Protein–RNA interactions for Protein: P61077

UBE2D3, Ubiquitin-conjugating enzyme E2 D3, humanhuman

Predictions only

Length 147 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3P61077 PCGF3-208ENST00000470161 1652 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
UBE2D3P61077 KIFC3-203ENST00000445690 3379 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
UBE2D3P61077 FPGS-201ENST00000373225 2278 ntTSL 2 BASIC13.28□□□□□ -0.28
UBE2D3P61077 DTNB-209ENST00000407038 2294 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
UBE2D3P61077 MAN1B1-207ENST00000535144 2296 ntTSL 2 BASIC13.28□□□□□ -0.28
UBE2D3P61077 NUDT9-201ENST00000302174 1701 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
UBE2D3P61077 TMEM235-203ENST00000550981 1786 ntTSL 2 BASIC13.28□□□□□ -0.28
UBE2D3P61077 PRR5-201ENST00000006251 1767 ntTSL 2 BASIC13.28□□□□□ -0.28
UBE2D3P61077 RTN4-204ENST00000357732 2390 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
UBE2D3P61077 ARHGAP22-203ENST00000374172 2380 ntTSL 2 BASIC13.28□□□□□ -0.28
UBE2D3P61077 PRR23B-201ENST00000329447 1896 ntAPPRIS P1 BASIC13.28□□□□□ -0.28
UBE2D3P61077 ASIC3-202ENST00000349064 1895 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
UBE2D3P61077 ARRB1-201ENST00000360025 1895 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
UBE2D3P61077 CRTC1-201ENST00000321949 2501 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
UBE2D3P61077 MAPKAPK3-201ENST00000357955 2500 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
UBE2D3P61077 TBL2-201ENST00000305632 3161 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
UBE2D3P61077 PTMS-201ENST00000309083 1139 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
UBE2D3P61077 PRSS57-201ENST00000329267 1025 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
UBE2D3P61077 NDUFA8-201ENST00000373768 844 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
UBE2D3P61077 GTF2A2-203ENST00000396061 758 ntAPPRIS P1 TSL 2 BASIC13.28□□□□□ -0.28
UBE2D3P61077 YWHAZ-209ENST00000419477 891 ntAPPRIS P1 TSL 3 BASIC13.28□□□□□ -0.28
UBE2D3P61077 NME6-209ENST00000442597 757 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
UBE2D3P61077 MIR1302-2HG-202ENST00000473358 712 ntTSL 5 BASIC13.28□□□□□ -0.28
UBE2D3P61077 MFSD4A-206ENST00000489709 1136 ntTSL 5 BASIC13.28□□□□□ -0.28
UBE2D3P61077 LINC00636-201ENST00000494231 1264 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
UBE2D3P61077 Z85996.1-201ENST00000494644 937 ntBASIC13.28□□□□□ -0.28
UBE2D3P61077 THAP6-213ENST00000514480 1161 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
UBE2D3P61077 LY6E-205ENST00000519611 635 ntTSL 3 BASIC13.28□□□□□ -0.28
UBE2D3P61077 LY6E-212ENST00000522024 868 ntAPPRIS P2 TSL 5 BASIC13.28□□□□□ -0.28
UBE2D3P61077 AC140725.1-202ENST00000561145 712 ntTSL 5 BASIC13.28□□□□□ -0.28
UBE2D3P61077 PRSS57-202ENST00000613411 1090 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
UBE2D3P61077 AC018445.1-201ENST00000621571 568 ntTSL 4 BASIC13.28□□□□□ -0.28
UBE2D3P61077 CROCCP4-202ENST00000633627 573 ntTSL 3 BASIC13.28□□□□□ -0.28
UBE2D3P61077 BSG-201ENST00000333511 1974 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
UBE2D3P61077 FUCA1-201ENST00000374479 2047 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
UBE2D3P61077 MFSD11-220ENST00000621483 2850 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
UBE2D3P61077 ZBTB4-201ENST00000311403 5956 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
UBE2D3P61077 ARHGEF19-201ENST00000270747 3029 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
UBE2D3P61077 CACNA1A-253ENST00000637927 6847 ntAPPRIS ALT2 TSL 5 BASIC13.28□□□□□ -0.28
UBE2D3P61077 KIAA1522-204ENST00000401073 5438 ntAPPRIS P3 TSL 2 BASIC13.28□□□□□ -0.28
UBE2D3P61077 RHBDL1-201ENST00000219551 1560 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
UBE2D3P61077 RABL2B-205ENST00000395595 2428 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
UBE2D3P61077 DIO1-201ENST00000322679 1658 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
UBE2D3P61077 DIO1-217ENST00000617230 1656 ntTSL 5 BASIC13.28□□□□□ -0.28
UBE2D3P61077 LINC01215-201ENST00000607746 2592 ntTSL 3 BASIC13.27□□□□□ -0.28
UBE2D3P61077 AC011270.2-201ENST00000624293 2550 ntBASIC13.27□□□□□ -0.28
UBE2D3P61077 RGS3-231ENST00000613049 1726 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
UBE2D3P61077 FAM228A-201ENST00000295150 1774 ntAPPRIS P2 TSL 1 (best) BASIC13.27□□□□□ -0.28
UBE2D3P61077 CCNA1-202ENST00000440264 1758 ntAPPRIS P1 TSL 2 BASIC13.27□□□□□ -0.28
