Protein–RNA interactions for Protein: Q02539

HIST1H1A, Histone H1.1, humanhuman

Predicted RBP Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H1AQ02539 WBP2-213ENST00000590221 1745 ntAPPRIS ALT1 TSL 3 BASIC14.29□□□□□ -0.12
HIST1H1AQ02539 SNRPN-207ENST00000554227 1763 ntTSL 5 BASIC14.29□□□□□ -0.12
HIST1H1AQ02539 UBQLN4P1-201ENST00000461599 1801 ntBASIC14.29□□□□□ -0.12
HIST1H1AQ02539 UTP18-201ENST00000225298 1894 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
HIST1H1AQ02539 IL4I1-202ENST00000391826 1863 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
HIST1H1AQ02539 GPT-202ENST00000394955 1885 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
HIST1H1AQ02539 AP001351.1-201ENST00000501397 1865 ntTSL 2 BASIC14.29□□□□□ -0.12
HIST1H1AQ02539 GOSR2-210ENST00000576910 1891 ntAPPRIS ALT1 TSL 5 BASIC14.29□□□□□ -0.12
HIST1H1AQ02539 WIZP1-201ENST00000531444 2299 ntBASIC14.29□□□□□ -0.12
HIST1H1AQ02539 AIFM3-203ENST00000405089 2333 ntAPPRIS ALT1 TSL 2 BASIC14.29□□□□□ -0.12
HIST1H1AQ02539 ZBTB7C-221ENST00000590800 4947 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
HIST1H1AQ02539 PTPA-201ENST00000337738 2845 ntTSL 2 BASIC14.28□□□□□ -0.12
HIST1H1AQ02539 FAM20A-205ENST00000592554 2955 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
HIST1H1AQ02539 INPP4A-204ENST00000409540 3231 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
HIST1H1AQ02539 STX3-201ENST00000337979 3299 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
HIST1H1AQ02539 PTPRU-202ENST00000373779 5579 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
HIST1H1AQ02539 PIEZO1-201ENST00000301015 8072 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
HIST1H1AQ02539 COX7A2L-201ENST00000234301 1112 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
HIST1H1AQ02539 ENOPH1-201ENST00000273920 2025 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
HIST1H1AQ02539 PRDM14-201ENST00000276594 2344 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
HIST1H1AQ02539 GCSH-201ENST00000315467 1597 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
HIST1H1AQ02539 ATXN7L2-202ENST00000369870 2318 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
HIST1H1AQ02539 PDZD7-201ENST00000370215 2032 ntTSL 2 BASIC14.28□□□□□ -0.12
HIST1H1AQ02539 RAP1GAP-204ENST00000374761 3318 ntTSL 5 BASIC14.28□□□□□ -0.12
HIST1H1AQ02539 BORCS6-201ENST00000389017 2575 ntAPPRIS P1 BASIC14.28□□□□□ -0.12
HIST1H1AQ02539 CHRFAM7A-202ENST00000397827 2794 ntTSL 5 BASIC14.28□□□□□ -0.12
HIST1H1AQ02539 NR4A2-204ENST00000409572 2878 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
HIST1H1AQ02539 ASB18-201ENST00000409749 1401 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
HIST1H1AQ02539 TMEM198B-203ENST00000482378 2230 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
HIST1H1AQ02539 SCOC-208ENST00000510586 2193 ntAPPRIS ALT1 TSL 5 BASIC14.28□□□□□ -0.12
HIST1H1AQ02539 FADS3-204ENST00000525588 1254 ntTSL 5 BASIC14.28□□□□□ -0.12
HIST1H1AQ02539 EXOSC4-202ENST00000525936 606 ntTSL 3 BASIC14.28□□□□□ -0.12
HIST1H1AQ02539 AK4-208ENST00000546702 1335 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
HIST1H1AQ02539 EMC9-206ENST00000560403 872 ntTSL 2 BASIC14.28□□□□□ -0.12
HIST1H1AQ02539 AL160286.2-201ENST00000567150 934 ntBASIC14.28□□□□□ -0.12
HIST1H1AQ02539 C1QL1P1-201ENST00000568105 661 ntBASIC14.28□□□□□ -0.12
HIST1H1AQ02539 AC009113.1-201ENST00000570267 2443 ntBASIC14.28□□□□□ -0.12
HIST1H1AQ02539 THOC6-209ENST00000575576 1360 ntTSL 5 BASIC14.28□□□□□ -0.12
HIST1H1AQ02539 LONP1-215ENST00000593119 2918 ntTSL 2 BASIC14.28□□□□□ -0.12
HIST1H1AQ02539 GABRD-205ENST00000638771 1707 ntAPPRIS ALT2 TSL 3 BASIC14.28□□□□□ -0.12
HIST1H1AQ02539 KCNH1-210ENST00000640044 1818 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
HIST1H1AQ02539 TXNRD3-205ENST00000640797 1824 ntAPPRIS ALT2 TSL 2 BASIC14.28□□□□□ -0.12
HIST1H1AQ02539 KIAA1324L-207ENST00000444627 3527 ntTSL 5 BASIC14.28□□□□□ -0.12
HIST1H1AQ02539 MTCL1-205ENST00000517570 6009 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
HIST1H1AQ02539 ADGRB2-212ENST00000527361 4919 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
HIST1H1AQ02539 USP49-202ENST00000373010 2446 ntTSL 5 BASIC14.27□□□□□ -0.12
HIST1H1AQ02539 PCBP3-205ENST00000400310 2168 ntTSL 2 BASIC14.27□□□□□ -0.12
HIST1H1AQ02539 OGFOD2-207ENST00000536150 1956 ntTSL 2 BASIC14.27□□□□□ -0.12
HIST1H1AQ02539 AC073107.1-201ENST00000633579 1962 ntTSL 5 BASIC14.27□□□□□ -0.12
HIST1H1AQ02539 LRRC3-201ENST00000291592 5869 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
