Protein–RNA interactions for Protein: P56377

AP1S2, AP-1 complex subunit sigma-2, humanhuman

Predictions only

Length 157 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S2P56377 NPM3-201ENST00000370110 877 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
AP1S2P56377 FAM182B-202ENST00000376404 456 ntAPPRIS ALT2 BASIC18.15■□□□□ 0.5
AP1S2P56377 ERICH4-201ENST00000378187 946 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
AP1S2P56377 RNF144A-AS1-204ENST00000437589 618 ntTSL 2 BASIC18.15■□□□□ 0.5
AP1S2P56377 RPL29-202ENST00000466397 742 ntAPPRIS P1 TSL 2 BASIC18.15■□□□□ 0.5
AP1S2P56377 NDUFB10-202ENST00000543683 830 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
AP1S2P56377 AC079385.1-202ENST00000549203 569 ntTSL 4 BASIC18.15■□□□□ 0.5
AP1S2P56377 AC004448.5-201ENST00000579897 567 ntTSL 5 BASIC18.15■□□□□ 0.5
AP1S2P56377 AC020913.2-201ENST00000601929 629 ntTSL 5 BASIC18.15■□□□□ 0.5
AP1S2P56377 FFAR4-203ENST00000604414 1142 ntTSL 3 BASIC18.15■□□□□ 0.5
AP1S2P56377 TPSB2-201ENST00000606293 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
AP1S2P56377 SPINK2-206ENST00000618802 608 ntTSL 3 BASIC18.15■□□□□ 0.5
AP1S2P56377 RABL2B-205ENST00000395595 2428 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
AP1S2P56377 HLA-G-205ENST00000428701 1578 ntAPPRIS P2 BASIC18.15■□□□□ 0.5
AP1S2P56377 ASIC3-202ENST00000349064 1895 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
AP1S2P56377 DUS1L-202ENST00000354321 2151 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
AP1S2P56377 ICA1-206ENST00000402384 2458 ntAPPRIS P3 TSL 2 BASIC18.15■□□□□ 0.5
AP1S2P56377 ADAMTS19-201ENST00000274487 5234 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
AP1S2P56377 ADAP2-201ENST00000330889 2934 ntAPPRIS P2 TSL 1 (best) BASIC18.15■□□□□ 0.5
AP1S2P56377 CPSF3-201ENST00000238112 2345 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
AP1S2P56377 HOXA9-201ENST00000343483 2060 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
AP1S2P56377 CD164L2-202ENST00000374027 1457 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.5
AP1S2P56377 MEN1-202ENST00000315422 3148 ntAPPRIS ALT1 TSL 5 BASIC18.14■□□□□ 0.5
AP1S2P56377 PRDM8-202ENST00000415738 3124 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
AP1S2P56377 FDXR-214ENST00000581530 1827 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.5
AP1S2P56377 FKRP-202ENST00000391909 2801 ntAPPRIS P1 TSL 2 BASIC18.14■□□□□ 0.5
AP1S2P56377 AL499627.1-201ENST00000569373 2188 ntBASIC18.14■□□□□ 0.49
AP1S2P56377 SH3BP1-201ENST00000357436 2852 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
AP1S2P56377 EFEMP2-210ENST00000528176 1504 ntTSL 5 BASIC18.14■□□□□ 0.49
AP1S2P56377 PDLIM4-201ENST00000253754 2282 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
AP1S2P56377 HOXC10-201ENST00000303460 1936 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
AP1S2P56377 DLK1-202ENST00000341267 4722 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
AP1S2P56377 GAS2L1P2-202ENST00000442849 2262 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
AP1S2P56377 C5orf30-203ENST00000515669 1573 ntAPPRIS P1 TSL 3 BASIC18.14■□□□□ 0.49
AP1S2P56377 AP1AR-202ENST00000309703 2337 ntAPPRIS ALT1 TSL 1 (best) BASIC18.14■□□□□ 0.49
AP1S2P56377 MMP23A-201ENST00000234610 1017 ntBASIC18.14■□□□□ 0.49
AP1S2P56377 KRAS-201ENST00000256078 1119 ntAPPRIS P4 TSL 1 (best) BASIC18.14■□□□□ 0.49
AP1S2P56377 AQP12B-201ENST00000407834 1094 ntAPPRIS P2 TSL 1 (best) BASIC18.14■□□□□ 0.49
AP1S2P56377 AL596275.1-201ENST00000423464 877 ntBASIC18.14■□□□□ 0.49
AP1S2P56377 AC007663.1-201ENST00000438948 1240 ntBASIC18.14■□□□□ 0.49
AP1S2P56377 ELP6-205ENST00000439305 880 ntTSL 2 BASIC18.14■□□□□ 0.49
AP1S2P56377 PHB2-202ENST00000440277 996 ntTSL 5 BASIC18.14■□□□□ 0.49
AP1S2P56377 GXYLT1P6-201ENST00000456472 1187 ntBASIC18.14■□□□□ 0.49
AP1S2P56377 AC128688.1-201ENST00000487626 519 ntBASIC18.14■□□□□ 0.49
AP1S2P56377 LINC01184-202ENST00000501173 949 ntTSL 5 BASIC18.14■□□□□ 0.49
AP1S2P56377 WWOX-216ENST00000569818 525 ntBASIC18.14■□□□□ 0.49
AP1S2P56377 RAB11B-AS1-201ENST00000593581 1013 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
AP1S2P56377 SNAP47-201ENST00000315781 2367 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.49
AP1S2P56377 ANXA3-201ENST00000264908 1657 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
AP1S2P56377 KHNYN-206ENST00000556842 2443 ntAPPRIS P1 TSL 2 BASIC18.14■□□□□ 0.49
