69
LRRC38Q5VT99 DSCR9-201ENST00000454482 1644 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
LRRC38Q5VT99 BAG3-201ENST00000369085 2571 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
LRRC38Q5VT99 BCL7B-206ENST00000455335 985 ntTSL 3 BASIC19.34■□□□□ 0.69
LRRC38Q5VT99 AC089999.2-201ENST00000552525 248 ntTSL 3 BASIC19.34■□□□□ 0.69
LRRC38Q5VT99 USP36-216ENST00000589424 970 ntTSL 5 BASIC19.34■□□□□ 0.69
LRRC38Q5VT99 AL023803.3-201ENST00000615559 522 ntBASIC19.34■□□□□ 0.69
LRRC38Q5VT99 PCSK7-201ENST00000320934 4649 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
LRRC38Q5VT99 ERICH1-201ENST00000262109 1813 ntAPPRIS P2 TSL 1 (best) BASIC19.34■□□□□ 0.69
LRRC38Q5VT99 EDC3-214ENST00000568176 1825 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 22.5 ms