Protein–RNA interactions for Protein: Q59EK9

RUNDC3A, RUN domain-containing protein 3A, humanhuman

Predictions only

Length 446 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RUNDC3AQ59EK9 STIM2-212ENST00000639640 2241 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
RUNDC3AQ59EK9 CBX2-202ENST00000310942 4644 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
RUNDC3AQ59EK9 RIOX2-201ENST00000333396 5347 ntAPPRIS ALT1 TSL 1 (best) BASIC17.64■□□□□ 0.41
RUNDC3AQ59EK9 SLC2A14-214ENST00000542505 1650 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
RUNDC3AQ59EK9 IL17RC-206ENST00000416074 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
RUNDC3AQ59EK9 AC087500.1-202ENST00000571689 1715 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
RUNDC3AQ59EK9 WISP2-201ENST00000190983 1403 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
RUNDC3AQ59EK9 TWIST2-202ENST00000612363 1404 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
RUNDC3AQ59EK9 AC118553.2-202ENST00000638792 2729 ntAPPRIS ALT2 TSL 5 BASIC17.63■□□□□ 0.41
RUNDC3AQ59EK9 INO80E-207ENST00000563197 2103 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
RUNDC3AQ59EK9 TBXAS1-204ENST00000416849 2505 ntTSL 5 BASIC17.63■□□□□ 0.41
RUNDC3AQ59EK9 AC093677.2-201ENST00000600169 1863 ntBASIC17.63■□□□□ 0.41
RUNDC3AQ59EK9 GNE-201ENST00000377902 2565 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
RUNDC3AQ59EK9 AGAP2-201ENST00000257897 5388 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
RUNDC3AQ59EK9 TMEM255B-202ENST00000375353 6100 ntAPPRIS P2 TSL 1 (best) BASIC17.63■□□□□ 0.41
RUNDC3AQ59EK9 NUDT16-201ENST00000502852 1552 ntTSL 2 BASIC17.63■□□□□ 0.41
RUNDC3AQ59EK9 C19orf57-208ENST00000591586 1559 ntAPPRIS ALT2 TSL 5 BASIC17.63■□□□□ 0.41
RUNDC3AQ59EK9 FAM46A-203ENST00000369756 5537 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
RUNDC3AQ59EK9 PRMT2-203ENST00000355680 2688 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
RUNDC3AQ59EK9 C10orf91-201ENST00000321248 1257 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
RUNDC3AQ59EK9 FAM86C1-203ENST00000426628 952 ntAPPRIS ALT2 TSL 2 BASIC17.63■□□□□ 0.41
RUNDC3AQ59EK9 NME6-209ENST00000442597 757 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
RUNDC3AQ59EK9 SPI1-204ENST00000533968 1290 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
RUNDC3AQ59EK9 LINC01578-208ENST00000557147 490 ntTSL 3 BASIC17.63■□□□□ 0.41
RUNDC3AQ59EK9 REST-211ENST00000640168 1268 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
RUNDC3AQ59EK9 ESPNP-201ENST00000270691 2015 ntBASIC17.63■□□□□ 0.41
RUNDC3AQ59EK9 CTSB-202ENST00000353047 3875 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
RUNDC3AQ59EK9 PRSS35-201ENST00000369700 2440 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
RUNDC3AQ59EK9 RNFT2-204ENST00000407967 2415 ntTSL 5 BASIC17.63■□□□□ 0.41
RUNDC3AQ59EK9 MAEA-201ENST00000264750 2058 ntTSL 2 BASIC17.63■□□□□ 0.41
RUNDC3AQ59EK9 ZNF131-206ENST00000505606 3209 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
