Protein–RNA interactions for Protein: Q12864

CDH17, Cadherin-17, humanhuman

Predictions only

Length 832 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH17Q12864 MAP3K6-207ENST00000493901 4309 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
CDH17Q12864 SLC2A14-214ENST00000542505 1650 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
CDH17Q12864 POLR3E-209ENST00000564209 2464 ntTSL 2 BASIC18.85■□□□□ 0.61
CDH17Q12864 ZIC4-209ENST00000473123 1481 ntAPPRIS P1 TSL 2 BASIC18.85■□□□□ 0.61
CDH17Q12864 RELL2-202ENST00000444782 2154 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
CDH17Q12864 HOXC11-201ENST00000243082 2039 ntTSL 3 BASIC18.85■□□□□ 0.61
CDH17Q12864 ORC5-201ENST00000297431 1958 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
CDH17Q12864 PLEKHG5-206ENST00000377748 5221 ntAPPRIS ALT2 TSL 2 BASIC18.85■□□□□ 0.61
CDH17Q12864 LONP1-201ENST00000360614 3236 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
CDH17Q12864 NDUFS6-201ENST00000274137 1082 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
CDH17Q12864 UNC93B2-201ENST00000285383 730 ntBASIC18.85■□□□□ 0.61
CDH17Q12864 ANKRD10-202ENST00000310847 1193 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
CDH17Q12864 NDUFB2-203ENST00000461457 559 ntTSL 3 BASIC18.85■□□□□ 0.61
CDH17Q12864 AC004080.6-201ENST00000467897 919 ntTSL 5 BASIC18.85■□□□□ 0.61
CDH17Q12864 TMEM263-208ENST00000551489 621 ntTSL 4 BASIC18.85■□□□□ 0.61
CDH17Q12864 AC008763.3-201ENST00000597959 777 ntAPPRIS P1 TSL 4 BASIC18.85■□□□□ 0.61
CDH17Q12864 APLP2-210ENST00000528499 2530 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
CDH17Q12864 P2RX2-208ENST00000542301 1881 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
CDH17Q12864 FAM3A-201ENST00000322269 1815 ntTSL 5 BASIC18.85■□□□□ 0.61
CDH17Q12864 CDK4-202ENST00000312990 1650 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
CDH17Q12864 GPAT2P1-201ENST00000444924 1672 ntBASIC18.85■□□□□ 0.61
CDH17Q12864 MTMR12-201ENST00000264934 2215 ntTSL 2 BASIC18.85■□□□□ 0.61
CDH17Q12864 RBM24-202ENST00000379052 2703 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
CDH17Q12864 PDE9A-209ENST00000398227 1606 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
CDH17Q12864 TRIM41-202ENST00000351937 2696 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
CDH17Q12864 EEF1AKMT2-201ENST00000368836 1462 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CDH17Q12864 GUCA1A-205ENST00000541991 1921 ntTSL 5 BASIC18.84■□□□□ 0.61
CDH17Q12864 MCC-208ENST00000514701 2855 ntTSL 2 BASIC18.84■□□□□ 0.61
CDH17Q12864 AL445686.2-201ENST00000577528 1445 ntTSL 3 BASIC18.84■□□□□ 0.61
CDH17Q12864 ZBTB10-205ENST00000610895 2833 ntAPPRIS ALT2 TSL 2 BASIC18.84■□□□□ 0.61
CDH17Q12864 SMN2-202ENST00000380742 1388 ntAPPRIS ALT2 TSL 5 BASIC18.84■□□□□ 0.61
CDH17Q12864 APIP-201ENST00000395787 1366 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CDH17Q12864 PLA2G2F-201ENST00000375102 2723 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CDH17Q12864 LINC00595-207ENST00000476909 792 ntTSL 2 BASIC18.84■□□□□ 0.61
CDH17Q12864 AC098864.1-204ENST00000513752 805 ntTSL 4 BASIC18.84■□□□□ 0.61
CDH17Q12864 DHDH-203ENST00000522614 776 ntTSL 5 BASIC18.84■□□□□ 0.61
CDH17Q12864 SIVA1-207ENST00000556195 674 ntTSL 3 BASIC18.84■□□□□ 0.61
CDH17Q12864 AC016737.2-201ENST00000609273 358 ntTSL 3 BASIC18.84■□□□□ 0.61
CDH17Q12864 AATF-208ENST00000619387 2141 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CDH17Q12864 LRP1-204ENST00000553277 1693 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
CDH17Q12864 ST3GAL3-201ENST00000262915 2470 ntTSL 5 BASIC18.84■□□□□ 0.61
CDH17Q12864 DDX42-216ENST00000583590 4148 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
CDH17Q12864 JAK2-201ENST00000381652 5285 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CDH17Q12864 VPS26B-202ENST00000525095 1558 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
CDH17Q12864 LINC00461-203ENST00000504246 2300 ntTSL 2 BASIC18.84■□□□□ 0.61
CDH17Q12864 CCK-202ENST00000396169 1527 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CDH17Q12864 AC007040.2-201ENST00000606025 4170 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
CDH17Q12864 AK1-203ENST00000373176 2266 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CDH17Q12864 POMT2-201ENST00000261534 4876 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CDH17Q12864 NUDT17-201ENST00000334513 1473 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
