Protein–RNA interactions for Protein: P55290

CDH13, Cadherin-13, humanhuman

Predictions only

Length 713 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13P55290 RRP7BP-201ENST00000357802 2375 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
CDH13P55290 COBLL1-201ENST00000342193 4898 ntAPPRIS P3 TSL 1 (best) BASIC18.26■□□□□ 0.51
CDH13P55290 HTATSF1-204ENST00000535601 3019 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
CDH13P55290 SYNM-204ENST00000594047 6407 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
CDH13P55290 PPP2R2C-209ENST00000515571 1832 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
CDH13P55290 HPS3-202ENST00000460120 2745 ntTSL 2 BASIC18.26■□□□□ 0.51
CDH13P55290 PPP2R2B-203ENST00000394411 2071 ntAPPRIS P1 TSL 2 BASIC18.26■□□□□ 0.51
CDH13P55290 KRT16P1-201ENST00000399124 1418 ntBASIC18.26■□□□□ 0.51
CDH13P55290 RBM42-201ENST00000262633 1680 ntAPPRIS P2 TSL 1 (best) BASIC18.26■□□□□ 0.51
CDH13P55290 SLC25A51-202ENST00000377716 1691 ntAPPRIS P1 TSL 3 BASIC18.26■□□□□ 0.51
CDH13P55290 DMRT3-201ENST00000190165 2183 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
CDH13P55290 GNAZ-203ENST00000615612 3333 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
CDH13P55290 MAL-201ENST00000309988 1112 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
CDH13P55290 ARMC4P1-202ENST00000576034 643 ntTSL 2 BASIC18.26■□□□□ 0.51
CDH13P55290 PNMA8A-203ENST00000602246 572 ntAPPRIS ALT2 TSL 4 BASIC18.26■□□□□ 0.51
CDH13P55290 JADE2-211ENST00000612830 1251 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
CDH13P55290 MMD2-204ENST00000612910 778 ntTSL 5 BASIC18.26■□□□□ 0.51
CDH13P55290 AC011298.2-201ENST00000617989 482 ntBASIC18.26■□□□□ 0.51
CDH13P55290 KRT81-202ENST00000615839 1505 ntAPPRIS ALT2 TSL 5 BASIC18.26■□□□□ 0.51
CDH13P55290 FKBP8-206ENST00000596558 1756 ntAPPRIS ALT1 TSL 2 BASIC18.26■□□□□ 0.51
CDH13P55290 CADPS2-201ENST00000313070 6065 ntTSL 5 BASIC18.26■□□□□ 0.51
CDH13P55290 GPR75-201ENST00000394705 2115 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
CDH13P55290 PCCA-202ENST00000376285 2494 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
CDH13P55290 ATPAF1-214ENST00000576409 4158 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
CDH13P55290 LETM1P2-201ENST00000597330 2178 ntBASIC18.25■□□□□ 0.51
CDH13P55290 AGO4-201ENST00000373210 7116 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CDH13P55290 DHRS4-204ENST00000543741 1340 ntTSL 2 BASIC18.25■□□□□ 0.51
CDH13P55290 JAKMIP1-202ENST00000409021 2975 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
CDH13P55290 TADA3-201ENST00000301964 2355 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CDH13P55290 FAM99A-201ENST00000382167 1432 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
CDH13P55290 TTC22-201ENST00000371274 2149 ntTSL 2 BASIC18.25■□□□□ 0.51
CDH13P55290 PER3-203ENST00000377541 1524 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
CDH13P55290 ASZ1-201ENST00000284629 1865 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CDH13P55290 LTBP1-203ENST00000404816 6333 ntAPPRIS P4 TSL 5 BASIC18.25■□□□□ 0.51
CDH13P55290 HARBI1-201ENST00000326737 1967 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CDH13P55290 ASNS-206ENST00000437628 1638 ntTSL 2 BASIC18.25■□□□□ 0.51
CDH13P55290 HAUS4-218ENST00000555986 1626 ntTSL 5 BASIC18.25■□□□□ 0.51
CDH13P55290 IVNS1ABP-202ENST00000367498 4199 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CDH13P55290 FAM98C-201ENST00000252530 1271 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CDH13P55290 CHPF-202ENST00000373891 1079 ntTSL 2 BASIC18.25■□□□□ 0.51
CDH13P55290 PDCD2-202ENST00000392090 936 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
CDH13P55290 RTBDN-202ENST00000393233 1000 ntAPPRIS ALT2 TSL 3 BASIC18.25■□□□□ 0.51
CDH13P55290 STK24-AS1-201ENST00000434547 1278 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
CDH13P55290 CNOT8-224ENST00000523698 862 ntTSL 2 BASIC18.25■□□□□ 0.51
CDH13P55290 LINC01301-204ENST00000530725 577 ntTSL 4 BASIC18.25■□□□□ 0.51
CDH13P55290 ADGRD1-AS1-202ENST00000542980 1277 ntTSL 4 BASIC18.25■□□□□ 0.51
CDH13P55290 AC011445.1-201ENST00000601911 877 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
CDH13P55290 CD276-203ENST00000537340 2439 ntTSL 2 BASIC18.25■□□□□ 0.51
CDH13P55290 GPC2-201ENST00000292377 2532 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CDH13P55290 RNFT2-202ENST00000319176 2180 ntTSL 5 BASIC18.25■□□□□ 0.51
