Protein–RNA interactions for Protein: Q495M9

USH1G, Usher syndrome type-1G protein, humanhuman

Predictions only

Length 461 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USH1GQ495M9 NDUFV2-AS1-203ENST00000608008 779 ntBASIC21.4■■□□□ 1.02
USH1GQ495M9 AL807752.6-202ENST00000622933 765 ntAPPRIS P5 TSL 3 BASIC21.4■■□□□ 1.02
USH1GQ495M9 MTSS1-203ENST00000431961 1711 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
USH1GQ495M9 BHLHE22-201ENST00000321870 3262 ntAPPRIS P1 BASIC21.4■■□□□ 1.02
USH1GQ495M9 UBC-201ENST00000339647 2688 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
USH1GQ495M9 ZDHHC3-205ENST00000424952 2687 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
USH1GQ495M9 SRP9-203ENST00000366839 1596 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
USH1GQ495M9 PSRC1-202ENST00000369904 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC21.4■■□□□ 1.02
USH1GQ495M9 EDNRA-206ENST00000511804 1569 ntTSL 2 BASIC21.4■■□□□ 1.02
USH1GQ495M9 SMAD7-201ENST00000262158 3087 ntAPPRIS P3 TSL 1 (best) BASIC21.4■■□□□ 1.02
USH1GQ495M9 NSMF-201ENST00000265663 2981 ntAPPRIS P3 TSL 1 (best) BASIC21.39■■□□□ 1.02
USH1GQ495M9 OGFOD2-207ENST00000536150 1956 ntTSL 2 BASIC21.39■■□□□ 1.02
USH1GQ495M9 KRT8P7-201ENST00000533003 1432 ntBASIC21.39■■□□□ 1.02
USH1GQ495M9 STXBP2-202ENST00000414284 1859 ntAPPRIS ALT1 TSL 1 (best) BASIC21.39■■□□□ 1.02
USH1GQ495M9 SEMA3B-202ENST00000418576 1765 ntTSL 2 BASIC21.39■■□□□ 1.01
USH1GQ495M9 ZACN-201ENST00000334586 1335 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
USH1GQ495M9 AGO3-202ENST00000324350 1726 ntTSL 2 BASIC21.39■■□□□ 1.01
USH1GQ495M9 TCTA-201ENST00000273590 2146 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
USH1GQ495M9 RPA2-201ENST00000313433 1237 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
USH1GQ495M9 FAM187B-201ENST00000324675 1184 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
USH1GQ495M9 TNFRSF10C-202ENST00000397703 1242 ntTSL 2 BASIC21.39■■□□□ 1.01
USH1GQ495M9 TRIM73-203ENST00000437796 1169 ntAPPRIS P2 TSL 1 (best) BASIC21.39■■□□□ 1.01
USH1GQ495M9 TBC1D9B-220ENST00000630103 303 ntTSL 5 BASIC21.39■■□□□ 1.01
USH1GQ495M9 RSAD1-201ENST00000258955 2528 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
USH1GQ495M9 AC009041.2-204ENST00000568394 3343 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
USH1GQ495M9 PDCD10-201ENST00000392750 2067 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
USH1GQ495M9 FAM57A-201ENST00000301324 2013 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
USH1GQ495M9 ACBD4-207ENST00000586346 1579 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
USH1GQ495M9 ERCC2-203ENST00000391944 2334 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
USH1GQ495M9 ACSF3-202ENST00000378345 1541 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
USH1GQ495M9 GRM5-201ENST00000305432 4475 ntAPPRIS P3 TSL 1 (best) BASIC21.39■■□□□ 1.01
USH1GQ495M9 GPR35-201ENST00000319838 2249 ntAPPRIS P3 TSL 2 BASIC21.39■■□□□ 1.01
