Protein–RNA interactions for Protein: P53007

SLC25A1, Tricarboxylate transport protein, mitochondrial, humanhuman

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC25A1P53007 MCCC1-215ENST00000629669 2316 ntTSL 5 BASIC16.59■□□□□ 0.25
SLC25A1P53007 FAM222A-202ENST00000538780 3294 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
SLC25A1P53007 LHX8-201ENST00000294638 2373 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
SLC25A1P53007 FAM99A-201ENST00000382167 1432 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
SLC25A1P53007 AC118553.2-203ENST00000639037 2590 ntAPPRIS P5 TSL 5 BASIC16.59■□□□□ 0.25
SLC25A1P53007 AZIN1-201ENST00000337198 4721 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
SLC25A1P53007 VPS26B-202ENST00000525095 1558 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
SLC25A1P53007 TICAM1-202ENST00000621756 1650 ntTSL 5 BASIC16.59■□□□□ 0.25
SLC25A1P53007 MRPL3-201ENST00000264995 1706 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
SLC25A1P53007 PLEKHG5-206ENST00000377748 5221 ntAPPRIS ALT2 TSL 2 BASIC16.59■□□□□ 0.25
SLC25A1P53007 DNLZ-202ENST00000371739 2934 ntTSL 5 BASIC16.59■□□□□ 0.25
SLC25A1P53007 DDX42-216ENST00000583590 4148 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
SLC25A1P53007 FKBP8-206ENST00000596558 1756 ntAPPRIS ALT1 TSL 2 BASIC16.59■□□□□ 0.25
SLC25A1P53007 ERICH1-201ENST00000262109 1813 ntAPPRIS P2 TSL 1 (best) BASIC16.59■□□□□ 0.25
SLC25A1P53007 SEC61A2-201ENST00000298428 1893 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
SLC25A1P53007 RPS6KB1-204ENST00000443572 1913 ntTSL 2 BASIC16.58■□□□□ 0.25
SLC25A1P53007 AC135776.1-201ENST00000319817 2481 ntBASIC16.58■□□□□ 0.25
SLC25A1P53007 GCSH-208ENST00000639169 2537 ntTSL 2 BASIC16.58■□□□□ 0.25
SLC25A1P53007 WAC-205ENST00000375664 5924 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
SLC25A1P53007 UBE2QL1-201ENST00000399816 4317 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
SLC25A1P53007 AL133373.2-201ENST00000623187 2828 ntBASIC16.58■□□□□ 0.25
SLC25A1P53007 DMRT2-206ENST00000412350 1244 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
SLC25A1P53007 LY6E-202ENST00000429120 1173 ntAPPRIS P2 TSL 1 (best) BASIC16.58■□□□□ 0.24
SLC25A1P53007 AC007405.3-201ENST00000429172 561 ntTSL 3 BASIC16.58■□□□□ 0.24
SLC25A1P53007 ZNF346-203ENST00000503425 1191 ntTSL 2 BASIC16.58■□□□□ 0.24
SLC25A1P53007 RPPH1-201ENST00000516869 333 ntBASIC16.58■□□□□ 0.24
SLC25A1P53007 STAC3-202ENST00000546246 1014 ntTSL 2 BASIC16.58■□□□□ 0.24
SLC25A1P53007 RPS15-203ENST00000586096 570 ntTSL 2 BASIC16.58■□□□□ 0.24
SLC25A1P53007 AP000692.2-201ENST00000608391 879 ntBASIC16.58■□□□□ 0.24
SLC25A1P53007 TEX13A-202ENST00000609007 1349 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
SLC25A1P53007 PRSS50-202ENST00000315170 1372 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
SLC25A1P53007 FGFR3-202ENST00000340107 4293 ntAPPRIS ALT2 TSL 5 BASIC16.58■□□□□ 0.24
SLC25A1P53007 SLC25A29-215ENST00000556505 1540 ntTSL 2 BASIC16.58■□□□□ 0.24
SLC25A1P53007 AC008878.3-201ENST00000617428 4964 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
SLC25A1P53007 GTF2H4-201ENST00000259895 1735 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
SLC25A1P53007 AC142086.1-202ENST00000398669 1839 ntTSL 2 BASIC16.58■□□□□ 0.24
SLC25A1P53007 AC093677.2-201ENST00000600169 1863 ntBASIC16.58■□□□□ 0.24
SLC25A1P53007 PMAIP1-202ENST00000316660 1948 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
SLC25A1P53007 OPA3-202ENST00000323060 2250 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
SLC25A1P53007 GSEC-201ENST00000626810 2289 ntTSL 2 BASIC16.58■□□□□ 0.24
SLC25A1P53007 TRABD-201ENST00000303434 2329 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.24
SLC25A1P53007 TDRKH-207ENST00000458431 2768 ntAPPRIS P2 TSL 1 (best) BASIC16.57■□□□□ 0.24
SLC25A1P53007 ENTPD6-209ENST00000433259 2654 ntTSL 5 BASIC16.57■□□□□ 0.24
SLC25A1P53007 P2RY6-208ENST00000540124 2351 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
SLC25A1P53007 TCP11-228ENST00000611141 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
SLC25A1P53007 GTF2IRD2-207ENST00000625377 1910 ntTSL 5 BASIC16.57■□□□□ 0.24
SLC25A1P53007 APOA5-201ENST00000227665 1897 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
SLC25A1P53007 GATB-213ENST00000515812 1893 ntTSL 5 BASIC16.57■□□□□ 0.24
SLC25A1P53007 LRRC27-201ENST00000344079 1809 ntAPPRIS ALT2 TSL 2 BASIC16.57■□□□□ 0.24
