Protein–RNA interactions for Protein: Q2I0M5

RSPO4, R-spondin-4, humanhuman

Predicted RBP Predictions only

Length 234 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RSPO4Q2I0M5 HTRA3-202ENST00000382512 2023 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
RSPO4Q2I0M5 SMARCD2-203ENST00000448276 2716 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
RSPO4Q2I0M5 GALNT10-202ENST00000377661 3778 ntTSL 5 BASIC18.03■□□□□ 0.48
RSPO4Q2I0M5 NAGK-229ENST00000613852 1801 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
RSPO4Q2I0M5 PDLIM2-205ENST00000397761 1491 ntAPPRIS P1 TSL 5 BASIC18.03■□□□□ 0.48
RSPO4Q2I0M5 GMPPA-213ENST00000622191 1473 ntTSL 5 BASIC18.03■□□□□ 0.48
RSPO4Q2I0M5 TMEM151B-202ENST00000451188 4895 ntAPPRIS P2 TSL 5 BASIC18.03■□□□□ 0.48
RSPO4Q2I0M5 CD320-201ENST00000301458 1250 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
RSPO4Q2I0M5 CDC26-201ENST00000374206 872 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
RSPO4Q2I0M5 ZGLP1-201ENST00000403352 1028 ntAPPRIS ALT2 TSL 5 BASIC18.03■□□□□ 0.48
RSPO4Q2I0M5 RPS2P1-201ENST00000434010 821 ntBASIC18.03■□□□□ 0.48
RSPO4Q2I0M5 MPIG6B-210ENST00000480039 790 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
RSPO4Q2I0M5 AC091180.3-201ENST00000506504 963 ntTSL 3 BASIC18.03■□□□□ 0.48
RSPO4Q2I0M5 UBE2V2-201ENST00000517630 612 ntTSL 4 BASIC18.03■□□□□ 0.48
RSPO4Q2I0M5 FLT1-204ENST00000541932 2969 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
RSPO4Q2I0M5 MTUS2-205ENST00000542829 1165 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
RSPO4Q2I0M5 LINC01607-201ENST00000607172 621 ntTSL 2 BASIC18.03■□□□□ 0.48
RSPO4Q2I0M5 ZFC3H1-206ENST00000548100 1771 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
RSPO4Q2I0M5 FAM212B-203ENST00000444059 1423 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
RSPO4Q2I0M5 RPS6KL1-216ENST00000557413 2425 ntAPPRIS P1 TSL 5 BASIC18.03■□□□□ 0.48
RSPO4Q2I0M5 AC092667.1-201ENST00000434301 2586 ntBASIC18.03■□□□□ 0.48
RSPO4Q2I0M5 DYRK3-202ENST00000367108 2218 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
RSPO4Q2I0M5 AL353692.3-201ENST00000407031 1396 ntBASIC18.03■□□□□ 0.48
RSPO4Q2I0M5 PILRB-207ENST00000448382 2314 ntTSL 2 BASIC18.03■□□□□ 0.48
RSPO4Q2I0M5 ME3-212ENST00000543262 2311 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
RSPO4Q2I0M5 MAP7-206ENST00000611373 2317 ntAPPRIS ALT2 TSL 5 BASIC18.03■□□□□ 0.48
RSPO4Q2I0M5 SUMO3-201ENST00000332859 1807 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
RSPO4Q2I0M5 TEX264-215ENST00000611400 1488 ntAPPRIS P3 TSL 5 BASIC18.02■□□□□ 0.48
RSPO4Q2I0M5 WDR34-201ENST00000372715 1755 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
RSPO4Q2I0M5 FBXL18-203ENST00000453700 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.48
RSPO4Q2I0M5 ADAM9-203ENST00000466936 2053 ntTSL 2 BASIC18.02■□□□□ 0.48