RUNDC3AQ59EK9 NOMO3-202ENST00000399336 4356 ntAPPRIS P2 TSL 1 (best) BASIC17.63■□□□□ 0.41
RUNDC3AQ59EK9 GSDMD-206ENST00000526406 2496 ntAPPRIS P2 TSL 2 BASIC17.63■□□□□ 0.41
RUNDC3AQ59EK9 NARFL-218ENST00000568545 2486 ntTSL 2 BASIC17.63■□□□□ 0.41
RUNDC3AQ59EK9 NPBWR1-201ENST00000331251 2687 ntAPPRIS P1 BASIC17.63■□□□□ 0.41
RUNDC3AQ59EK9 GALNT14-202ENST00000349752 2733 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
RUNDC3AQ59EK9 PCDHA13-201ENST00000289272 5260 ntAPPRIS P2 TSL 1 (best) BASIC17.63■□□□□ 0.41
RUNDC3AQ59EK9 FAM50B-201ENST00000380272 1628 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
RUNDC3AQ59EK9 HAUS4-218ENST00000555986 1626 ntTSL 5 BASIC17.62■□□□□ 0.41
RUNDC3AQ59EK9 RAB4B-EGLN2-201ENST00000594136 2554 ntAPPRIS P1 TSL 2 BASIC17.62■□□□□ 0.41
RUNDC3AQ59EK9 ARPIN-202ENST00000460685 2145 ntTSL 2 BASIC17.62■□□□□ 0.41
RUNDC3AQ59EK9 IL17RC-201ENST00000295981 2621 ntAPPRIS P4 TSL 2 BASIC17.62■□□□□ 0.41
RUNDC3AQ59EK9 SETMAR-206ENST00000430981 1671 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
RUNDC3AQ59EK9 USP39-201ENST00000323701 2177 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
RUNDC3AQ59EK9 WDR74-202ENST00000311713 1153 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
RUNDC3AQ59EK9 DUSP23-201ENST00000368107 756 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
RUNDC3AQ59EK9 ZNF295-AS1-201ENST00000412906 952 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
RUNDC3AQ59EK9 NELFE-206ENST00000444811 1202 ntAPPRIS ALT2 TSL 2 BASIC17.62■□□□□ 0.41
RUNDC3AQ59EK9 THAP6-213ENST00000514480 1161 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
RUNDC3AQ59EK9 AP003097.1-201ENST00000530657 1135 ntBASIC17.62■□□□□ 0.41
RUNDC3AQ59EK9 AC233263.1-201ENST00000578059 224 ntBASIC17.62■□□□□ 0.41
RUNDC3AQ59EK9 FBXO17-202ENST00000595329 1299 ntAPPRIS P1 TSL 2 BASIC17.62■□□□□ 0.41
RUNDC3AQ59EK9 AC131212.4-201ENST00000623606 975 ntBASIC17.62■□□□□ 0.41
RUNDC3AQ59EK9 TBX2-201ENST00000240328 3339 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
RUNDC3AQ59EK9 AC005865.2-201ENST00000505276 2303 ntTSL 2 BASIC17.62■□□□□ 0.41
RUNDC3AQ59EK9 QPCTL-202ENST00000366382 1814 ntTSL 2 BASIC17.62■□□□□ 0.41
RUNDC3AQ59EK9 FBXO44-201ENST00000251546 1896 ntTSL 2 BASIC17.62■□□□□ 0.41
RUNDC3AQ59EK9 LMNA-207ENST00000368301 2461 ntTSL 2 BASIC17.62■□□□□ 0.41
RUNDC3AQ59EK9 CSF1-203ENST00000369801 1364 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
RUNDC3AQ59EK9 GPBAR1-202ENST00000519574 1382 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
RUNDC3AQ59EK9 GPR83-202ENST00000539203 1909 ntTSL 5 BASIC17.62■□□□□ 0.41
RUNDC3AQ59EK9 JAKMIP1-208ENST00000637373 1362 ntTSL 5 BASIC17.62■□□□□ 0.41
RUNDC3AQ59EK9 NETO1-201ENST00000327305 3058 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
RUNDC3AQ59EK9 TLNRD1-201ENST00000267984 4845 ntAPPRIS P1 BASIC17.62■□□□□ 0.41
RUNDC3AQ59EK9 C21orf58-203ENST00000397680 2624 ntAPPRIS ALT2 TSL 2 BASIC17.62■□□□□ 0.41
RUNDC3AQ59EK9 CDHR1-201ENST00000332904 2694 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