SLC25A1P53007 CD40-201ENST00000372276 1623 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
SLC25A1P53007 C19orf57-208ENST00000591586 1559 ntAPPRIS ALT2 TSL 5 BASIC16.57■□□□□ 0.24
SLC25A1P53007 ETV2-203ENST00000402764 1487 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
SLC25A1P53007 FSCN1P1-201ENST00000568912 1481 ntBASIC16.57■□□□□ 0.24
SLC25A1P53007 METTL21A-201ENST00000272839 1210 ntTSL 5 BASIC16.57■□□□□ 0.24
SLC25A1P53007 KIAA1522-201ENST00000294521 878 ntAPPRIS ALT2 TSL 2 BASIC16.57■□□□□ 0.24
SLC25A1P53007 NUDT8-202ENST00000376693 728 ntAPPRIS ALT2 TSL 2 BASIC16.57■□□□□ 0.24
SLC25A1P53007 ANKRD54-204ENST00000411961 946 ntTSL 5 BASIC16.57■□□□□ 0.24
SLC25A1P53007 AP000697.1-201ENST00000430607 339 ntTSL 5 BASIC16.57■□□□□ 0.24
SLC25A1P53007 SNX5-213ENST00000486039 602 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
SLC25A1P53007 TNFRSF18-204ENST00000486728 727 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
SLC25A1P53007 CFL2-205ENST00000555765 632 ntTSL 2 BASIC16.57■□□□□ 0.24
SLC25A1P53007 BCL7A-203ENST00000538010 6247 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
SLC25A1P53007 ZNF385B-204ENST00000410066 3288 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
SLC25A1P53007 QSOX2-201ENST00000358701 4530 ntAPPRIS P1 TSL 2 BASIC16.57■□□□□ 0.24
SLC25A1P53007 TXNRD3-202ENST00000523403 2351 ntAPPRIS ALT2 TSL 2 BASIC16.57■□□□□ 0.24
SLC25A1P53007 TRPV4-208ENST00000544971 2295 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
SLC25A1P53007 NKD2-202ENST00000296849 2155 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
SLC25A1P53007 PARP15-202ENST00000464300 2156 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
SLC25A1P53007 RARRES1-201ENST00000237696 1952 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
SLC25A1P53007 SEMA6C-210ENST00000621728 1918 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
SLC25A1P53007 VOPP1-201ENST00000285279 2962 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
SLC25A1P53007 MSI2-203ENST00000416426 1714 ntTSL 2 BASIC16.56■□□□□ 0.24
SLC25A1P53007 SCRIB-201ENST00000320476 5143 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
SLC25A1P53007 PAQR4-202ENST00000318782 2793 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
SLC25A1P53007 FAM50B-201ENST00000380272 1628 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
SLC25A1P53007 PSMD8-207ENST00000592035 1581 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
SLC25A1P53007 DAG1-221ENST00000541308 5676 ntAPPRIS P1 TSL 5 BASIC16.56■□□□□ 0.24
SLC25A1P53007 EFEMP2-210ENST00000528176 1504 ntTSL 5 BASIC16.56■□□□□ 0.24
SLC25A1P53007 FGFR1-203ENST00000341462 6054 ntTSL 5 BASIC16.56■□□□□ 0.24
SLC25A1P53007 CAPN5-205ENST00000529629 2333 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
SLC25A1P53007 GUK1-201ENST00000312726 1084 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
SLC25A1P53007 AP000593.1-201ENST00000393668 712 ntBASIC16.56■□□□□ 0.24
SLC25A1P53007 CCK-203ENST00000434608 747 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
SLC25A1P53007 AL691442.1-201ENST00000505139 1042 ntAPPRIS P1 TSL 2 BASIC16.56■□□□□ 0.24
SLC25A1P53007 IDUA-210ENST00000514224 2130 ntTSL 2 BASIC16.56■□□□□ 0.24
SLC25A1P53007 PTTG1-205ENST00000520452 895 ntAPPRIS P1 TSL 3 BASIC16.56■□□□□ 0.24
SLC25A1P53007 CNOT8-224ENST00000523698 862 ntTSL 2 BASIC16.56■□□□□ 0.24
SLC25A1P53007 LINC01301-204ENST00000530725 577 ntTSL 4 BASIC16.56■□□□□ 0.24
SLC25A1P53007 EFTUD1P1-201ENST00000558187 596 ntTSL 4 BASIC16.56■□□□□ 0.24
SLC25A1P53007 AC091551.1-201ENST00000590722 1228 ntAPPRIS P1 TSL 2 BASIC16.56■□□□□ 0.24
SLC25A1P53007 MMD2-204ENST00000612910 778 ntTSL 5 BASIC16.56■□□□□ 0.24
SLC25A1P53007 TSTD3-202ENST00000636394 336 ntAPPRIS ALT2 TSL 3 BASIC16.56■□□□□ 0.24
SLC25A1P53007 KCTD12-201ENST00000377474 6225 ntAPPRIS P1 BASIC16.56■□□□□ 0.24
SLC25A1P53007 AC008764.6-201ENST00000595909 2069 ntBASIC16.56■□□□□ 0.24
SLC25A1P53007 NR4A2-204ENST00000409572 2878 ntAPPRIS P1 TSL 5 BASIC16.56■□□□□ 0.24
SLC25A1P53007 SCD5-201ENST00000273908 1995 ntTSL 2 BASIC16.56■□□□□ 0.24
SLC25A1P53007 FIBIN-201ENST00000318627 1938 ntAPPRIS P1 BASIC16.56■□□□□ 0.24
SLC25A1P53007 SCYL1-203ENST00000420247 2583 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
SLC25A1P53007 BMS1P4-202ENST00000584747 1716 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
SLC25A1P53007 RRP7BP-201ENST00000357802 2375 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 39.6 ms