UBE2D3P61077 EFTUD1P1-204ENST00000560401 1798 ntBASIC13.27□□□□□ -0.28
UBE2D3P61077 CELF2-217ENST00000638035 1849 ntAPPRIS P3 TSL 5 BASIC13.27□□□□□ -0.28
UBE2D3P61077 SOCS2-212ENST00000622746 2881 ntAPPRIS P1 TSL 3 BASIC13.27□□□□□ -0.28
UBE2D3P61077 SIL1-202ENST00000394817 1923 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
UBE2D3P61077 AC090340.1-201ENST00000620778 4980 ntBASIC13.27□□□□□ -0.28
UBE2D3P61077 NMRK1-203ENST00000376811 2050 ntTSL 2 BASIC13.27□□□□□ -0.28
UBE2D3P61077 MXRA8-202ENST00000342753 2231 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
UBE2D3P61077 ALDH5A1-201ENST00000348925 2266 ntAPPRIS P4 TSL 1 (best) BASIC13.27□□□□□ -0.28
UBE2D3P61077 CBX2-202ENST00000310942 4644 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
UBE2D3P61077 CCDC137-201ENST00000329214 2468 ntAPPRIS P2 TSL 1 (best) BASIC13.27□□□□□ -0.29
UBE2D3P61077 OLFM1-202ENST00000277415 1014 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
UBE2D3P61077 C7orf50-201ENST00000357429 1294 ntAPPRIS P2 TSL 1 (best) BASIC13.27□□□□□ -0.29
UBE2D3P61077 MPV17L-202ENST00000396385 1037 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
UBE2D3P61077 SERF2-207ENST00000409614 582 ntTSL 2 BASIC13.27□□□□□ -0.29
UBE2D3P61077 NELFE-206ENST00000444811 1202 ntAPPRIS ALT2 TSL 2 BASIC13.27□□□□□ -0.29
UBE2D3P61077 TMEM9-209ENST00000485839 938 ntAPPRIS P3 TSL 2 BASIC13.27□□□□□ -0.29
UBE2D3P61077 RPS23-206ENST00000510210 1058 ntTSL 2 BASIC13.27□□□□□ -0.29
UBE2D3P61077 AP003501.2-201ENST00000524433 477 ntTSL 4 BASIC13.27□□□□□ -0.29
UBE2D3P61077 SIVA1-203ENST00000535554 1244 ntAPPRIS ALT1 TSL 2 BASIC13.27□□□□□ -0.29
UBE2D3P61077 KRT18P6-201ENST00000555540 1265 ntBASIC13.27□□□□□ -0.29
UBE2D3P61077 AC009052.1-201ENST00000567090 298 ntTSL 3 BASIC13.27□□□□□ -0.29
UBE2D3P61077 AL445675.2-201ENST00000620291 557 ntBASIC13.27□□□□□ -0.29
UBE2D3P61077 AEBP1-206ENST00000450684 2571 ntTSL 2 BASIC13.27□□□□□ -0.29
UBE2D3P61077 RABGAP1L-204ENST00000357444 2605 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
UBE2D3P61077 TNFAIP2-201ENST00000333007 4175 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
UBE2D3P61077 TJP3-201ENST00000539908 2897 ntAPPRIS ALT2 TSL 2 BASIC13.27□□□□□ -0.29
UBE2D3P61077 AL162311.3-201ENST00000555918 2867 ntTSL 2 BASIC13.27□□□□□ -0.29
UBE2D3P61077 SERGEF-201ENST00000265965 1566 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
UBE2D3P61077 UBE2E3-209ENST00000602710 1556 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
UBE2D3P61077 GTF2H4-202ENST00000376316 1673 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.29
UBE2D3P61077 SAMD11-216ENST00000620200 1874 ntTSL 5 BASIC13.27□□□□□ -0.29
UBE2D3P61077 AD000671.2-201ENST00000589807 1925 ntAPPRIS P1 TSL 2 BASIC13.27□□□□□ -0.29
UBE2D3P61077 SLC47A2-201ENST00000325411 2258 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.29
UBE2D3P61077 KRT6A-201ENST00000330722 2310 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
UBE2D3P61077 ZNF500-202ENST00000545009 2440 ntTSL 2 BASIC13.27□□□□□ -0.29
UBE2D3P61077 TTLL8-201ENST00000266182 2505 ntAPPRIS ALT2 TSL 5 BASIC13.27□□□□□ -0.29
UBE2D3P61077 FARP1-242ENST00000627049 5103 ntTSL 5 BASIC13.27□□□□□ -0.29
UBE2D3P61077 SREBF2-201ENST00000361204 5240 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
UBE2D3P61077 TRIM33-201ENST00000358465 8339 ntAPPRIS P4 TSL 1 (best) BASIC13.26□□□□□ -0.29
UBE2D3P61077 UBE2Q2-201ENST00000267938 3130 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
UBE2D3P61077 LRRC56-201ENST00000270115 2769 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
UBE2D3P61077 RNF139-201ENST00000303545 2637 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
UBE2D3P61077 LRRC36-201ENST00000329956 2395 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
UBE2D3P61077 C15orf48-201ENST00000344300 875 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
UBE2D3P61077 MFSD10-202ENST00000355443 1753 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
UBE2D3P61077 FAM222A-201ENST00000358906 2731 ntAPPRIS P1 TSL 5 BASIC13.26□□□□□ -0.29
UBE2D3P61077 DPYSL3-202ENST00000398514 5309 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
UBE2D3P61077 ESRRAP1-201ENST00000400596 1257 ntBASIC13.26□□□□□ -0.29
UBE2D3P61077 FBXL5-202ENST00000412094 2837 ntAPPRIS ALT1 TSL 1 (best) BASIC13.26□□□□□ -0.29
UBE2D3P61077 NAA60-204ENST00000421765 1045 ntTSL 2 BASIC13.26□□□□□ -0.29
UBE2D3P61077 POU5F1P3-201ENST00000428824 1078 ntBASIC13.26□□□□□ -0.29
Retrieved 100 of 98,524 protein–RNA pairs in 25.5 ms