HIST1H1AQ02539 TSGA10IP-203ENST00000532620 1925 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
HIST1H1AQ02539 AEBP2-201ENST00000266508 3620 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
HIST1H1AQ02539 JMY-201ENST00000396137 9042 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.12
HIST1H1AQ02539 NPEPL1-203ENST00000525817 1780 ntTSL 2 BASIC14.27□□□□□ -0.12
HIST1H1AQ02539 MED17-201ENST00000251871 5142 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
HIST1H1AQ02539 SCRIB-203ENST00000377533 5108 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
HIST1H1AQ02539 HNRNPLL-206ENST00000410076 1687 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
HIST1H1AQ02539 NPIPA8-201ENST00000525596 1565 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
HIST1H1AQ02539 ZNF561-AS1-201ENST00000585797 1593 ntTSL 2 BASIC14.27□□□□□ -0.12
HIST1H1AQ02539 PLCD3-212ENST00000619929 6107 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
HIST1H1AQ02539 ACY1-201ENST00000404366 1473 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
HIST1H1AQ02539 SETD3-202ENST00000331768 2878 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
HIST1H1AQ02539 TWF2-203ENST00000499914 1440 ntTSL 5 BASIC14.27□□□□□ -0.12
HIST1H1AQ02539 TMC6-202ENST00000322914 2786 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
HIST1H1AQ02539 CEMP1-202ENST00000567119 1374 ntAPPRIS P2 BASIC14.27□□□□□ -0.12
HIST1H1AQ02539 CROCCP3-201ENST00000263511 5368 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
HIST1H1AQ02539 MGARP-201ENST00000398955 1339 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
HIST1H1AQ02539 DDX31-206ENST00000480876 1333 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
HIST1H1AQ02539 ABHD14A-201ENST00000273596 1062 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
HIST1H1AQ02539 PSEN1-203ENST00000394157 1249 ntTSL 2 BASIC14.27□□□□□ -0.13
HIST1H1AQ02539 MDK-204ENST00000395569 686 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
HIST1H1AQ02539 KRASP1-201ENST00000407852 552 ntBASIC14.27□□□□□ -0.13
HIST1H1AQ02539 COQ10B-203ENST00000409398 879 ntTSL 3 BASIC14.27□□□□□ -0.13
HIST1H1AQ02539 AC137630.1-201ENST00000452042 782 ntTSL 4 BASIC14.27□□□□□ -0.13
HIST1H1AQ02539 SCARA5-203ENST00000518030 1074 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
HIST1H1AQ02539 BAALC-AS1-206ENST00000521383 736 ntTSL 3 BASIC14.27□□□□□ -0.13
HIST1H1AQ02539 AC233263.1-201ENST00000578059 224 ntBASIC14.27□□□□□ -0.13
HIST1H1AQ02539 MTDHP1-201ENST00000605323 784 ntBASIC14.27□□□□□ -0.13
HIST1H1AQ02539 TPGS2-221ENST00000614939 1268 ntTSL 4 BASIC14.27□□□□□ -0.13
HIST1H1AQ02539 AL023875.1-201ENST00000640777 796 ntBASIC14.27□□□□□ -0.13
HIST1H1AQ02539 KLHL40-201ENST00000287777 2517 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
HIST1H1AQ02539 PRDM8-203ENST00000504452 3706 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.13
HIST1H1AQ02539 MEPCE-202ENST00000414441 2261 ntTSL 2 BASIC14.27□□□□□ -0.13
HIST1H1AQ02539 MAP7-209ENST00000618822 4497 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.13
HIST1H1AQ02539 KDM4B-201ENST00000159111 5593 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
HIST1H1AQ02539 WNT5B-201ENST00000310594 2184 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
HIST1H1AQ02539 WIPF1-202ENST00000359761 2003 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.13
HIST1H1AQ02539 RASL11B-201ENST00000248706 1995 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
HIST1H1AQ02539 CFAP100-203ENST00000505024 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
HIST1H1AQ02539 PDE9A-206ENST00000380328 1875 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
HIST1H1AQ02539 PLCB2-201ENST00000260402 4616 ntAPPRIS P3 TSL 2 BASIC14.27□□□□□ -0.13
HIST1H1AQ02539 KANK3-201ENST00000330915 2787 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.13
HIST1H1AQ02539 QPCTL-202ENST00000366382 1814 ntTSL 2 BASIC14.27□□□□□ -0.13
HIST1H1AQ02539 IFFO1-204ENST00000396840 2677 ntAPPRIS ALT1 TSL 5 BASIC14.27□□□□□ -0.13
HIST1H1AQ02539 CAPS-201ENST00000452990 1789 ntTSL 5 BASIC14.27□□□□□ -0.13
HIST1H1AQ02539 RRS1-201ENST00000320270 1706 ntAPPRIS P1 BASIC14.27□□□□□ -0.13
HIST1H1AQ02539 SEPT2-245ENST00000616972 3446 ntTSL 2 BASIC14.27□□□□□ -0.13
HIST1H1AQ02539 C19orf48-202ENST00000391812 1666 ntAPPRIS P1 TSL 2 BASIC14.26□□□□□ -0.13
HIST1H1AQ02539 HNF1A-202ENST00000400024 2337 ntTSL 2 BASIC14.26□□□□□ -0.13
HIST1H1AQ02539 P4HB-203ENST00000439918 1502 ntTSL 5 BASIC14.26□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 22.3 ms