CDH13P55290 DCST1-204ENST00000423025 2199 ntAPPRIS ALT2 TSL 2 BASIC18.25■□□□□ 0.51
CDH13P55290 ZDHHC2-201ENST00000262096 6377 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CDH13P55290 MPP5-201ENST00000261681 5552 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CDH13P55290 EDEM1-201ENST00000256497 6146 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CDH13P55290 DNLZ-202ENST00000371739 2934 ntTSL 5 BASIC18.25■□□□□ 0.51
CDH13P55290 AL034417.2-201ENST00000445300 2044 ntTSL 2 BASIC18.25■□□□□ 0.51
CDH13P55290 GPATCH3-201ENST00000361720 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CDH13P55290 WWC1-201ENST00000265293 7130 ntAPPRIS P3 TSL 1 (best) BASIC18.25■□□□□ 0.51
CDH13P55290 ACSM2A-201ENST00000219054 1988 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
CDH13P55290 RARRES1-201ENST00000237696 1952 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
CDH13P55290 NAA35-201ENST00000361671 2649 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
CDH13P55290 CCDC43-201ENST00000315286 2082 ntAPPRIS P2 TSL 1 (best) BASIC18.24■□□□□ 0.51
CDH13P55290 MAN2A1-201ENST00000261483 4667 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
CDH13P55290 CDC14B-208ENST00000463569 1734 ntAPPRIS ALT2 TSL 5 BASIC18.24■□□□□ 0.51
CDH13P55290 SEL1L3-202ENST00000399878 4520 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
CDH13P55290 BOD1L2-201ENST00000585477 3239 ntAPPRIS P1 BASIC18.24■□□□□ 0.51
CDH13P55290 HLA-DRB1-201ENST00000360004 1229 ntAPPRIS P1 BASIC18.24■□□□□ 0.51
CDH13P55290 RAB29-203ENST00000414729 1157 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
CDH13P55290 AL353807.1-201ENST00000427475 662 ntBASIC18.24■□□□□ 0.51
CDH13P55290 ABCC5-211ENST00000446941 883 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
CDH13P55290 AC011506.1-201ENST00000474329 610 ntBASIC18.24■□□□□ 0.51
CDH13P55290 AC019257.1-201ENST00000517676 557 ntTSL 5 BASIC18.24■□□□□ 0.51
CDH13P55290 C14orf144-202ENST00000555282 854 ntTSL 3 BASIC18.24■□□□□ 0.51
CDH13P55290 AF186192.3-201ENST00000583427 947 ntBASIC18.24■□□□□ 0.51
CDH13P55290 AC103746.1-201ENST00000617440 1133 ntTSL 3 BASIC18.24■□□□□ 0.51
CDH13P55290 AC254629.1-202ENST00000618276 2112 ntTSL 2 BASIC18.24■□□□□ 0.51
CDH13P55290 AL031985.4-201ENST00000642138 673 ntBASIC18.24■□□□□ 0.51
CDH13P55290 PCDHB2-202ENST00000622947 2231 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
CDH13P55290 MBD1-206ENST00000382948 2434 ntAPPRIS P3 TSL 2 BASIC18.24■□□□□ 0.51
CDH13P55290 KRT5-201ENST00000252242 2531 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
CDH13P55290 ACBD4-215ENST00000592162 1684 ntTSL 5 BASIC18.24■□□□□ 0.51
CDH13P55290 CRMP1-202ENST00000397890 2911 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
CDH13P55290 PCCB-208ENST00000468777 1877 ntAPPRIS ALT2 TSL 3 BASIC18.24■□□□□ 0.51
CDH13P55290 PLK3-201ENST00000372201 2492 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
CDH13P55290 TMPRSS9-205ENST00000613480 2568 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
CDH13P55290 EIF2AK3-201ENST00000303236 4646 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
CDH13P55290 MEN1-203ENST00000337652 3162 ntAPPRIS P3 TSL 5 BASIC18.24■□□□□ 0.51
CDH13P55290 SAAL1-201ENST00000300013 1518 ntAPPRIS ALT1 TSL 2 BASIC18.23■□□□□ 0.51
CDH13P55290 MCUR1-201ENST00000379170 5471 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
CDH13P55290 PAQR6-201ENST00000292291 1908 ntAPPRIS P3 TSL 1 (best) BASIC18.23■□□□□ 0.51
CDH13P55290 GPR83-202ENST00000539203 1909 ntTSL 5 BASIC18.23■□□□□ 0.51
CDH13P55290 NOV-201ENST00000259526 2522 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
CDH13P55290 NGLY1-207ENST00000428257 2534 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
CDH13P55290 SYBU-201ENST00000276646 2870 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
CDH13P55290 ADRA1A-201ENST00000276393 2281 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
CDH13P55290 ANKRD18DP-201ENST00000335478 2171 ntTSL 2 BASIC18.23■□□□□ 0.51
CDH13P55290 RNFT2-209ENST00000622220 2176 ntTSL 5 BASIC18.23■□□□□ 0.51
CDH13P55290 PACSIN2-203ENST00000402229 1883 ntAPPRIS P1 TSL 5 BASIC18.23■□□□□ 0.51
CDH13P55290 HLA-G-205ENST00000428701 1578 ntAPPRIS P2 BASIC18.23■□□□□ 0.51
CDH13P55290 NUDT16-201ENST00000502852 1552 ntTSL 2 BASIC18.23■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 32.1 ms