RSPO4Q2I0M5 MAGEA6-201ENST00000329342 1740 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
RSPO4Q2I0M5 MAGEA3-201ENST00000370278 1724 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
RSPO4Q2I0M5 PSMB8-202ENST00000374882 1124 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
RSPO4Q2I0M5 METTL21A-205ENST00000426075 1051 ntAPPRIS P1 TSL 2 BASIC18.02■□□□□ 0.48
RSPO4Q2I0M5 MRFAP1-203ENST00000507420 563 ntAPPRIS P1 TSL 4 BASIC18.02■□□□□ 0.48
RSPO4Q2I0M5 FOXP3-205ENST00000518685 1213 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
RSPO4Q2I0M5 AC139749.1-201ENST00000534584 1094 ntTSL 3 BASIC18.02■□□□□ 0.48
RSPO4Q2I0M5 ABO-202ENST00000538324 1147 ntAPPRIS P5 TSL 5 BASIC18.02■□□□□ 0.48
RSPO4Q2I0M5 ELOF1-204ENST00000587806 1172 ntTSL 2 BASIC18.02■□□□□ 0.48
RSPO4Q2I0M5 TEN1-204ENST00000588202 862 ntTSL 3 BASIC18.02■□□□□ 0.48
RSPO4Q2I0M5 AC024563.2-201ENST00000603282 481 ntBASIC18.02■□□□□ 0.48
RSPO4Q2I0M5 LCN8-205ENST00000612714 638 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.48
RSPO4Q2I0M5 MAPRE3-203ENST00000405074 1801 ntTSL 3 BASIC18.02■□□□□ 0.47
RSPO4Q2I0M5 TSSC4-201ENST00000333256 1686 ntAPPRIS P3 TSL 1 (best) BASIC18.02■□□□□ 0.47
RSPO4Q2I0M5 PGAM5-203ENST00000498926 2834 ntAPPRIS P1 TSL 2 BASIC18.02■□□□□ 0.47
RSPO4Q2I0M5 FOXP3-206ENST00000557224 1371 ntTSL 2 BASIC18.02■□□□□ 0.47
RSPO4Q2I0M5 TATDN2-201ENST00000287652 5342 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
RSPO4Q2I0M5 SBDS-201ENST00000246868 1631 ntAPPRIS P2 TSL 1 (best) BASIC18.01■□□□□ 0.47
RSPO4Q2I0M5 NDUFAF3-202ENST00000326925 2012 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
RSPO4Q2I0M5 ZNF821-202ENST00000425432 2000 ntAPPRIS P1 TSL 5 BASIC18.01■□□□□ 0.47
RSPO4Q2I0M5 FDFT1-210ENST00000525954 1890 ntTSL 2 BASIC18.01■□□□□ 0.47
RSPO4Q2I0M5 GLT1D1-204ENST00000442111 2995 ntAPPRIS P1 TSL 5 BASIC18.01■□□□□ 0.47
RSPO4Q2I0M5 CFP-201ENST00000247153 1713 ntAPPRIS P2 TSL 5 BASIC18.01■□□□□ 0.47
RSPO4Q2I0M5 DET1-201ENST00000268148 2267 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
RSPO4Q2I0M5 NAA60-235ENST00000576916 1567 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
RSPO4Q2I0M5 GPRIN2-202ENST00000374317 1966 ntAPPRIS P1 TSL 3 BASIC18.01■□□□□ 0.47
RSPO4Q2I0M5 STAP2-201ENST00000594605 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
RSPO4Q2I0M5 SPON2-203ENST00000431380 1802 ntAPPRIS P1 TSL 5 BASIC18.01■□□□□ 0.47
RSPO4Q2I0M5 UPF1-207ENST00000599848 5311 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
RSPO4Q2I0M5 MRGPRF-202ENST00000320913 705 ntTSL 2 BASIC18.01■□□□□ 0.47
RSPO4Q2I0M5 C1QC-203ENST00000374640 1163 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
RSPO4Q2I0M5 PNMT-202ENST00000394246 821 ntTSL 2 BASIC18.01■□□□□ 0.47
RSPO4Q2I0M5 AC007967.2-201ENST00000432613 625 ntBASIC18.01■□□□□ 0.47
RSPO4Q2I0M5 NCBP2-AS1-201ENST00000447775 562 ntTSL 5 BASIC18.01■□□□□ 0.47