USH1GQ495M9 BST1-201ENST00000265016 1480 ntAPPRIS P2 TSL 1 (best) BASIC21.39■■□□□ 1.01
USH1GQ495M9 PCSK6-214ENST00000611716 4409 ntAPPRIS P4 TSL 1 (best) BASIC21.39■■□□□ 1.01
USH1GQ495M9 ARAP1-AS2-201ENST00000500163 1824 ntTSL 2 BASIC21.39■■□□□ 1.01
USH1GQ495M9 RAB11FIP4-211ENST00000621161 8628 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
USH1GQ495M9 C6orf203-202ENST00000405204 1420 ntAPPRIS P1 TSL 2 BASIC21.38■■□□□ 1.01
USH1GQ495M9 RBM45-201ENST00000286070 1785 ntAPPRIS P2 TSL 1 (best) BASIC21.38■■□□□ 1.01
USH1GQ495M9 AP5S1-202ENST00000379567 1791 ntAPPRIS P1 TSL 2 BASIC21.38■■□□□ 1.01
USH1GQ495M9 MMAB-204ENST00000537236 1342 ntTSL 3 BASIC21.38■■□□□ 1.01
USH1GQ495M9 AL360181.3-201ENST00000468317 1605 ntAPPRIS P1 TSL 5 BASIC21.38■■□□□ 1.01
USH1GQ495M9 BCL2L10-201ENST00000260442 1249 ntAPPRIS P3 TSL 1 (best) BASIC21.38■■□□□ 1.01
USH1GQ495M9 PDLIM7-205ENST00000393551 1226 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
USH1GQ495M9 AL645929.1-201ENST00000420084 975 ntBASIC21.38■■□□□ 1.01
USH1GQ495M9 AL603832.1-201ENST00000421943 449 ntTSL 5 BASIC21.38■■□□□ 1.01
USH1GQ495M9 AC116353.4-201ENST00000507279 576 ntTSL 4 BASIC21.38■■□□□ 1.01
USH1GQ495M9 FAM53C-211ENST00000513056 923 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
USH1GQ495M9 AC087623.2-201ENST00000528407 534 ntTSL 4 BASIC21.38■■□□□ 1.01
USH1GQ495M9 CLDN7-204ENST00000571881 735 ntTSL 3 BASIC21.38■■□□□ 1.01
USH1GQ495M9 LINC00092-202ENST00000580908 580 ntTSL 2 BASIC21.38■■□□□ 1.01
USH1GQ495M9 METTL23-204ENST00000586752 904 ntTSL 2 BASIC21.38■■□□□ 1.01
USH1GQ495M9 NAT14-202ENST00000587400 416 ntTSL 5 BASIC21.38■■□□□ 1.01
USH1GQ495M9 ILKAP-212ENST00000622223 1088 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
USH1GQ495M9 INSM1-201ENST00000310227 2829 ntAPPRIS P1 BASIC21.38■■□□□ 1.01
USH1GQ495M9 SPTBN4-201ENST00000338932 8686 ntAPPRIS ALT1 TSL 5 BASIC21.38■■□□□ 1.01
USH1GQ495M9 FXYD6-211ENST00000539526 2132 ntAPPRIS P2 TSL 1 (best) BASIC21.38■■□□□ 1.01
USH1GQ495M9 ASMTL-201ENST00000381317 2027 ntAPPRIS P3 TSL 1 (best) BASIC21.38■■□□□ 1.01
USH1GQ495M9 AP3S1-201ENST00000316788 1730 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
USH1GQ495M9 ERLIN2-202ENST00000335171 1742 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
USH1GQ495M9 ZNF655-203ENST00000357864 1370 ntTSL 2 BASIC21.37■■□□□ 1.01
USH1GQ495M9 TRAPPC12-202ENST00000382110 2483 ntAPPRIS P2 TSL 2 BASIC21.37■■□□□ 1.01
USH1GQ495M9 MIR4300HG-201ENST00000500502 1397 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
USH1GQ495M9 C11orf80-214ENST00000532565 1948 ntAPPRIS ALT2 TSL 5 BASIC21.37■■□□□ 1.01
USH1GQ495M9 ZNF554-201ENST00000317243 2736 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
USH1GQ495M9 TNFSF11-203ENST00000398795 2199 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
USH1GQ495M9 CCDC47-202ENST00000403162 2195 ntAPPRIS P1 TSL 2 BASIC21.37■■□□□ 1.01
USH1GQ495M9 TRIM58-201ENST00000366481 3225 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