AP1S2P56377 MCOLN2-201ENST00000284027 1729 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.49
AP1S2P56377 NARFL-201ENST00000251588 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
AP1S2P56377 IFRD2-202ENST00000417626 2109 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
AP1S2P56377 COPS7A-215ENST00000543155 2127 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
AP1S2P56377 MUTYH-202ENST00000355498 1776 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
AP1S2P56377 SIKE1-201ENST00000060969 2190 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.49
AP1S2P56377 ATRIP-201ENST00000320211 2590 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
AP1S2P56377 IGFBP4-201ENST00000269593 2200 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
AP1S2P56377 SPSB1-201ENST00000328089 3120 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
AP1S2P56377 FLT1-201ENST00000282397 7092 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
AP1S2P56377 PHB2-203ENST00000535923 1515 ntAPPRIS P2 TSL 5 BASIC18.13■□□□□ 0.49
AP1S2P56377 BSG-201ENST00000333511 1974 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
AP1S2P56377 LRP8-204ENST00000371454 3322 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
AP1S2P56377 KLHL40-201ENST00000287777 2517 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
AP1S2P56377 USP25-204ENST00000400183 5341 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
AP1S2P56377 AC126763.1-201ENST00000552015 2118 ntBASIC18.13■□□□□ 0.49
AP1S2P56377 ZCCHC17-205ENST00000615916 1652 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
AP1S2P56377 SHANK1-202ENST00000359082 6459 ntTSL 5 BASIC18.13■□□□□ 0.49
AP1S2P56377 HYOU1-212ENST00000532519 2162 ntTSL 5 BASIC18.13■□□□□ 0.49
AP1S2P56377 TFCP2-205ENST00000549867 1727 ntTSL 5 BASIC18.13■□□□□ 0.49
AP1S2P56377 SLC9A6-201ENST00000370695 4725 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
AP1S2P56377 FBXO41-205ENST00000521871 7336 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
AP1S2P56377 ANKS3-202ENST00000446014 2265 ntTSL 5 BASIC18.13■□□□□ 0.49
AP1S2P56377 TRIM63-201ENST00000374272 1770 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
AP1S2P56377 LIN28B-AS1-203ENST00000636682 1797 ntTSL 3 BASIC18.13■□□□□ 0.49
AP1S2P56377 CLN8-211ENST00000636934 1790 ntTSL 5 BASIC18.13■□□□□ 0.49
AP1S2P56377 HCRT-201ENST00000293330 577 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
AP1S2P56377 CACYBP-202ENST00000405362 1059 ntTSL 5 BASIC18.13■□□□□ 0.49
AP1S2P56377 CHCHD10-202ENST00000484558 1171 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
AP1S2P56377 IKBKB-210ENST00000518983 447 ntTSL 2 BASIC18.13■□□□□ 0.49
AP1S2P56377 NAPSB-206ENST00000562112 1266 ntBASIC18.13■□□□□ 0.49
AP1S2P56377 METRN-204ENST00000568223 3325 ntAPPRIS P2 TSL 1 (best) BASIC18.13■□□□□ 0.49
AP1S2P56377 PKMYT1-203ENST00000431515 2308 ntTSL 2 BASIC18.13■□□□□ 0.49
AP1S2P56377 CYSTM1-201ENST00000261811 1336 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
AP1S2P56377 ASZ1-201ENST00000284629 1865 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
AP1S2P56377 NBL1-212ENST00000621723 2133 ntAPPRIS P3 TSL 2 BASIC18.13■□□□□ 0.49
AP1S2P56377 TSSC4-201ENST00000333256 1686 ntAPPRIS P3 TSL 1 (best) BASIC18.12■□□□□ 0.49
AP1S2P56377 PPP2R2C-206ENST00000507294 1667 ntTSL 2 BASIC18.12■□□□□ 0.49
AP1S2P56377 TRPC1-203ENST00000476941 3061 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
AP1S2P56377 AC009113.1-201ENST00000570267 2443 ntBASIC18.12■□□□□ 0.49
AP1S2P56377 PIP4K2A-202ENST00000376573 3802 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
AP1S2P56377 UMOD-201ENST00000302509 2477 ntAPPRIS P3 TSL 5 BASIC18.12■□□□□ 0.49
AP1S2P56377 IRF7-202ENST00000348655 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
AP1S2P56377 SPERT-202ENST00000378966 1842 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
AP1S2P56377 HCN2-201ENST00000251287 3408 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
AP1S2P56377 GUCA1A-205ENST00000541991 1921 ntTSL 5 BASIC18.12■□□□□ 0.49
AP1S2P56377 ATP6V0E2-203ENST00000456496 2722 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
AP1S2P56377 ATP6V0E2-213ENST00000615196 2727 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
AP1S2P56377 NCK1-207ENST00000481752 1971 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
AP1S2P56377 PDXK-219ENST00000621478 1967 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 24 ms