Protein–RNA interactions for Protein: P54750

PDE1A, Calcium/calmodulin-dependent 3',5'-cyclic nucleotide phosphodiesterase 1A, humanhuman

Predictions only

Length 535 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDE1AP54750 AL954642.1-201ENST00000428088 538 ntTSL 3 BASIC22.77■■□□□ 1.24
PDE1AP54750 LINC00595-207ENST00000476909 792 ntTSL 2 BASIC22.77■■□□□ 1.24
PDE1AP54750 IKBKB-210ENST00000518983 447 ntTSL 2 BASIC22.77■■□□□ 1.24
PDE1AP54750 LY6E-211ENST00000521699 1256 ntAPPRIS P2 TSL 5 BASIC22.77■■□□□ 1.24
PDE1AP54750 RAB2A-211ENST00000531289 1058 ntTSL 2 BASIC22.77■■□□□ 1.24
PDE1AP54750 NAPSB-206ENST00000562112 1266 ntBASIC22.77■■□□□ 1.24
PDE1AP54750 PRR29-205ENST00000579184 1052 ntAPPRIS ALT2 TSL 2 BASIC22.77■■□□□ 1.24
PDE1AP54750 ATP5D-207ENST00000591660 637 ntAPPRIS P1 TSL 3 BASIC22.77■■□□□ 1.24
PDE1AP54750 ANKS3-201ENST00000304283 2662 ntAPPRIS P1 TSL 2 BASIC22.77■■□□□ 1.24
PDE1AP54750 ZNF510-203ENST00000375231 5616 ntAPPRIS P1 TSL 1 (best) BASIC22.77■■□□□ 1.24
PDE1AP54750 SLC39A7-201ENST00000374675 2153 ntAPPRIS P1 TSL 1 (best) BASIC22.77■■□□□ 1.24
PDE1AP54750 AGAP2-AS1-201ENST00000542466 1500 ntTSL 1 (best) BASIC22.77■■□□□ 1.24
PDE1AP54750 ST3GAL3-201ENST00000262915 2470 ntTSL 5 BASIC22.76■■□□□ 1.23
PDE1AP54750 ACSM2A-201ENST00000219054 1988 ntAPPRIS P1 TSL 1 (best) BASIC22.76■■□□□ 1.23
PDE1AP54750 CHRNB1-201ENST00000306071 2557 ntAPPRIS P1 TSL 1 (best) BASIC22.76■■□□□ 1.23
PDE1AP54750 RAPH1-201ENST00000308091 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC22.76■■□□□ 1.23
PDE1AP54750 EEF1D-205ENST00000442189 2207 ntAPPRIS P4 TSL 1 (best) BASIC22.76■■□□□ 1.23
PDE1AP54750 ZFYVE1-202ENST00000394207 1183 ntTSL 2 BASIC22.76■■□□□ 1.23
PDE1AP54750 KCTD7-202ENST00000443322 1160 ntAPPRIS ALT1 TSL 1 (best) BASIC22.76■■□□□ 1.23
PDE1AP54750 KRT8P12-201ENST00000468527 998 ntTSL 2 BASIC22.76■■□□□ 1.23
PDE1AP54750 RARRES1-204ENST00000479756 839 ntTSL 1 (best) BASIC22.76■■□□□ 1.23
PDE1AP54750 REPIN1-210ENST00000482680 1029 ntTSL 2 BASIC22.76■■□□□ 1.23
PDE1AP54750 SIGLEC15-202ENST00000546268 1054 ntTSL 2 BASIC22.76■■□□□ 1.23
PDE1AP54750 EBLN3P-205ENST00000629870 958 ntTSL 3 BASIC22.76■■□□□ 1.23
PDE1AP54750 OGFOD2-205ENST00000454694 1488 ntTSL 1 (best) BASIC22.76■■□□□ 1.23
PDE1AP54750 PPFIA1-201ENST00000253925 5234 ntAPPRIS P4 TSL 1 (best) BASIC22.76■■□□□ 1.23
PDE1AP54750 LMO4-202ENST00000370544 5405 ntAPPRIS P1 TSL 1 (best) BASIC22.76■■□□□ 1.23
PDE1AP54750 TMEM206-201ENST00000261455 2475 ntAPPRIS P1 TSL 1 (best) BASIC22.76■■□□□ 1.23
PDE1AP54750 MCC-208ENST00000514701 2855 ntTSL 2 BASIC22.76■■□□□ 1.23
PDE1AP54750 SLC12A4-202ENST00000422611 4670 ntTSL 2 BASIC22.76■■□□□ 1.23
PDE1AP54750 AATF-208ENST00000619387 2141 ntAPPRIS P1 TSL 1 (best) BASIC22.76■■□□□ 1.23
PDE1AP54750 STEAP1B-201ENST00000404369 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC22.76■■□□□ 1.23
