Protein–RNA interactions for Protein: P55055

NR1H2, Oxysterols receptor LXR-beta, humanhuman

Predictions only

Length 460 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H2P55055 GYPC-202ENST00000356887 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
NR1H2P55055 MRPL15-201ENST00000260102 1147 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
NR1H2P55055 ZCWPW1-201ENST00000360951 2110 ntAPPRIS ALT2 TSL 2 BASIC17.67■□□□□ 0.42
NR1H2P55055 N4BP2L1-203ENST00000380133 903 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
NR1H2P55055 FAM131A-208ENST00000453072 1038 ntTSL 2 BASIC17.67■□□□□ 0.42
NR1H2P55055 RPS2P4-201ENST00000476944 856 ntBASIC17.67■□□□□ 0.42
NR1H2P55055 RNF121-214ENST00000533380 870 ntTSL 3 BASIC17.67■□□□□ 0.42
NR1H2P55055 ICAM2-207ENST00000579687 1154 ntAPPRIS P1 TSL 3 BASIC17.67■□□□□ 0.42
NR1H2P55055 AC007993.2-201ENST00000592842 521 ntTSL 4 BASIC17.67■□□□□ 0.42
NR1H2P55055 FAM197Y4-202ENST00000622692 608 ntBASIC17.67■□□□□ 0.42
NR1H2P55055 TBX18-202ENST00000369663 6245 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
NR1H2P55055 PDE9A-209ENST00000398227 1606 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
NR1H2P55055 CTSB-232ENST00000534510 1989 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
NR1H2P55055 SLC39A1-211ENST00000621013 2322 ntAPPRIS P1 TSL 2 BASIC17.67■□□□□ 0.42
NR1H2P55055 AC010173.1-201ENST00000549023 1453 ntTSL 2 BASIC17.67■□□□□ 0.42
NR1H2P55055 KLHDC4-203ENST00000347925 1821 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
NR1H2P55055 HNF1B-202ENST00000614313 1819 ntTSL 5 BASIC17.67■□□□□ 0.42
NR1H2P55055 HNF1B-203ENST00000617272 1820 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
NR1H2P55055 MINPP1-201ENST00000371994 2183 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
NR1H2P55055 TNFAIP1-202ENST00000544907 1656 ntTSL 2 BASIC17.67■□□□□ 0.42
NR1H2P55055 TRIM15-207ENST00000376694 2214 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
NR1H2P55055 IRAK3-202ENST00000457197 1853 ntTSL 2 BASIC17.67■□□□□ 0.42
NR1H2P55055 MORN1-202ENST00000378529 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
NR1H2P55055 TLK2-201ENST00000326270 3512 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
NR1H2P55055 ARHGAP8-204ENST00000389774 1725 ntAPPRIS ALT2 TSL 2 BASIC17.67■□□□□ 0.42
NR1H2P55055 AC012317.2-201ENST00000623305 2251 ntBASIC17.67■□□□□ 0.42
NR1H2P55055 GGNBP2-212ENST00000613102 2847 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
NR1H2P55055 ADAMTS16-203ENST00000511368 2682 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
NR1H2P55055 JADE3-204ENST00000614628 4934 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
NR1H2P55055 C2CD2L-205ENST00000528586 2320 ntTSL 2 BASIC17.66■□□□□ 0.42
NR1H2P55055 PRR18-201ENST00000322583 3084 ntAPPRIS P2 BASIC17.66■□□□□ 0.42
NR1H2P55055 EXTL3-213ENST00000523149 1779 ntTSL 5 BASIC17.66■□□□□ 0.42
NR1H2P55055 EIF4G3-214ENST00000634879 5325 ntTSL 5 BASIC17.66■□□□□ 0.42
NR1H2P55055 KRT16P6-202ENST00000425692 1426 ntBASIC17.66■□□□□ 0.42
NR1H2P55055 SAMD11-210ENST00000616016 2391 ntTSL 5 BASIC17.66■□□□□ 0.42
NR1H2P55055 ADGRG2-202ENST00000354791 4494 ntTSL 5 BASIC17.66■□□□□ 0.42
NR1H2P55055 LBX1-AS1-201ENST00000430651 2553 ntTSL 2 BASIC17.66■□□□□ 0.42
NR1H2P55055 MAP3K11-210ENST00000532507 1812 ntTSL 2 BASIC17.66■□□□□ 0.42
NR1H2P55055 C3orf58-201ENST00000315691 4346 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
NR1H2P55055 OGFR-201ENST00000290291 2410 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
NR1H2P55055 ST6GALNAC6-202ENST00000373141 2424 ntAPPRIS ALT1 TSL 2 BASIC17.66■□□□□ 0.42
NR1H2P55055 GGTLC1-203ENST00000335694 1046 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
NR1H2P55055 PUSL1-201ENST00000379031 1287 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
NR1H2P55055 GGT1-206ENST00000404223 952 ntTSL 2 BASIC17.66■□□□□ 0.42
NR1H2P55055 AL596275.1-201ENST00000423464 877 ntBASIC17.66■□□□□ 0.42
NR1H2P55055 NDUFB2-203ENST00000461457 559 ntTSL 3 BASIC17.66■□□□□ 0.42
NR1H2P55055 DLEU7-203ENST00000504404 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
NR1H2P55055 LINC01301-204ENST00000530725 577 ntTSL 4 BASIC17.66■□□□□ 0.42
NR1H2P55055 AC127496.6-201ENST00000576215 338 ntTSL 3 BASIC17.66■□□□□ 0.42
NR1H2P55055 GGTLC2-204ENST00000613850 973 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