USH1GQ495M9 AGAP3-202ENST00000397238 3225 ntAPPRIS P2 TSL 1 (best) BASIC21.37■■□□□ 1.01
USH1GQ495M9 PDZD3-203ENST00000525131 1882 ntTSL 2 BASIC21.37■■□□□ 1.01
USH1GQ495M9 UNG-202ENST00000336865 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC21.37■■□□□ 1.01
USH1GQ495M9 YTHDC2-207ENST00000515883 2629 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
USH1GQ495M9 GCOM1-202ENST00000380569 1846 ntAPPRIS P3 TSL 2 BASIC21.37■■□□□ 1.01
USH1GQ495M9 RBM26-202ENST00000438724 5152 ntAPPRIS ALT1 TSL 1 (best) BASIC21.37■■□□□ 1.01
USH1GQ495M9 MAPK8IP1-201ENST00000241014 3050 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
USH1GQ495M9 C20orf196-201ENST00000303142 1154 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
USH1GQ495M9 MYD88-206ENST00000443433 914 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
USH1GQ495M9 KLHL21-204ENST00000467612 1056 ntTSL 3 BASIC21.37■■□□□ 1.01
USH1GQ495M9 AC016582.2-201ENST00000591908 446 ntTSL 3 BASIC21.37■■□□□ 1.01
USH1GQ495M9 AL136038.4-201ENST00000603606 1261 ntBASIC21.37■■□□□ 1.01
USH1GQ495M9 FAM3A-204ENST00000369643 1521 ntAPPRIS P1 TSL 2 BASIC21.37■■□□□ 1.01
USH1GQ495M9 EEF1AKMT2-201ENST00000368836 1462 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
USH1GQ495M9 LRRC1-202ENST00000370888 3180 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
USH1GQ495M9 CYP2D7-201ENST00000358097 1655 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
USH1GQ495M9 UTP18-201ENST00000225298 1894 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
USH1GQ495M9 ESPN-205ENST00000461727 1869 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
USH1GQ495M9 TMEM151A-201ENST00000327259 2562 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
USH1GQ495M9 PDP1-208ENST00000520728 2554 ntAPPRIS P3 TSL 1 (best) BASIC21.37■■□□□ 1.01
USH1GQ495M9 SERPINH1-215ENST00000533603 2299 ntAPPRIS P1 TSL 2 BASIC21.36■■□□□ 1.01
USH1GQ495M9 TUBA3C-201ENST00000400113 1551 ntAPPRIS P1 TSL 5 BASIC21.36■■□□□ 1.01
USH1GQ495M9 YBX3-201ENST00000228251 1796 ntAPPRIS P3 TSL 1 (best) BASIC21.36■■□□□ 1.01
USH1GQ495M9 NTMT1-203ENST00000372483 1315 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
USH1GQ495M9 CD72-201ENST00000259633 1548 ntAPPRIS P2 TSL 1 (best) BASIC21.36■■□□□ 1.01
USH1GQ495M9 USP21-201ENST00000289865 2195 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
USH1GQ495M9 AL391807.1-203ENST00000604392 2365 ntBASIC21.36■■□□□ 1.01
USH1GQ495M9 CPZ-201ENST00000315782 2136 ntAPPRIS P3 TSL 1 (best) BASIC21.36■■□□□ 1.01
USH1GQ495M9 AK2-204ENST00000467905 880 ntAPPRIS ALT1 TSL 2 BASIC21.36■■□□□ 1.01
USH1GQ495M9 AC083906.6-201ENST00000641366 219 ntBASIC21.36■■□□□ 1.01
USH1GQ495M9 AC099343.3-201ENST00000605834 2503 ntBASIC21.36■■□□□ 1.01
USH1GQ495M9 VBP1-201ENST00000286428 1686 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
USH1GQ495M9 GRB7-202ENST00000394204 1667 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
Retrieved 100 of 98,524 protein–RNA pairs in 23 ms