CDH17Q12864 MADD-208ENST00000405573 1823 ntTSL 5 BASIC18.84■□□□□ 0.61
CDH17Q12864 DOK4-218ENST00000569548 1848 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CDH17Q12864 PIGH-201ENST00000216452 1420 ntAPPRIS P2 TSL 1 (best) BASIC18.83■□□□□ 0.61
CDH17Q12864 HCG11-201ENST00000411553 5696 ntBASIC18.83■□□□□ 0.61
CDH17Q12864 PPFIA1-202ENST00000389547 4133 ntAPPRIS ALT1 TSL 1 (best) BASIC18.83■□□□□ 0.61
CDH17Q12864 SNX17-201ENST00000233575 2044 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
CDH17Q12864 ANXA3-201ENST00000264908 1657 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
CDH17Q12864 GNAS-AS1-202ENST00000443966 2341 ntTSL 5 BASIC18.83■□□□□ 0.61
CDH17Q12864 EVX1-202ENST00000496902 2955 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
CDH17Q12864 ETS1-208ENST00000535549 4594 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
CDH17Q12864 HBA1-201ENST00000320868 577 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
CDH17Q12864 ID1-202ENST00000376112 994 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
CDH17Q12864 VKORC1-204ENST00000394971 664 ntTSL 5 BASIC18.83■□□□□ 0.6
CDH17Q12864 LINC00620-201ENST00000419618 996 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
CDH17Q12864 TSPY7P-201ENST00000431358 1114 ntBASIC18.83■□□□□ 0.6
CDH17Q12864 TSPY1-202ENST00000451548 1160 ntAPPRIS P5 TSL 1 (best) BASIC18.83■□□□□ 0.6
CDH17Q12864 RBM17P1-201ENST00000453646 1190 ntBASIC18.83■□□□□ 0.6
CDH17Q12864 PACRGL-207ENST00000502938 810 ntTSL 4 BASIC18.83■□□□□ 0.6
CDH17Q12864 KRT18P41-201ENST00000518924 1277 ntBASIC18.83■□□□□ 0.6
CDH17Q12864 AC044860.1-201ENST00000560756 1160 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
CDH17Q12864 PRKACA-209ENST00000590853 1101 ntTSL 5 BASIC18.83■□□□□ 0.6
CDH17Q12864 SMAGP-204ENST00000603838 816 ntTSL 2 BASIC18.83■□□□□ 0.6
CDH17Q12864 FGF13-208ENST00000626909 1039 ntTSL 2 BASIC18.83■□□□□ 0.6
CDH17Q12864 AC116565.2-201ENST00000637674 1854 ntTSL 2 BASIC18.83■□□□□ 0.6
CDH17Q12864 PHB2-203ENST00000535923 1515 ntAPPRIS P2 TSL 5 BASIC18.83■□□□□ 0.6
CDH17Q12864 C12orf42-205ENST00000548048 1532 ntAPPRIS ALT2 TSL 5 BASIC18.83■□□□□ 0.6
CDH17Q12864 C6orf118-201ENST00000230301 1812 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
CDH17Q12864 CREG2-201ENST00000324768 6383 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
CDH17Q12864 XYLT2-203ENST00000507602 2107 ntTSL 2 BASIC18.83■□□□□ 0.6
CDH17Q12864 CASD1-201ENST00000297273 3942 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
CDH17Q12864 ZNF395-211ENST00000523202 2068 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
CDH17Q12864 RASSF1-201ENST00000327761 1757 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
CDH17Q12864 CENPA-202ENST00000335756 1452 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
CDH17Q12864 CPT2-207ENST00000636867 2643 ntTSL 5 BASIC18.83■□□□□ 0.6
CDH17Q12864 FAM49B-214ENST00000519540 2021 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
CDH17Q12864 SLC47A2-201ENST00000325411 2258 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.6
CDH17Q12864 SSC5D-201ENST00000389623 4845 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.6
CDH17Q12864 PLEKHG5-212ENST00000537245 4794 ntAPPRIS ALT2 TSL 2 BASIC18.82■□□□□ 0.6
CDH17Q12864 GAL3ST4-204ENST00000423751 1695 ntTSL 3 BASIC18.82■□□□□ 0.6
CDH17Q12864 TICAM1-202ENST00000621756 1650 ntTSL 5 BASIC18.82■□□□□ 0.6
CDH17Q12864 MATN4-203ENST00000372754 2200 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
CDH17Q12864 KCNQ2-205ENST00000360480 2775 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
CDH17Q12864 DYNLL1-209ENST00000550845 1376 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
CDH17Q12864 CCDC17-209ENST00000528266 2181 ntAPPRIS P3 TSL 2 BASIC18.82■□□□□ 0.6
CDH17Q12864 MSLN-202ENST00000545450 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
CDH17Q12864 CHD1L-204ENST00000431239 2907 ntTSL 5 BASIC18.82■□□□□ 0.6
CDH17Q12864 MIR564-202ENST00000385049 94 ntBASIC18.82■□□□□ 0.6
CDH17Q12864 RHOG-202ENST00000396978 1066 ntAPPRIS P1 TSL 3 BASIC18.82■□□□□ 0.6
CDH17Q12864 AL162231.1-203ENST00000416454 465 ntAPPRIS ALT2 TSL 2 BASIC18.82■□□□□ 0.6
CDH17Q12864 PHF11-218ENST00000496623 1173 ntAPPRIS ALT2 TSL 2 BASIC18.82■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 41.5 ms