RUNDC3AQ59EK9 ZDHHC2-201ENST00000262096 6377 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
RUNDC3AQ59EK9 MAFK-201ENST00000343242 3368 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
RUNDC3AQ59EK9 GSEC-202ENST00000629441 1572 ntTSL 2 BASIC17.62■□□□□ 0.41
RUNDC3AQ59EK9 PHC1-212ENST00000543824 4292 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
RUNDC3AQ59EK9 LYPD3-201ENST00000244333 1694 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
RUNDC3AQ59EK9 PPAN-P2RY11-201ENST00000393796 2385 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
RUNDC3AQ59EK9 MBD1-208ENST00000398493 1845 ntTSL 5 BASIC17.61■□□□□ 0.41
RUNDC3AQ59EK9 SMPD4-202ENST00000409031 4896 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
RUNDC3AQ59EK9 FGFR3-202ENST00000340107 4293 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
RUNDC3AQ59EK9 SNX17-201ENST00000233575 2044 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
RUNDC3AQ59EK9 TRIM50-201ENST00000333149 2047 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
RUNDC3AQ59EK9 MST1R-214ENST00000613534 2025 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
RUNDC3AQ59EK9 FRS3-201ENST00000259748 2094 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
RUNDC3AQ59EK9 COX7A2L-201ENST00000234301 1112 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
RUNDC3AQ59EK9 MEA1-201ENST00000244711 1089 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
RUNDC3AQ59EK9 CD99-203ENST00000381184 918 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
RUNDC3AQ59EK9 KRASP1-201ENST00000407852 552 ntBASIC17.61■□□□□ 0.41
RUNDC3AQ59EK9 DERL1-203ENST00000419562 918 ntTSL 2 BASIC17.61■□□□□ 0.41
RUNDC3AQ59EK9 CT47A12-201ENST00000419982 1165 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
RUNDC3AQ59EK9 AC004980.1-204ENST00000429707 299 ntBASIC17.61■□□□□ 0.41
RUNDC3AQ59EK9 IDH1-AS1-202ENST00000448588 489 ntTSL 3 BASIC17.61■□□□□ 0.41
RUNDC3AQ59EK9 SUMO2-203ENST00000578238 490 ntTSL 2 BASIC17.61■□□□□ 0.41
RUNDC3AQ59EK9 C17orf50-201ENST00000603305 569 ntTSL 3 BASIC17.61■□□□□ 0.41
RUNDC3AQ59EK9 C17orf50-203ENST00000605587 1018 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
RUNDC3AQ59EK9 TMEM191B-203ENST00000613597 366 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
RUNDC3AQ59EK9 AL023875.1-201ENST00000640777 796 ntBASIC17.61■□□□□ 0.41
RUNDC3AQ59EK9 SLC22A4-201ENST00000200652 2201 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
RUNDC3AQ59EK9 FGFR1-203ENST00000341462 6054 ntTSL 5 BASIC17.61■□□□□ 0.41
RUNDC3AQ59EK9 FARP2-202ENST00000373287 2580 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
RUNDC3AQ59EK9 ANXA3-201ENST00000264908 1657 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
RUNDC3AQ59EK9 OLFM2-203ENST00000590841 1665 ntTSL 2 BASIC17.61■□□□□ 0.41
RUNDC3AQ59EK9 PDE1C-206ENST00000396193 5109 ntAPPRIS P4 TSL 2 BASIC17.61■□□□□ 0.41
RUNDC3AQ59EK9 KMT5B-206ENST00000405515 2869 ntTSL 5 BASIC17.61■□□□□ 0.41
RUNDC3AQ59EK9 ARNT-212ENST00000515192 2892 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 29.8 ms