PDE1AP54750 CHRM4-201ENST00000433765 1511 ntAPPRIS P1 BASIC22.76■■□□□ 1.23
PDE1AP54750 MYC-207ENST00000621592 2366 ntAPPRIS ALT1 TSL 1 (best) BASIC22.76■■□□□ 1.23
PDE1AP54750 KCNIP4-205ENST00000382152 1767 ntTSL 5 BASIC22.76■■□□□ 1.23
PDE1AP54750 HMBS-221ENST00000544387 1351 ntTSL 2 BASIC22.76■■□□□ 1.23
PDE1AP54750 TCP11-201ENST00000244645 2018 ntAPPRIS P3 TSL 1 (best) BASIC22.75■■□□□ 1.23
PDE1AP54750 CDK13-202ENST00000340829 5066 ntAPPRIS ALT1 TSL 1 (best) BASIC22.75■■□□□ 1.23
PDE1AP54750 SIGIRR-220ENST00000531205 1649 ntTSL 2 BASIC22.75■■□□□ 1.23
PDE1AP54750 EMX2-201ENST00000442245 2710 ntTSL 2 BASIC22.75■■□□□ 1.23
PDE1AP54750 FOXP1-214ENST00000493089 2703 ntAPPRIS ALT1 TSL 2 BASIC22.75■■□□□ 1.23
PDE1AP54750 ZNF395-211ENST00000523202 2068 ntAPPRIS P1 TSL 1 (best) BASIC22.75■■□□□ 1.23
PDE1AP54750 THOP1-205ENST00000586677 1872 ntTSL 2 BASIC22.75■■□□□ 1.23
PDE1AP54750 PTGER3-201ENST00000306666 2333 ntAPPRIS ALT2 TSL 1 (best) BASIC22.75■■□□□ 1.23
PDE1AP54750 ATP9A-202ENST00000338821 8106 ntAPPRIS P1 TSL 1 (best) BASIC22.75■■□□□ 1.23
PDE1AP54750 SSC4D-201ENST00000275560 2801 ntAPPRIS P1 TSL 1 (best) BASIC22.75■■□□□ 1.23
PDE1AP54750 MSLN-202ENST00000545450 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC22.75■■□□□ 1.23
PDE1AP54750 MROH1-202ENST00000423230 1712 ntTSL 1 (best) BASIC22.75■■□□□ 1.23
PDE1AP54750 FBXO32-202ENST00000443022 1227 ntTSL 1 (best) BASIC22.75■■□□□ 1.23
PDE1AP54750 GXYLT1P6-201ENST00000456472 1187 ntBASIC22.75■■□□□ 1.23
PDE1AP54750 AL929554.1-201ENST00000568665 460 ntAPPRIS P1 TSL 3 BASIC22.75■■□□□ 1.23
PDE1AP54750 AC027796.4-201ENST00000575741 874 ntTSL 5 BASIC22.75■■□□□ 1.23
PDE1AP54750 RAB11B-AS1-201ENST00000593581 1013 ntTSL 1 (best) BASIC22.75■■□□□ 1.23
PDE1AP54750 FAM87A-204ENST00000613235 858 ntBASIC22.75■■□□□ 1.23
PDE1AP54750 CD248-201ENST00000311330 2558 ntAPPRIS P1 BASIC22.75■■□□□ 1.23
PDE1AP54750 WNT8B-201ENST00000343737 2112 ntAPPRIS P1 TSL 1 (best) BASIC22.75■■□□□ 1.23
PDE1AP54750 PSPC1-201ENST00000338910 2407 ntAPPRIS P1 TSL 1 (best) BASIC22.74■■□□□ 1.23
PDE1AP54750 KLF6-204ENST00000469435 2169 ntTSL 1 (best) BASIC22.74■■□□□ 1.23
PDE1AP54750 LRP1-204ENST00000553277 1693 ntTSL 1 (best) BASIC22.74■■□□□ 1.23
PDE1AP54750 CNNM1-201ENST00000356713 5959 ntAPPRIS P1 TSL 1 (best) BASIC22.74■■□□□ 1.23
PDE1AP54750 KCNN4-209ENST00000615047 2029 ntTSL 5 BASIC22.74■■□□□ 1.23
PDE1AP54750 HSCB-201ENST00000216027 1114 ntAPPRIS P1 TSL 1 (best) BASIC22.74■■□□□ 1.23
PDE1AP54750 CHCHD6-201ENST00000290913 1006 ntAPPRIS P2 TSL 1 (best) BASIC22.74■■□□□ 1.23
PDE1AP54750 ING1-202ENST00000338450 1189 ntTSL 1 (best) BASIC22.74■■□□□ 1.23
PDE1AP54750 ZCWPW1-201ENST00000360951 2110 ntAPPRIS ALT2 TSL 2 BASIC22.74■■□□□ 1.23
PDE1AP54750 PLPP7-201ENST00000372261 972 ntTSL 2 BASIC22.74■■□□□ 1.23
