Protein–RNA interactions for Protein: P51571

SSR4, Translocon-associated protein subunit delta, humanhuman

Predictions only

Length 173 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSR4P51571 AL157888.1-201ENST00000631930 593 ntBASIC17.11■□□□□ 0.33
SSR4P51571 SMIM29-209ENST00000636500 1186 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
SSR4P51571 RNF113B-201ENST00000267291 1376 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
SSR4P51571 JPH2-201ENST00000342272 1923 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
SSR4P51571 ST3GAL4-217ENST00000534083 1919 ntAPPRIS ALT1 TSL 5 BASIC17.11■□□□□ 0.33
SSR4P51571 ZDHHC2-201ENST00000262096 6377 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
SSR4P51571 UNG-202ENST00000336865 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
SSR4P51571 ZNF346-201ENST00000358149 2314 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
SSR4P51571 TFRC-202ENST00000392396 5032 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
SSR4P51571 NFYC-AS1-201ENST00000606277 1687 ntBASIC17.1■□□□□ 0.33
SSR4P51571 COL13A1-201ENST00000354547 3027 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
SSR4P51571 CWH43-201ENST00000226432 2472 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
SSR4P51571 WNT10A-201ENST00000258411 2547 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
SSR4P51571 PPP1CC-201ENST00000335007 2559 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
SSR4P51571 C16orf59-210ENST00000569496 1911 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
SSR4P51571 TRIM7-205ENST00000422067 1954 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
SSR4P51571 MMP28-204ENST00000615136 2033 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
SSR4P51571 MCUR1-201ENST00000379170 5471 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
SSR4P51571 SYCE1L-201ENST00000378644 858 ntAPPRIS P2 TSL 5 BASIC17.1■□□□□ 0.33
SSR4P51571 SLC12A4-202ENST00000422611 4670 ntTSL 2 BASIC17.1■□□□□ 0.33
SSR4P51571 HELT-202ENST00000505610 846 ntAPPRIS ALT1 TSL 1 (best) BASIC17.1■□□□□ 0.33
SSR4P51571 FAM86EP-206ENST00000510506 987 ntBASIC17.1■□□□□ 0.33
SSR4P51571 NBPF14-202ENST00000593495 1082 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
SSR4P51571 AC083849.1-201ENST00000615227 514 ntBASIC17.1■□□□□ 0.33
SSR4P51571 HYMAI.1-201ENST00000620949 238 ntBASIC17.1■□□□□ 0.33
SSR4P51571 AP000550.4-202ENST00000639755 178 ntBASIC17.1■□□□□ 0.33
SSR4P51571 BSCL2-201ENST00000278893 1364 ntAPPRIS ALT2 TSL 2 BASIC17.1■□□□□ 0.33
SSR4P51571 ADARB1-201ENST00000348831 6882 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
SSR4P51571 MMD2-201ENST00000401401 2335 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
SSR4P51571 JMJD4-202ENST00000438896 2502 ntTSL 2 BASIC17.1■□□□□ 0.33
SSR4P51571 MTMR9LP-203ENST00000426597 1545 ntBASIC17.1■□□□□ 0.33
SSR4P51571 MRAS-204ENST00000464896 1534 ntTSL 2 BASIC17.1■□□□□ 0.33
SSR4P51571 EDNRA-206ENST00000511804 1569 ntTSL 2 BASIC17.1■□□□□ 0.33
SSR4P51571 ZNF655-202ENST00000320583 1601 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
SSR4P51571 TM7SF3-201ENST00000343028 2709 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
SSR4P51571 TNFSF9-201ENST00000245817 1665 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
SSR4P51571 CALHM3-201ENST00000369783 1652 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
SSR4P51571 ARL5A-201ENST00000295087 5326 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
SSR4P51571 ANKMY1-209ENST00000405523 1827 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
SSR4P51571 STXBP2-202ENST00000414284 1859 ntAPPRIS ALT1 TSL 1 (best) BASIC17.1■□□□□ 0.33
SSR4P51571 ESPN-205ENST00000461727 1869 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
SSR4P51571 AC013268.5-201ENST00000454928 1959 ntTSL 2 BASIC17.09■□□□□ 0.33
SSR4P51571 CPEB2-202ENST00000345451 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
SSR4P51571 DLK2-201ENST00000357338 2038 ntAPPRIS P3 TSL 2 BASIC17.09■□□□□ 0.33
SSR4P51571 CMTM4-201ENST00000330687 3414 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
SSR4P51571 DNAJC28-204ENST00000617313 2237 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
SSR4P51571 SHOX2-203ENST00000441443 3038 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
SSR4P51571 GRK2-201ENST00000308595 3466 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
