Protein–RNA interactions for Protein: Q00532

CDKL1, Cyclin-dependent kinase-like 1, humanhuman

Predictions only

Length 357 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL1Q00532 C7orf49-202ENST00000424142 1738 ntTSL 2 BASIC18.35■□□□□ 0.53
CDKL1Q00532 FADS1-204ENST00000433932 1690 ntTSL 2 BASIC18.35■□□□□ 0.53
CDKL1Q00532 BOD1L2-201ENST00000585477 3239 ntAPPRIS P1 BASIC18.35■□□□□ 0.53
CDKL1Q00532 ACAA1-209ENST00000450296 1570 ntTSL 5 BASIC18.35■□□□□ 0.53
CDKL1Q00532 RBP4-202ENST00000371467 1314 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
CDKL1Q00532 AK2-201ENST00000354858 1021 ntAPPRIS P4 TSL 1 (best) BASIC18.35■□□□□ 0.53
CDKL1Q00532 MIR718-201ENST00000390190 70 ntBASIC18.35■□□□□ 0.53
CDKL1Q00532 AC091153.3-201ENST00000497885 472 ntTSL 2 BASIC18.35■□□□□ 0.53
CDKL1Q00532 TMEM9B-203ENST00000528117 949 ntTSL 2 BASIC18.35■□□□□ 0.53
CDKL1Q00532 AC004803.1-203ENST00000539259 501 ntTSL 2 BASIC18.35■□□□□ 0.53
CDKL1Q00532 DDN-AS1-201ENST00000547395 858 ntTSL 2 BASIC18.35■□□□□ 0.53
CDKL1Q00532 MIEF2-207ENST00000578621 540 ntTSL 4 BASIC18.35■□□□□ 0.53
CDKL1Q00532 ZNF200-202ENST00000396870 2373 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
CDKL1Q00532 SEPT8-216ENST00000620483 4335 ntTSL 5 BASIC18.35■□□□□ 0.53
CDKL1Q00532 GPATCH3-201ENST00000361720 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CDKL1Q00532 GPR83-202ENST00000539203 1909 ntTSL 5 BASIC18.35■□□□□ 0.53
CDKL1Q00532 ASIC3-202ENST00000349064 1895 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CDKL1Q00532 AP005717.1-201ENST00000500705 1899 ntTSL 5 BASIC18.35■□□□□ 0.53
CDKL1Q00532 SH2B3-201ENST00000341259 5406 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CDKL1Q00532 CDC14B-208ENST00000463569 1734 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
CDKL1Q00532 LINC00466-207ENST00000634725 1736 ntTSL 5 BASIC18.35■□□□□ 0.53
CDKL1Q00532 GTF2H4-202ENST00000376316 1673 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
CDKL1Q00532 MINOS1-NBL1-204ENST00000602662 1623 ntAPPRIS P1 TSL 2 BASIC18.34■□□□□ 0.53
CDKL1Q00532 PRODH-215ENST00000610940 2405 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
CDKL1Q00532 SH3BP2-202ENST00000435136 2318 ntAPPRIS P3 TSL 2 BASIC18.34■□□□□ 0.53
CDKL1Q00532 SAMD11-212ENST00000617307 2314 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
CDKL1Q00532 MTMR9LP-203ENST00000426597 1545 ntBASIC18.34■□□□□ 0.53
CDKL1Q00532 KRT81-202ENST00000615839 1505 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
CDKL1Q00532 AGO4-201ENST00000373210 7116 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CDKL1Q00532 ASB7-203ENST00000558747 2133 ntTSL 5 BASIC18.34■□□□□ 0.53
CDKL1Q00532 PANX1-201ENST00000227638 2769 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
CDKL1Q00532 SYT15-205ENST00000503753 1331 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
CDKL1Q00532 WDR74-201ENST00000278856 1289 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CDKL1Q00532 MSGN1-201ENST00000281047 606 ntAPPRIS P1 BASIC18.34■□□□□ 0.53
CDKL1Q00532 NTAN1-201ENST00000287706 1204 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CDKL1Q00532 CXCL3-201ENST00000296026 1075 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CDKL1Q00532 FAM26F-202ENST00000368605 1117 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
CDKL1Q00532 NKAIN4-201ENST00000370307 793 ntTSL 5 BASIC18.34■□□□□ 0.53
CDKL1Q00532 TRPT1-203ENST00000394547 865 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
CDKL1Q00532 AL355355.2-201ENST00000442321 338 ntBASIC18.34■□□□□ 0.53
CDKL1Q00532 CA15P1-201ENST00000481698 905 ntBASIC18.34■□□□□ 0.53
CDKL1Q00532 FAM86C2P-201ENST00000525180 435 ntTSL 4 BASIC18.34■□□□□ 0.53
CDKL1Q00532 AP002433.1-201ENST00000525548 964 ntTSL 3 BASIC18.34■□□□□ 0.53
CDKL1Q00532 AC005786.3-201ENST00000589360 565 ntTSL 3 BASIC18.34■□□□□ 0.53
CDKL1Q00532 AC026471.5-201ENST00000615068 467 ntBASIC18.34■□□□□ 0.53
CDKL1Q00532 REXO1L10P-201ENST00000615707 1290 ntBASIC18.34■□□□□ 0.53
CDKL1Q00532 REXO1L12P-201ENST00000622156 912 ntBASIC18.34■□□□□ 0.53
CDKL1Q00532 DECR2-212ENST00000627716 352 ntTSL 2 BASIC18.34■□□□□ 0.53
CDKL1Q00532 PSTPIP1-203ENST00000558012 1896 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
CDKL1Q00532 KCNS2-201ENST00000287042 5219 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CDKL1Q00532 MAN1B1-207ENST00000535144 2296 ntTSL 2 BASIC18.34■□□□□ 0.53
