Protein–RNA interactions for Protein: P55285

CDH6, Cadherin-6, humanhuman

Predictions only

Length 790 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH6P55285 PDXK-219ENST00000621478 1967 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
CDH6P55285 AL109659.2-201ENST00000606809 1674 ntBASIC19.42■□□□□ 0.7
CDH6P55285 CLK1-205ENST00000434813 2026 ntTSL 2 BASIC19.42■□□□□ 0.7
CDH6P55285 SSC5D-201ENST00000389623 4845 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
CDH6P55285 BMP2K-208ENST00000628286 3848 ntAPPRIS ALT2 TSL 5 BASIC19.42■□□□□ 0.7
CDH6P55285 CMTM3-201ENST00000361909 2159 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CDH6P55285 FAM222A-202ENST00000538780 3294 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CDH6P55285 CHTOP-207ENST00000614256 1840 ntTSL 3 BASIC19.41■□□□□ 0.7
CDH6P55285 SAAL1-201ENST00000300013 1518 ntAPPRIS ALT1 TSL 2 BASIC19.41■□□□□ 0.7
CDH6P55285 NCK1-207ENST00000481752 1971 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
CDH6P55285 AL365232.1-201ENST00000423730 1636 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
CDH6P55285 RUBCN-206ENST00000449205 1603 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
CDH6P55285 NTRK1-201ENST00000358660 2492 ntAPPRIS ALT2 TSL 2 BASIC19.41■□□□□ 0.7
CDH6P55285 RAP1GAP-204ENST00000374761 3318 ntTSL 5 BASIC19.41■□□□□ 0.7
CDH6P55285 NAPRT-202ENST00000426292 1654 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
CDH6P55285 GPAT2P1-201ENST00000444924 1672 ntBASIC19.41■□□□□ 0.7
CDH6P55285 HBA1-201ENST00000320868 577 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CDH6P55285 PHOSPHO2-201ENST00000359744 1125 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CDH6P55285 ENSA-205ENST00000361532 792 ntTSL 2 BASIC19.41■□□□□ 0.7
CDH6P55285 PMEPA1-204ENST00000395814 800 ntTSL 3 BASIC19.41■□□□□ 0.7
CDH6P55285 AL023284.2-201ENST00000405850 579 ntBASIC19.41■□□□□ 0.7
CDH6P55285 AC008763.3-201ENST00000597959 777 ntAPPRIS P1 TSL 4 BASIC19.41■□□□□ 0.7
CDH6P55285 STRADB-202ENST00000392249 2190 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
CDH6P55285 CCNJ-203ENST00000465148 2677 ntAPPRIS P1 TSL 2 BASIC19.41■□□□□ 0.7
CDH6P55285 RBM24-202ENST00000379052 2703 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CDH6P55285 CFAP46-201ENST00000368585 1825 ntAPPRIS ALT2 TSL 2 BASIC19.41■□□□□ 0.7
CDH6P55285 AKAP17A-201ENST00000313871 3204 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
CDH6P55285 AP003774.1-201ENST00000316124 2340 ntTSL 2 BASIC19.41■□□□□ 0.7
CDH6P55285 TH-205ENST00000381175 1898 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
CDH6P55285 MRPL3-202ENST00000425847 1457 ntTSL 2 BASIC19.41■□□□□ 0.7
CDH6P55285 AC079598.2-202ENST00000546624 1451 ntBASIC19.41■□□□□ 0.7
CDH6P55285 SLC5A10-203ENST00000395645 2069 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CDH6P55285 GPR75-201ENST00000394705 2115 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CDH6P55285 PDE6B-202ENST00000429163 2120 ntTSL 2 BASIC19.4■□□□□ 0.7
CDH6P55285 SMARCB1-204ENST00000407422 1643 ntAPPRIS ALT1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CDH6P55285 AP5S1-202ENST00000379567 1791 ntAPPRIS P1 TSL 2 BASIC19.4■□□□□ 0.7
CDH6P55285 VOPP1-201ENST00000285279 2962 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CDH6P55285 CHRAC1-201ENST00000220913 2488 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CDH6P55285 TAF6-211ENST00000453269 2464 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CDH6P55285 AL357874.1-201ENST00000428948 574 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
CDH6P55285 SIVA1-207ENST00000556195 674 ntTSL 3 BASIC19.4■□□□□ 0.7
CDH6P55285 AP000525.1-201ENST00000608286 694 ntBASIC19.4■□□□□ 0.7
CDH6P55285 HOXC10-201ENST00000303460 1936 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CDH6P55285 IQSEC2-218ENST00000640694 5958 ntAPPRIS ALT2 TSL 5 BASIC19.4■□□□□ 0.7
CDH6P55285 AVL9-209ENST00000640103 1367 ntTSL 5 BASIC19.4■□□□□ 0.7
CDH6P55285 KCNQ2-205ENST00000360480 2775 ntAPPRIS ALT2 TSL 5 BASIC19.4■□□□□ 0.7
CDH6P55285 NARFL-201ENST00000251588 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CDH6P55285 LONP1-201ENST00000360614 3236 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CDH6P55285 LYPD3-201ENST00000244333 1694 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CDH6P55285 CHRNB1-201ENST00000306071 2557 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