SSR4P51571 C20orf196-201ENST00000303142 1154 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
SSR4P51571 TYMSOS-201ENST00000323813 844 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
SSR4P51571 PCED1CP-201ENST00000419887 785 ntBASIC17.09■□□□□ 0.33
SSR4P51571 AC087623.2-201ENST00000528407 534 ntTSL 4 BASIC17.09■□□□□ 0.33
SSR4P51571 AC020558.2-201ENST00000582325 795 ntTSL 3 BASIC17.09■□□□□ 0.33
SSR4P51571 IER3-202ENST00000376377 1350 ntBASIC17.09■□□□□ 0.33
SSR4P51571 C1QTNF1-209ENST00000581774 1368 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
SSR4P51571 TMEM106C-202ENST00000429772 1515 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
SSR4P51571 MFSD1-201ENST00000264266 1594 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
SSR4P51571 ACVR1B-205ENST00000541224 1791 ntTSL 2 BASIC17.09■□□□□ 0.33
SSR4P51571 RNF135-201ENST00000324689 1905 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
SSR4P51571 PGS1-201ENST00000262764 2201 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
SSR4P51571 FBXO24-201ENST00000241071 2276 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
SSR4P51571 PCDHA4-201ENST00000378125 2328 ntTSL 5 BASIC17.09■□□□□ 0.33
SSR4P51571 ERCC2-203ENST00000391944 2334 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
SSR4P51571 COL9A3-201ENST00000343916 2485 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
SSR4P51571 TBX21-201ENST00000177694 2572 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
SSR4P51571 SLMAP-201ENST00000295951 5433 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
SSR4P51571 KCNMA1-278ENST00000640141 5705 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
SSR4P51571 ZBTB4-201ENST00000311403 5956 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
SSR4P51571 ARNT-202ENST00000358595 4887 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.33
SSR4P51571 SKOR2-202ENST00000425639 3899 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.33
SSR4P51571 UHRF1-203ENST00000615884 2651 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.33
SSR4P51571 FAM129C-201ENST00000332386 2222 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.33
SSR4P51571 REEP2-202ENST00000378339 2170 ntAPPRIS ALT1 TSL 1 (best) BASIC17.08■□□□□ 0.33
SSR4P51571 TNFSF11-203ENST00000398795 2199 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
SSR4P51571 AP5S1-202ENST00000379567 1791 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.33
SSR4P51571 TEPSIN-213ENST00000637944 1782 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.33
SSR4P51571 AGO3-202ENST00000324350 1726 ntTSL 2 BASIC17.08■□□□□ 0.32
SSR4P51571 CAB39-202ENST00000409788 1626 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.32
SSR4P51571 CYP51A1P1-201ENST00000492267 1507 ntBASIC17.08■□□□□ 0.32
SSR4P51571 WFDC1-203ENST00000568638 1319 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.32
SSR4P51571 HBZP1-201ENST00000354915 429 ntBASIC17.08■□□□□ 0.32
SSR4P51571 TSPY8-203ENST00000383005 435 ntTSL 5 BASIC17.08■□□□□ 0.32
SSR4P51571 AANAT-202ENST00000392492 1005 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
SSR4P51571 SMYD3-204ENST00000403792 1209 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
SSR4P51571 AC092597.1-201ENST00000487352 616 ntBASIC17.08■□□□□ 0.32
SSR4P51571 AL136038.3-201ENST00000561909 1096 ntBASIC17.08■□□□□ 0.32
SSR4P51571 AC009065.1-201ENST00000564055 1225 ntBASIC17.08■□□□□ 0.32
SSR4P51571 AC027682.5-201ENST00000567122 530 ntTSL 3 BASIC17.08■□□□□ 0.32
SSR4P51571 AC140504.1-202ENST00000568222 652 ntTSL 5 BASIC17.08■□□□□ 0.32
SSR4P51571 MIR3180-4-201ENST00000582223 153 ntBASIC17.08■□□□□ 0.32
SSR4P51571 AC015961.2-201ENST00000589281 701 ntTSL 3 BASIC17.08■□□□□ 0.32
SSR4P51571 IFNL4-202ENST00000616270 1132 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
SSR4P51571 CLN6-214ENST00000636314 442 ntTSL 3 BASIC17.08■□□□□ 0.32
SSR4P51571 RAX-202ENST00000334889 3197 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
SSR4P51571 SHANK1-202ENST00000359082 6459 ntTSL 5 BASIC17.08■□□□□ 0.32
SSR4P51571 PDE4DIP-214ENST00000479408 2746 ntTSL 5 BASIC17.08■□□□□ 0.32
SSR4P51571 VAV1-210ENST00000602142 2620 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
SSR4P51571 GATA5-201ENST00000252997 2595 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
SSR4P51571 GOSR2-226ENST00000639287 2367 ntTSL 5 BASIC17.08■□□□□ 0.32
SSR4P51571 ANKRD65-201ENST00000427211 1976 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 21.1 ms