Protein–RNA interactions for Protein: P56747

CLDN6, Claudin-6, humanhuman

Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN6P56747 SATB1-AS1-201ENST00000414198 737 ntTSL 2 BASIC17.89■□□□□ 0.45
CLDN6P56747 SEC61G-203ENST00000415949 732 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.45
CLDN6P56747 BET1L-206ENST00000486280 665 ntTSL 3 BASIC17.89■□□□□ 0.45
CLDN6P56747 ABR-204ENST00000543210 1049 ntTSL 2 BASIC17.89■□□□□ 0.45
CLDN6P56747 SAXO2-206ENST00000566205 340 ntAPPRIS ALT2 TSL 2 BASIC17.89■□□□□ 0.45
CLDN6P56747 AC139530.3-201ENST00000620344 690 ntBASIC17.89■□□□□ 0.45
CLDN6P56747 TRMU-201ENST00000290846 1940 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
CLDN6P56747 CTNNBL1-201ENST00000361383 1925 ntAPPRIS P2 TSL 1 (best) BASIC17.89■□□□□ 0.45
CLDN6P56747 AUTS2-201ENST00000342771 6173 ntAPPRIS P3 TSL 1 (best) BASIC17.89■□□□□ 0.45
CLDN6P56747 TMEM91-210ENST00000542945 1610 ntTSL 2 BASIC17.89■□□□□ 0.45
CLDN6P56747 TRPV6-209ENST00000638686 2298 ntAPPRIS P2 TSL 1 (best) BASIC17.89■□□□□ 0.45
CLDN6P56747 MARCH9-201ENST00000266643 2982 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
CLDN6P56747 SSH3-202ENST00000308298 2046 ntTSL 2 BASIC17.89■□□□□ 0.45
CLDN6P56747 SYT7-206ENST00000540677 2013 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
CLDN6P56747 SPOCK3-204ENST00000502330 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
CLDN6P56747 MAP3K15-201ENST00000338883 4012 ntAPPRIS P1 TSL 5 BASIC17.88■□□□□ 0.45
CLDN6P56747 CXXC4-201ENST00000394767 5565 ntAPPRIS P1 TSL 5 BASIC17.88■□□□□ 0.45
CLDN6P56747 PITPNB-205ENST00000455418 2963 ntAPPRIS ALT1 TSL 5 BASIC17.88■□□□□ 0.45
CLDN6P56747 YTHDF3-214ENST00000621890 2296 ntTSL 5 BASIC17.88■□□□□ 0.45
CLDN6P56747 USP39-204ENST00000409766 2033 ntTSL 2 BASIC17.88■□□□□ 0.45
CLDN6P56747 SIGIRR-220ENST00000531205 1649 ntTSL 2 BASIC17.88■□□□□ 0.45
CLDN6P56747 YIPF2-201ENST00000253031 2087 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
CLDN6P56747 NDUFB9-201ENST00000276689 711 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
CLDN6P56747 BAALC-202ENST00000306391 243 ntTSL 5 BASIC17.88■□□□□ 0.45
CLDN6P56747 HDDC3-201ENST00000330334 1047 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
CLDN6P56747 BAALC-204ENST00000330955 222 ntTSL 5 BASIC17.88■□□□□ 0.45
CLDN6P56747 CMTM1-204ENST00000336328 606 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
CLDN6P56747 YWHAZ-204ENST00000395953 994 ntAPPRIS P1 TSL 5 BASIC17.88■□□□□ 0.45
CLDN6P56747 NUS1P2-201ENST00000417358 873 ntBASIC17.88■□□□□ 0.45
CLDN6P56747 AL137026.1-202ENST00000452578 1089 ntTSL 2 BASIC17.88■□□□□ 0.45
CLDN6P56747 MOK-208ENST00000519058 917 ntTSL 2 BASIC17.88■□□□□ 0.45
CLDN6P56747 ZNF706-206ENST00000519744 785 ntTSL 3 BASIC17.88■□□□□ 0.45
CLDN6P56747 SLC25A1P1-201ENST00000528351 927 ntBASIC17.88■□□□□ 0.45
CLDN6P56747 CMTM1-213ENST00000529506 581 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
CLDN6P56747 AL662844.1-201ENST00000546340 181 ntBASIC17.88■□□□□ 0.45
CLDN6P56747 GSTZ1-218ENST00000557053 580 ntTSL 3 BASIC17.88■□□□□ 0.45
CLDN6P56747 AP005901.3-202ENST00000581653 237 ntBASIC17.88■□□□□ 0.45
CLDN6P56747 MIR2117HG-201ENST00000588060 506 ntTSL 4 BASIC17.88■□□□□ 0.45
CLDN6P56747 PNMA8A-203ENST00000602246 572 ntAPPRIS ALT2 TSL 4 BASIC17.88■□□□□ 0.45
CLDN6P56747 IKBKG-207ENST00000611071 2103 ntAPPRIS P3 TSL 1 (best) BASIC17.88■□□□□ 0.45
CLDN6P56747 VPS51-217ENST00000639871 243 ntTSL 5 BASIC17.88■□□□□ 0.45
CLDN6P56747 TMSB4X-203ENST00000380636 1702 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
CLDN6P56747 KCNK4-207ENST00000539216 1723 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
CLDN6P56747 PBX1-222ENST00000627490 1769 ntTSL 2 BASIC17.88■□□□□ 0.45
CLDN6P56747 JMJD7-201ENST00000397299 1416 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
CLDN6P56747 SSX2IP-210ENST00000605755 1933 ntTSL 2 BASIC17.88■□□□□ 0.45
CLDN6P56747 C3orf70-201ENST00000335012 5901 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
CLDN6P56747 TP53RK-201ENST00000372102 2012 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
CLDN6P56747 LINC00634-201ENST00000381348 1510 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
CLDN6P56747 ERCC2-205ENST00000485403 1538 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