NR1H2P55055 GGTLC2-205ENST00000618722 1047 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
NR1H2P55055 SLC35A2-213ENST00000635015 1008 ntTSL 2 BASIC17.66■□□□□ 0.42
NR1H2P55055 SPEG-203ENST00000396688 1457 ntTSL 3 BASIC17.66■□□□□ 0.42
NR1H2P55055 ISL2-201ENST00000290759 1881 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
NR1H2P55055 BRI3BP-201ENST00000341446 6648 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
NR1H2P55055 NEXN-AS1-201ENST00000421331 2292 ntTSL 2 BASIC17.66■□□□□ 0.42
NR1H2P55055 ANKMY1-202ENST00000361678 2499 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
NR1H2P55055 DVL2-209ENST00000575458 2659 ntAPPRIS ALT2 TSL 2 BASIC17.66■□□□□ 0.42
NR1H2P55055 COQ8A-201ENST00000366777 2872 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
NR1H2P55055 YARS2-201ENST00000324868 2122 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
NR1H2P55055 IDUA-210ENST00000514224 2130 ntTSL 2 BASIC17.66■□□□□ 0.42
NR1H2P55055 TCP11-228ENST00000611141 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
NR1H2P55055 ZNF534-201ENST00000301085 1525 ntTSL 2 BASIC17.66■□□□□ 0.42
NR1H2P55055 KLHL35-201ENST00000376292 1500 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
NR1H2P55055 ZNF416-201ENST00000196489 2561 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
NR1H2P55055 RPH3AL-222ENST00000618002 2578 ntAPPRIS P2 TSL 5 BASIC17.66■□□□□ 0.42
NR1H2P55055 MFSD2A-202ENST00000372811 2154 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
NR1H2P55055 EIF2B4-201ENST00000347454 1792 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
NR1H2P55055 BRMS1L-201ENST00000216807 2657 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
NR1H2P55055 FKBP10-201ENST00000321562 2662 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
NR1H2P55055 FER1L4-211ENST00000616283 1818 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
NR1H2P55055 PLSCR3-213ENST00000576362 1605 ntTSL 3 BASIC17.65■□□□□ 0.42
NR1H2P55055 PNKP-215ENST00000600910 1600 ntTSL 5 BASIC17.65■□□□□ 0.42
NR1H2P55055 UTP18-201ENST00000225298 1894 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
NR1H2P55055 PRDM11-201ENST00000424263 1858 ntAPPRIS P3 TSL 2 BASIC17.65■□□□□ 0.42
NR1H2P55055 RBFOX1-204ENST00000422070 1684 ntTSL 2 BASIC17.65■□□□□ 0.42
NR1H2P55055 RNF187-201ENST00000305943 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
NR1H2P55055 UNC5D-202ENST00000404895 3252 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
NR1H2P55055 CLCN2-205ENST00000457512 2820 ntAPPRIS ALT2 TSL 2 BASIC17.65■□□□□ 0.42
NR1H2P55055 DKK3-201ENST00000326932 2636 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
NR1H2P55055 TPBG-203ENST00000543496 2881 ntAPPRIS P1 TSL 2 BASIC17.65■□□□□ 0.42
NR1H2P55055 FHL1-205ENST00000370690 2441 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
NR1H2P55055 ELF3-201ENST00000359651 4994 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
NR1H2P55055 OGG1-209ENST00000383826 1069 ntTSL 5 BASIC17.65■□□□□ 0.42
NR1H2P55055 MIR718-201ENST00000390190 70 ntBASIC17.65■□□□□ 0.42
NR1H2P55055 METTL21A-207ENST00000442521 1003 ntAPPRIS P1 TSL 2 BASIC17.65■□□□□ 0.42
NR1H2P55055 RARRES1-204ENST00000479756 839 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
NR1H2P55055 MIR381HG-201ENST00000553692 425 ntTSL 3 BASIC17.65■□□□□ 0.42
NR1H2P55055 MMP25-AS1-204ENST00000572574 794 ntTSL 5 BASIC17.65■□□□□ 0.42
NR1H2P55055 AL359736.2-201ENST00000621992 437 ntBASIC17.65■□□□□ 0.42
NR1H2P55055 GOLGA7-204ENST00000520817 1984 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
NR1H2P55055 DNAJA3-202ENST00000355296 2591 ntAPPRIS ALT1 TSL 1 (best) BASIC17.65■□□□□ 0.42
NR1H2P55055 GPR78-201ENST00000382487 1694 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
NR1H2P55055 FGF16-201ENST00000439435 1650 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
NR1H2P55055 PPP2R2C-206ENST00000507294 1667 ntTSL 2 BASIC17.64■□□□□ 0.42
NR1H2P55055 CPT2-208ENST00000636891 2746 ntTSL 5 BASIC17.64■□□□□ 0.42
NR1H2P55055 CPT2-210ENST00000637252 2739 ntTSL 5 BASIC17.64■□□□□ 0.42
NR1H2P55055 PCDH7-201ENST00000361762 6403 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.42
NR1H2P55055 MID1IP1-201ENST00000336949 2536 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
NR1H2P55055 TMEM53-205ENST00000372244 1472 ntTSL 2 BASIC17.64■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 27.4 ms