CDKL1Q00532 GSEC-201ENST00000626810 2289 ntTSL 2 BASIC18.34■□□□□ 0.53
CDKL1Q00532 TNFSF9-201ENST00000245817 1665 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CDKL1Q00532 NFYC-AS1-201ENST00000606277 1687 ntBASIC18.34■□□□□ 0.53
CDKL1Q00532 ANKRD13D-201ENST00000308440 2219 ntTSL 2 BASIC18.34■□□□□ 0.53
CDKL1Q00532 MATN4-203ENST00000372754 2200 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
CDKL1Q00532 STX3-201ENST00000337979 3299 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CDKL1Q00532 SERPINE2-201ENST00000258405 2195 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
CDKL1Q00532 FAM213B-202ENST00000378425 2665 ntAPPRIS ALT2 TSL 2 BASIC18.34■□□□□ 0.53
CDKL1Q00532 ARPIN-202ENST00000460685 2145 ntTSL 2 BASIC18.34■□□□□ 0.53
CDKL1Q00532 NUP50-AS1-201ENST00000426282 2076 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
CDKL1Q00532 PER3-203ENST00000377541 1524 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
CDKL1Q00532 MAFF-201ENST00000338483 2490 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
CDKL1Q00532 DISP3-202ENST00000304391 1495 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
CDKL1Q00532 OGFOD2-222ENST00000545317 1481 ntTSL 2 BASIC18.33■□□□□ 0.53
CDKL1Q00532 HAUS4-217ENST00000555367 1454 ntTSL 5 BASIC18.33■□□□□ 0.53
CDKL1Q00532 AP2M1-201ENST00000292807 1931 ntAPPRIS P4 TSL 5 BASIC18.33■□□□□ 0.53
CDKL1Q00532 FAM234A-203ENST00000399932 3213 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
CDKL1Q00532 SH3GLB2-202ENST00000372559 1365 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
CDKL1Q00532 MTMR12-201ENST00000264934 2215 ntTSL 2 BASIC18.33■□□□□ 0.53
CDKL1Q00532 RBCK1-203ENST00000382181 2208 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
CDKL1Q00532 KCNH2-203ENST00000430723 2648 ntTSL 5 BASIC18.33■□□□□ 0.53
CDKL1Q00532 MRPL3-201ENST00000264995 1706 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
CDKL1Q00532 RGS3-231ENST00000613049 1726 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
CDKL1Q00532 SYNGR1-201ENST00000216155 497 ntTSL 3 BASIC18.33■□□□□ 0.52
CDKL1Q00532 LGALS7-201ENST00000378626 466 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
CDKL1Q00532 USP46-AS1-201ENST00000503051 1048 ntTSL 3 BASIC18.33■□□□□ 0.52
CDKL1Q00532 AC008550.1-201ENST00000511500 884 ntBASIC18.33■□□□□ 0.52
CDKL1Q00532 PAIP2-208ENST00000511706 468 ntTSL 5 BASIC18.33■□□□□ 0.52
CDKL1Q00532 TNFRSF12A-206ENST00000575124 1133 ntTSL 2 BASIC18.33■□□□□ 0.52
CDKL1Q00532 ANKRD9-201ENST00000286918 6727 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
CDKL1Q00532 SNAI3-AS1-205ENST00000568633 2096 ntBASIC18.33■□□□□ 0.52
CDKL1Q00532 TNFRSF19-202ENST00000382258 1625 ntAPPRIS P4 TSL 1 (best) BASIC18.33■□□□□ 0.52
CDKL1Q00532 APBB1-210ENST00000530885 1626 ntTSL 2 BASIC18.33■□□□□ 0.52
CDKL1Q00532 FAM131A-202ENST00000340957 2421 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
CDKL1Q00532 AEBP2-201ENST00000266508 3620 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
CDKL1Q00532 TFEB-201ENST00000230323 2354 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
CDKL1Q00532 BSG-201ENST00000333511 1974 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
CDKL1Q00532 LLGL2-203ENST00000392550 3509 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.52
CDKL1Q00532 PNMA8B-202ENST00000599531 5308 ntAPPRIS P1 BASIC18.33■□□□□ 0.52
CDKL1Q00532 SLC47A2-201ENST00000325411 2258 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.52
CDKL1Q00532 ENTPD8-202ENST00000371506 2222 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.52
CDKL1Q00532 KRT13-208ENST00000587544 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
CDKL1Q00532 SEPT8-201ENST00000296873 4394 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.52
CDKL1Q00532 CYP2D6-201ENST00000359033 1433 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
CDKL1Q00532 NPEPL1-203ENST00000525817 1780 ntTSL 2 BASIC18.32■□□□□ 0.52
CDKL1Q00532 AC020763.4-201ENST00000623414 4170 ntBASIC18.32■□□□□ 0.52
CDKL1Q00532 PTP4A3-202ENST00000349124 2710 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
CDKL1Q00532 TYMS-203ENST00000323274 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CDKL1Q00532 MATN4-201ENST00000353917 1657 ntTSL 5 BASIC18.32■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 20.8 ms