CDH6P55285 SLC16A13-201ENST00000308027 1748 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
CDH6P55285 CPT2-207ENST00000636867 2643 ntTSL 5 BASIC19.39■□□□□ 0.7
CDH6P55285 BRMS1L-201ENST00000216807 2657 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
CDH6P55285 AC073592.3-201ENST00000625118 1834 ntBASIC19.39■□□□□ 0.7
CDH6P55285 DUS1L-202ENST00000354321 2151 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CDH6P55285 MCUR1-201ENST00000379170 5471 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CDH6P55285 AL445433.2-201ENST00000425113 2544 ntTSL 2 BASIC19.39■□□□□ 0.69
CDH6P55285 TPPP3-201ENST00000290942 1116 ntAPPRIS P1 TSL 2 BASIC19.39■□□□□ 0.69
CDH6P55285 PRR31-201ENST00000371629 978 ntTSL 2 BASIC19.39■□□□□ 0.69
CDH6P55285 CCDC107-202ENST00000378406 1016 ntAPPRIS ALT2 TSL 2 BASIC19.39■□□□□ 0.69
CDH6P55285 TMEM240-201ENST00000378733 718 ntAPPRIS P1 TSL 2 BASIC19.39■□□□□ 0.69
CDH6P55285 TPPP3-202ENST00000393957 1058 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CDH6P55285 METTL21A-206ENST00000432416 869 ntTSL 3 BASIC19.39■□□□□ 0.69
CDH6P55285 BX322234.1-201ENST00000444188 980 ntTSL 3 BASIC19.39■□□□□ 0.69
CDH6P55285 MCCD1P1-208ENST00000445732 328 ntBASIC19.39■□□□□ 0.69
CDH6P55285 AC098864.1-204ENST00000513752 805 ntTSL 4 BASIC19.39■□□□□ 0.69
CDH6P55285 CDC42EP2-202ENST00000533419 1279 ntAPPRIS P1 TSL 3 BASIC19.39■□□□□ 0.69
CDH6P55285 C12orf76-208ENST00000551185 496 ntTSL 2 BASIC19.39■□□□□ 0.69
CDH6P55285 C16orf74-202ENST00000602583 1237 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
CDH6P55285 SNX21-213ENST00000614929 587 ntTSL 5 BASIC19.39■□□□□ 0.69
CDH6P55285 SMN2-202ENST00000380742 1388 ntAPPRIS ALT2 TSL 5 BASIC19.39■□□□□ 0.69
CDH6P55285 SLC35A2-217ENST00000635589 1424 ntTSL 2 BASIC19.39■□□□□ 0.69
CDH6P55285 ERLIN1-203ENST00000421367 5792 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CDH6P55285 SIM2-201ENST00000290399 4442 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CDH6P55285 NUDT17-201ENST00000334513 1473 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.69
CDH6P55285 SRMS-201ENST00000217188 1516 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CDH6P55285 MFHAS1-201ENST00000276282 6414 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CDH6P55285 SLC25A51-202ENST00000377716 1691 ntAPPRIS P1 TSL 3 BASIC19.39■□□□□ 0.69
CDH6P55285 PEX5L-206ENST00000465751 2147 ntAPPRIS ALT2 TSL 2 BASIC19.39■□□□□ 0.69
CDH6P55285 TFEB-203ENST00000358871 2188 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
CDH6P55285 TLE4-205ENST00000376544 4871 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
CDH6P55285 POLR3E-209ENST00000564209 2464 ntTSL 2 BASIC19.39■□□□□ 0.69
CDH6P55285 CNIH3-201ENST00000272133 2558 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CDH6P55285 AGPAT3-201ENST00000291572 5546 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
CDH6P55285 AGO4-201ENST00000373210 7116 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
CDH6P55285 ALKBH4-201ENST00000292566 2105 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
CDH6P55285 CDK4-202ENST00000312990 1650 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
CDH6P55285 TCTEX1D2-201ENST00000325318 673 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
CDH6P55285 EXOSC3-201ENST00000327304 1806 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
CDH6P55285 FAM91A1-201ENST00000334705 5511 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
CDH6P55285 CENPA-202ENST00000335756 1452 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
CDH6P55285 NF2-203ENST00000353887 1845 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
CDH6P55285 BANP-202ENST00000355022 2164 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
CDH6P55285 RAB4A-201ENST00000366690 2966 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
CDH6P55285 CCK-202ENST00000396169 1527 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
CDH6P55285 SIGIRR-202ENST00000397632 1598 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
CDH6P55285 RAPGEF5-203ENST00000405243 2800 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
CDH6P55285 AL390955.1-201ENST00000428694 934 ntBASIC19.38■□□□□ 0.69
CDH6P55285 AC004890.2-202ENST00000463462 1494 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
CDH6P55285 SLC39A13-212ENST00000531974 856 ntTSL 2 BASIC19.38■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 91.8 ms