Protein–RNA interactions for Protein: P61619

SEC61A1, Protein transport protein Sec61 subunit alpha isoform 1, humanhuman

Known RBP Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A1P61619 PNCK-201ENST00000340888 1508 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.2
SEC61A1P61619 PPM1D-204ENST00000629650 1525 ntTSL 5 BASIC16.33■□□□□ 0.2
SEC61A1P61619 TMEM110-201ENST00000355083 4769 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
SEC61A1P61619 VPS26A-202ENST00000373382 3229 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.2
SEC61A1P61619 AC106820.2-201ENST00000563775 3264 ntBASIC16.33■□□□□ 0.2
SEC61A1P61619 WBP2-213ENST00000590221 1745 ntAPPRIS ALT1 TSL 3 BASIC16.33■□□□□ 0.2
SEC61A1P61619 SYTL1-210ENST00000616558 1878 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
SEC61A1P61619 ORC5-201ENST00000297431 1958 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
SEC61A1P61619 MGLL-204ENST00000434178 4941 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
SEC61A1P61619 GAB1-201ENST00000262994 2648 ntAPPRIS ALT1 TSL 1 (best) BASIC16.32■□□□□ 0.2
SEC61A1P61619 IFFO1-202ENST00000356896 2680 ntTSL 5 BASIC16.32■□□□□ 0.2
SEC61A1P61619 PTP4A3-202ENST00000349124 2710 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
SEC61A1P61619 SH2D3C-203ENST00000373277 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
SEC61A1P61619 PMS1-206ENST00000418224 3018 ntTSL 5 BASIC16.32■□□□□ 0.2
SEC61A1P61619 E2F2-201ENST00000361729 5191 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
SEC61A1P61619 SARDH-201ENST00000298628 1484 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
SEC61A1P61619 TMEM70-201ENST00000312184 2018 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
SEC61A1P61619 EIF3B-201ENST00000360876 3055 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
SEC61A1P61619 GPR20-201ENST00000377741 1515 ntAPPRIS P1 TSL 3 BASIC16.32■□□□□ 0.2
SEC61A1P61619 POLR1D-203ENST00000399697 2036 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
SEC61A1P61619 TUBA3FP-202ENST00000422086 1974 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
SEC61A1P61619 AL390719.1-201ENST00000427998 977 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
SEC61A1P61619 OPN5-204ENST00000489301 1931 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
SEC61A1P61619 MFSD4A-206ENST00000489709 1136 ntTSL 5 BASIC16.32■□□□□ 0.2
SEC61A1P61619 AP002982.1-201ENST00000492365 877 ntBASIC16.32■□□□□ 0.2
SEC61A1P61619 SNX14-210ENST00000505648 3193 ntTSL 2 BASIC16.32■□□□□ 0.2
SEC61A1P61619 DHDH-203ENST00000522614 776 ntTSL 5 BASIC16.32■□□□□ 0.2
SEC61A1P61619 SLC52A2-209ENST00000530047 1757 ntAPPRIS P1 TSL 2 BASIC16.32■□□□□ 0.2
SEC61A1P61619 LINC02361-201ENST00000538731 1484 ntTSL 2 BASIC16.32■□□□□ 0.2
SEC61A1P61619 RNASEK-202ENST00000548577 810 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
SEC61A1P61619 LRP1-204ENST00000553277 1693 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
SEC61A1P61619 PIF1-205ENST00000559239 2677 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
SEC61A1P61619 GRAP-204ENST00000573099 846 ntTSL 3 BASIC16.32■□□□□ 0.2
SEC61A1P61619 CD177P1-201ENST00000606252 935 ntBASIC16.32■□□□□ 0.2
SEC61A1P61619 CD177-203ENST00000618265 2222 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
SEC61A1P61619 ADPGK-AS1-201ENST00000563592 2730 ntTSL 2 BASIC16.32■□□□□ 0.2
SEC61A1P61619 LRP4-201ENST00000378623 8076 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
SEC61A1P61619 MTMR12-201ENST00000264934 2215 ntTSL 2 BASIC16.31■□□□□ 0.2
SEC61A1P61619 PRELID3A-209ENST00000592149 2001 ntTSL 2 BASIC16.31■□□□□ 0.2
SEC61A1P61619 SMTN-204ENST00000404574 1735 ntTSL 2 BASIC16.31■□□□□ 0.2
SEC61A1P61619 FDXR-203ENST00000420580 1705 ntTSL 2 BASIC16.31■□□□□ 0.2
SEC61A1P61619 FAM131C-201ENST00000375662 1695 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
SEC61A1P61619 GAL3ST4-204ENST00000423751 1695 ntTSL 3 BASIC16.31■□□□□ 0.2
SEC61A1P61619 GOLGA6L3-201ENST00000507199 1679 ntBASIC16.31■□□□□ 0.2
SEC61A1P61619 KLHL21-202ENST00000377663 6445 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
SEC61A1P61619 HSPB2-C11orf52-202ENST00000534100 1521 ntAPPRIS ALT2 TSL 2 BASIC16.31■□□□□ 0.2
SEC61A1P61619 PYGL-201ENST00000216392 3048 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
SEC61A1P61619 HPGD-213ENST00000541923 2920 ntTSL 2 BASIC16.31■□□□□ 0.2