CLDN6P56747 TAF5L-201ENST00000258281 3112 ntAPPRIS P1 TSL 5 BASIC17.87■□□□□ 0.45
CLDN6P56747 KLHL29-203ENST00000486442 5287 ntAPPRIS P1 TSL 5 BASIC17.87■□□□□ 0.45
CLDN6P56747 KMT5B-201ENST00000304363 5837 ntAPPRIS P1 TSL 5 BASIC17.87■□□□□ 0.45
CLDN6P56747 SLC25A22-228ENST00000628067 2692 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
CLDN6P56747 CACNA1A-246ENST00000637736 8340 ntAPPRIS ALT2 TSL 5 BASIC17.87■□□□□ 0.45
CLDN6P56747 BTD-202ENST00000383778 2261 ntAPPRIS ALT2 TSL 2 BASIC17.87■□□□□ 0.45
CLDN6P56747 KRTAP5-AS1-201ENST00000424148 2265 ntTSL 2 BASIC17.87■□□□□ 0.45
CLDN6P56747 LIMS2-207ENST00000409808 2315 ntAPPRIS ALT1 TSL 5 BASIC17.87■□□□□ 0.45
CLDN6P56747 ULK1-201ENST00000321867 5310 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
CLDN6P56747 AL445183.2-201ENST00000439621 1871 ntTSL 2 BASIC17.87■□□□□ 0.45
CLDN6P56747 NEU4-202ENST00000391969 2526 ntAPPRIS P1 TSL 2 BASIC17.87■□□□□ 0.45
CLDN6P56747 SNRPA1-201ENST00000254193 1055 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
CLDN6P56747 CKLF-202ENST00000345436 571 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
CLDN6P56747 TEX30-205ENST00000376029 959 ntTSL 2 BASIC17.87■□□□□ 0.45
CLDN6P56747 FIGNL1-207ENST00000435566 593 ntTSL 4 BASIC17.87■□□□□ 0.45
CLDN6P56747 BOC-211ENST00000484034 1286 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
CLDN6P56747 PENK-208ENST00000523051 772 ntTSL 5 BASIC17.87■□□□□ 0.45
CLDN6P56747 EFCAB11-211ENST00000556609 568 ntTSL 3 BASIC17.87■□□□□ 0.45
CLDN6P56747 AC243965.1-201ENST00000557595 781 ntTSL 3 BASIC17.87■□□□□ 0.45
CLDN6P56747 PPP5C-202ENST00000391919 1929 ntTSL 5 BASIC17.87■□□□□ 0.45
CLDN6P56747 KLHL21-206ENST00000610898 1945 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
CLDN6P56747 PRELID3B-201ENST00000355937 2626 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
CLDN6P56747 TRIM36-202ENST00000379617 1322 ntTSL 2 BASIC17.87■□□□□ 0.45
CLDN6P56747 GBX2-203ENST00000551105 1307 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
CLDN6P56747 KLF2-201ENST00000248071 2018 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
CLDN6P56747 MYBL2-202ENST00000396863 2704 ntTSL 2 BASIC17.87■□□□□ 0.45
CLDN6P56747 CDK10-208ENST00000505473 1424 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
CLDN6P56747 P2RY6-207ENST00000538328 1425 ntAPPRIS P1 TSL 3 BASIC17.87■□□□□ 0.45
CLDN6P56747 CFC1-203ENST00000621673 1444 ntTSL 2 BASIC17.87■□□□□ 0.45
CLDN6P56747 TMPRSS5-212ENST00000545579 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
CLDN6P56747 ARHGAP11A-205ENST00000563864 2279 ntTSL 5 BASIC17.87■□□□□ 0.45
CLDN6P56747 LSR-214ENST00000621372 2274 ntAPPRIS P4 TSL 1 (best) BASIC17.87■□□□□ 0.45
CLDN6P56747 TH-202ENST00000333684 1535 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
CLDN6P56747 ITPKB-203ENST00000429204 6162 ntAPPRIS P1 TSL 5 BASIC17.87■□□□□ 0.45
CLDN6P56747 FSCN2-201ENST00000334850 1551 ntTSL 5 BASIC17.87■□□□□ 0.45
CLDN6P56747 PITHD1-201ENST00000246151 1603 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
CLDN6P56747 MTX1-202ENST00000368376 1632 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
CLDN6P56747 UBTD2-201ENST00000393792 3301 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
CLDN6P56747 MRPS5-201ENST00000272418 1652 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
CLDN6P56747 CDK4-202ENST00000312990 1650 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
CLDN6P56747 AC012615.6-201ENST00000593201 1697 ntTSL 2 BASIC17.87■□□□□ 0.45
CLDN6P56747 PMPCB-202ENST00000428154 1714 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
CLDN6P56747 RIMBP3B-201ENST00000620804 6105 ntAPPRIS P1 BASIC17.86■□□□□ 0.45
CLDN6P56747 MAP4K4-210ENST00000425019 4403 ntTSL 5 BASIC17.86■□□□□ 0.45
CLDN6P56747 TMEM104-202ENST00000417024 1781 ntTSL 2 BASIC17.86■□□□□ 0.45
CLDN6P56747 CDC25B-202ENST00000340833 1978 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
CLDN6P56747 LRRC4B-201ENST00000389201 2958 ntAPPRIS P1 TSL 2 BASIC17.86■□□□□ 0.45
CLDN6P56747 RAI14-201ENST00000265109 5092 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
CLDN6P56747 PWWP2AP1-201ENST00000429776 2273 ntBASIC17.86■□□□□ 0.45
CLDN6P56747 KMT5C-201ENST00000255613 2308 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 29.4 ms