RSPO4Q2I0M5 LEKR1-211ENST00000498839 616 ntTSL 3 BASIC18.01■□□□□ 0.47
RSPO4Q2I0M5 AC105202.1-202ENST00000522060 834 ntTSL 3 BASIC18.01■□□□□ 0.47
RSPO4Q2I0M5 AC106028.4-201ENST00000614509 607 ntBASIC18.01■□□□□ 0.47
RSPO4Q2I0M5 MALAT1-215ENST00000619449 794 ntTSL 3 BASIC18.01■□□□□ 0.47
RSPO4Q2I0M5 AL359644.1-202ENST00000637541 571 ntTSL 3 BASIC18.01■□□□□ 0.47
RSPO4Q2I0M5 RABEPK-202ENST00000373538 1504 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
RSPO4Q2I0M5 ADAMTS2-202ENST00000274609 2044 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
RSPO4Q2I0M5 DCAF4-202ENST00000358377 2024 ntAPPRIS P4 TSL 1 (best) BASIC18.01■□□□□ 0.47
RSPO4Q2I0M5 GAS2-202ENST00000454584 2286 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
RSPO4Q2I0M5 LYN-202ENST00000519728 2297 ntAPPRIS P3 TSL 1 (best) BASIC18.01■□□□□ 0.47
RSPO4Q2I0M5 WDR4-202ENST00000398208 2122 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
RSPO4Q2I0M5 AOC3-207ENST00000617500 2392 ntTSL 4 BASIC18.01■□□□□ 0.47
RSPO4Q2I0M5 IFNLR1-205ENST00000374421 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
RSPO4Q2I0M5 KRT8P7-201ENST00000533003 1432 ntBASIC18■□□□□ 0.47
RSPO4Q2I0M5 FSTL3-201ENST00000166139 2542 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
RSPO4Q2I0M5 KCNMA1-209ENST00000372443 5059 ntAPPRIS ALT2 TSL 5 BASIC18■□□□□ 0.47
RSPO4Q2I0M5 LCAT-201ENST00000264005 1507 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
RSPO4Q2I0M5 COCH-201ENST00000216361 2397 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
RSPO4Q2I0M5 BLOC1S2-202ENST00000370372 1249 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
RSPO4Q2I0M5 FAM19A5-204ENST00000406880 833 ntTSL 3 BASIC18■□□□□ 0.47
RSPO4Q2I0M5 AL121672.1-201ENST00000439423 1181 ntTSL 1 (best) BASIC18■□□□□ 0.47
RSPO4Q2I0M5 PAWRP1-201ENST00000451083 565 ntBASIC18■□□□□ 0.47
RSPO4Q2I0M5 CFL1-202ENST00000524553 860 ntTSL 2 BASIC18■□□□□ 0.47
RSPO4Q2I0M5 TPD52L1-211ENST00000532429 1022 ntTSL 2 BASIC18■□□□□ 0.47
RSPO4Q2I0M5 C17orf49-203ENST00000546760 764 ntTSL 5 BASIC18■□□□□ 0.47
RSPO4Q2I0M5 AC021087.4-201ENST00000563761 564 ntBASIC18■□□□□ 0.47
RSPO4Q2I0M5 COX5A-204ENST00000567270 579 ntTSL 3 BASIC18■□□□□ 0.47
RSPO4Q2I0M5 AC005306.1-201ENST00000587498 661 ntTSL 3 BASIC18■□□□□ 0.47
RSPO4Q2I0M5 AC064853.6-201ENST00000642029 303 ntAPPRIS P1 BASIC18■□□□□ 0.47
RSPO4Q2I0M5 TMEM98-206ENST00000579849 4434 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
RSPO4Q2I0M5 SPHK1-207ENST00000590959 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
RSPO4Q2I0M5 KCNIP2-207ENST00000358038 2489 ntAPPRIS ALT1 TSL 1 (best) BASIC18■□□□□ 0.47
RSPO4Q2I0M5 C19orf35-201ENST00000342063 2574 ntAPPRIS P1 TSL 2 BASIC18■□□□□ 0.47
RSPO4Q2I0M5 OLA1-204ENST00000409546 2071 ntTSL 5 BASIC18■□□□□ 0.47
RSPO4Q2I0M5 DAPK2-205ENST00000558069 1473 ntTSL 5 BASIC18■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 25.9 ms