SEC61A1P61619 FAM99A-201ENST00000382167 1432 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
SEC61A1P61619 BACE1-204ENST00000445823 1408 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
SEC61A1P61619 CCAR2-214ENST00000613179 1421 ntTSL 5 BASIC16.31■□□□□ 0.2
SEC61A1P61619 RNASEH2C-203ENST00000528220 1337 ntTSL 2 BASIC16.31■□□□□ 0.2
SEC61A1P61619 TXNL1-211ENST00000590954 1339 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
SEC61A1P61619 TSPY8-201ENST00000287721 1161 ntAPPRIS P5 TSL 1 (best) BASIC16.31■□□□□ 0.2
SEC61A1P61619 RTL8A-201ENST00000370775 1244 ntAPPRIS P1 BASIC16.31■□□□□ 0.2
SEC61A1P61619 AL353807.1-201ENST00000427475 662 ntBASIC16.31■□□□□ 0.2
SEC61A1P61619 TSPY10-201ENST00000428845 1161 ntAPPRIS P5 TSL 1 (best) BASIC16.31■□□□□ 0.2
SEC61A1P61619 DYNLT3-203ENST00000432389 719 ntTSL 5 BASIC16.31■□□□□ 0.2
SEC61A1P61619 TSPY3-203ENST00000457222 1161 ntAPPRIS P5 TSL 1 (best) BASIC16.31■□□□□ 0.2
SEC61A1P61619 AC016065.1-203ENST00000523225 1017 ntTSL 3 BASIC16.31■□□□□ 0.2
SEC61A1P61619 MIEF2-207ENST00000578621 540 ntTSL 4 BASIC16.31■□□□□ 0.2
SEC61A1P61619 CPEB3-203ENST00000614585 5789 ntAPPRIS P3 TSL 5 BASIC16.31■□□□□ 0.2
SEC61A1P61619 CPZ-202ENST00000360986 2267 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
SEC61A1P61619 FPGS-201ENST00000373225 2278 ntTSL 2 BASIC16.31■□□□□ 0.2
SEC61A1P61619 SEMA3B-209ENST00000456560 2221 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
SEC61A1P61619 ARHGEF28-212ENST00000513042 6273 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
SEC61A1P61619 KLF3-201ENST00000261438 5122 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
SEC61A1P61619 LANCL3-201ENST00000378619 3063 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
SEC61A1P61619 CARNS1-202ENST00000445895 3971 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
SEC61A1P61619 FIGNL2-202ENST00000618634 4812 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
SEC61A1P61619 SETD3-202ENST00000331768 2878 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
SEC61A1P61619 MEN1-205ENST00000377316 2868 ntTSL 5 BASIC16.31■□□□□ 0.2
SEC61A1P61619 FAM3A-201ENST00000322269 1815 ntTSL 5 BASIC16.31■□□□□ 0.2
SEC61A1P61619 ARNTL-205ENST00000403510 2745 ntTSL 2 BASIC16.31■□□□□ 0.2
SEC61A1P61619 RAB40C-205ENST00000539661 2609 ntAPPRIS P1 TSL 3 BASIC16.31■□□□□ 0.2
SEC61A1P61619 ZNF211-203ENST00000299871 2577 ntAPPRIS ALT2 TSL 3 BASIC16.31■□□□□ 0.2
SEC61A1P61619 SPAST-202ENST00000345662 5116 ntAPPRIS ALT1 TSL 1 (best) BASIC16.31■□□□□ 0.2
SEC61A1P61619 INPP5J-207ENST00000405300 2515 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
SEC61A1P61619 MMD2-202ENST00000404774 2415 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
SEC61A1P61619 RNF166-203ENST00000541206 2419 ntTSL 2 BASIC16.3■□□□□ 0.2
SEC61A1P61619 MRPL2-202ENST00000388752 1588 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
SEC61A1P61619 UBE2Q2-204ENST00000561851 1582 ntTSL 2 BASIC16.3■□□□□ 0.2
SEC61A1P61619 AP003774.1-201ENST00000316124 2340 ntTSL 2 BASIC16.3■□□□□ 0.2
SEC61A1P61619 ISLR2-202ENST00000419208 2306 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
SEC61A1P61619 AC067852.2-201ENST00000590513 2313 ntBASIC16.3■□□□□ 0.2
SEC61A1P61619 OR6D1P-202ENST00000641007 5290 ntBASIC16.3■□□□□ 0.2
SEC61A1P61619 UBE3A-201ENST00000232165 5051 ntAPPRIS P3 TSL 5 BASIC16.3■□□□□ 0.2
SEC61A1P61619 KIAA1324L-207ENST00000444627 3527 ntTSL 5 BASIC16.3■□□□□ 0.2
SEC61A1P61619 MAEA-201ENST00000264750 2058 ntTSL 2 BASIC16.3■□□□□ 0.2
SEC61A1P61619 EIF2B5-201ENST00000273783 2655 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
SEC61A1P61619 TCTEX1D2-201ENST00000325318 673 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
SEC61A1P61619 HDAC11-205ENST00000404548 577 ntTSL 4 BASIC16.3■□□□□ 0.2
SEC61A1P61619 LTB-210ENST00000429299 897 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
SEC61A1P61619 YBX1P10-201ENST00000444752 975 ntBASIC16.3■□□□□ 0.2
SEC61A1P61619 WDR86-AS1-203ENST00000480632 704 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
SEC61A1P61619 AF131216.3-201ENST00000525867 1099 ntTSL 2 BASIC16.3■□□□□ 0.2
SEC61A1P61619 C12orf76-208ENST00000551185 496 ntTSL 2 BASIC16.3■□□□□ 0.2
SEC61A1P61619 HLX-AS1-201ENST00000552026 563 ntTSL 4 BASIC16.3■□□□□ 0.2
SEC61A1P61619 AL355075.4-201ENST00000554988 638 ntBASIC16.3■□□□□ 0.2
SEC61A1P61619 EIF2AK4-209ENST00000560648 687 ntTSL 3 BASIC16.3■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 23.9 ms