PDE1AP54750 UQCRQ-201ENST00000378665 586 ntAPPRIS P1 TSL 1 (best) BASIC22.74■■□□□ 1.23
PDE1AP54750 CRAT-202ENST00000393384 973 ntTSL 2 BASIC22.74■■□□□ 1.23
PDE1AP54750 CYB561D2-204ENST00000424512 1212 ntAPPRIS P1 TSL 5 BASIC22.74■■□□□ 1.23
PDE1AP54750 IAH1-202ENST00000470914 2137 ntTSL 1 (best) BASIC22.74■■□□□ 1.23
PDE1AP54750 AP006621.4-201ENST00000527021 532 ntTSL 5 BASIC22.74■■□□□ 1.23
PDE1AP54750 NUBP2-206ENST00000565134 815 ntTSL 5 BASIC22.74■■□□□ 1.23
PDE1AP54750 FAM222A-202ENST00000538780 3294 ntAPPRIS P1 TSL 1 (best) BASIC22.74■■□□□ 1.23
PDE1AP54750 MMD2-202ENST00000404774 2415 ntTSL 1 (best) BASIC22.74■■□□□ 1.23
PDE1AP54750 LYSMD4-210ENST00000545021 2431 ntTSL 4 BASIC22.74■■□□□ 1.23
PDE1AP54750 LONRF1-208ENST00000533751 3043 ntTSL 5 BASIC22.74■■□□□ 1.23
PDE1AP54750 OR13J1-201ENST00000377981 1339 ntAPPRIS P1 BASIC22.74■■□□□ 1.23
PDE1AP54750 PDE9A-209ENST00000398227 1606 ntTSL 1 (best) BASIC22.74■■□□□ 1.23
PDE1AP54750 SPNS1-204ENST00000352260 1948 ntTSL 1 (best) BASIC22.74■■□□□ 1.23
PDE1AP54750 PRSS23-209ENST00000533902 2043 ntTSL 4 BASIC22.74■■□□□ 1.23
PDE1AP54750 CORO6-212ENST00000584969 1416 ntAPPRIS ALT1 TSL 5 BASIC22.74■■□□□ 1.23
PDE1AP54750 CAMKK2-207ENST00000404169 2116 ntAPPRIS P4 TSL 1 (best) BASIC22.73■■□□□ 1.23
PDE1AP54750 ENDOV-225ENST00000522751 1475 ntTSL 5 BASIC22.73■■□□□ 1.23
PDE1AP54750 SNHG10-201ENST00000500370 1531 ntTSL 2 BASIC22.73■■□□□ 1.23
PDE1AP54750 TESMIN-201ENST00000255087 2579 ntAPPRIS P1 TSL 1 (best) BASIC22.73■■□□□ 1.23
PDE1AP54750 GTF2IRD2-207ENST00000625377 1910 ntTSL 5 BASIC22.73■■□□□ 1.23
PDE1AP54750 TCTN1-225ENST00000551590 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC22.73■■□□□ 1.23
PDE1AP54750 CDHR4-201ENST00000343366 1188 ntTSL 1 (best) BASIC22.73■■□□□ 1.23
PDE1AP54750 AP000593.1-201ENST00000393668 712 ntBASIC22.73■■□□□ 1.23
PDE1AP54750 DHRS4L2-202ENST00000397071 1117 ntTSL 2 BASIC22.73■■□□□ 1.23
PDE1AP54750 TSPY1-201ENST00000423647 1171 ntAPPRIS ALT2 TSL 1 (best) BASIC22.73■■□□□ 1.23
PDE1AP54750 PHB2-202ENST00000440277 996 ntTSL 5 BASIC22.73■■□□□ 1.23
PDE1AP54750 ECEL1P2-202ENST00000465689 757 ntBASIC22.73■■□□□ 1.23
PDE1AP54750 LINC01184-202ENST00000501173 949 ntTSL 5 BASIC22.73■■□□□ 1.23
PDE1AP54750 HRASLS5-205ENST00000539221 1167 ntTSL 1 (best) BASIC22.73■■□□□ 1.23
PDE1AP54750 AC015712.4-203ENST00000559673 630 ntTSL 3 BASIC22.73■■□□□ 1.23
PDE1AP54750 CCDC28A-203ENST00000617445 1240 ntAPPRIS P1 TSL 1 (best) BASIC22.73■■□□□ 1.23
PDE1AP54750 FOXI3-201ENST00000428390 2804 ntAPPRIS P1 TSL 3 BASIC22.73■■□□□ 1.23
PDE1AP54750 PEX16-202ENST00000378750 1335 ntAPPRIS P1 TSL 1 (best) BASIC22.73■■□□□ 1.23
PDE1AP54750 ETV7-202ENST00000340181 1719 ntAPPRIS P3 TSL 1 (best) BASIC22.73■■□□□ 1.23
Retrieved 100 of 98,524 protein–RNA pairs in 28 ms