Protein–RNA interactions for Protein: P35236

PTPN7, Tyrosine-protein phosphatase non-receptor type 7, humanhuman

Predictions only

Length 360 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7P35236 DGKI-202ENST00000424189 4163 ntAPPRIS ALT2 TSL 5 BASIC19.29■□□□□ 0.68
PTPN7P35236 SPNS3-201ENST00000355530 2133 ntAPPRIS P1 TSL 2 BASIC19.29■□□□□ 0.68
PTPN7P35236 SLC35A2-202ENST00000376512 903 ntTSL 2 BASIC19.29■□□□□ 0.68
PTPN7P35236 CTNNBIP1-204ENST00000400904 1206 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
PTPN7P35236 CA15P1-201ENST00000481698 905 ntBASIC19.29■□□□□ 0.68
PTPN7P35236 USP46-AS1-201ENST00000503051 1048 ntTSL 3 BASIC19.29■□□□□ 0.68
PTPN7P35236 AC091564.5-201ENST00000526456 820 ntTSL 4 BASIC19.29■□□□□ 0.68
PTPN7P35236 GBGT1-203ENST00000372040 1980 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
PTPN7P35236 LRRC27-201ENST00000344079 1809 ntAPPRIS ALT2 TSL 2 BASIC19.29■□□□□ 0.68
PTPN7P35236 PPP1R7-201ENST00000234038 2386 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
PTPN7P35236 SHKBP1-201ENST00000291842 2363 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
PTPN7P35236 ADORA1-202ENST00000337894 2919 ntAPPRIS P1 TSL 2 BASIC19.29■□□□□ 0.68
PTPN7P35236 SLC39A3-202ENST00000455372 2940 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
PTPN7P35236 UBE3C-201ENST00000348165 5229 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
PTPN7P35236 SMN2-202ENST00000380742 1388 ntAPPRIS ALT2 TSL 5 BASIC19.29■□□□□ 0.68
PTPN7P35236 ACYP2-203ENST00000406041 1913 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
PTPN7P35236 NRBP1-203ENST00000379852 2163 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
PTPN7P35236 DSCR9-201ENST00000454482 1644 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
PTPN7P35236 PTK6-201ENST00000217185 2401 ntTSL 2 BASIC19.29■□□□□ 0.68
PTPN7P35236 ITPK1-202ENST00000354313 2803 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
PTPN7P35236 MCTP1-218ENST00000515393 5396 ntAPPRIS P3 TSL 1 (best) BASIC19.29■□□□□ 0.68
PTPN7P35236 IFNLR1-202ENST00000327575 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
PTPN7P35236 OGFOD2-222ENST00000545317 1481 ntTSL 2 BASIC19.28■□□□□ 0.68
PTPN7P35236 AC093677.2-201ENST00000600169 1863 ntBASIC19.28■□□□□ 0.68
PTPN7P35236 BAIAP2L2-202ENST00000381669 2146 ntAPPRIS P2 TSL 1 (best) BASIC19.28■□□□□ 0.68
PTPN7P35236 MROH1-202ENST00000423230 1712 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
PTPN7P35236 SLC29A4-202ENST00000396872 5685 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
PTPN7P35236 LONRF1-208ENST00000533751 3043 ntTSL 5 BASIC19.28■□□□□ 0.68
PTPN7P35236 FAM110D-201ENST00000374268 2858 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
PTPN7P35236 SNAI3-AS1-202ENST00000563475 2081 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
PTPN7P35236 STX11-201ENST00000367568 1926 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
PTPN7P35236 NPEPL1-204ENST00000525967 1917 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
PTPN7P35236 FOXP4-202ENST00000373057 3300 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
PTPN7P35236 LRRC25-201ENST00000339007 2415 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
PTPN7P35236 MCCC1-214ENST00000610757 2410 ntTSL 5 BASIC19.28■□□□□ 0.68
PTPN7P35236 TNNC1-201ENST00000232975 714 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
PTPN7P35236 GAMT-201ENST00000252288 1121 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
PTPN7P35236 AC012618.2-201ENST00000428058 849 ntBASIC19.28■□□□□ 0.68
PTPN7P35236 MFAP1P1-201ENST00000442257 1255 ntBASIC19.28■□□□□ 0.68
PTPN7P35236 TSPY20P-201ENST00000450910 630 ntBASIC19.28■□□□□ 0.68
PTPN7P35236 MRPL2-207ENST00000487429 905 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
PTPN7P35236 BNIP3L-206ENST00000523515 915 ntTSL 2 BASIC19.28■□□□□ 0.68
PTPN7P35236 AC027682.2-201ENST00000563083 336 ntTSL 5 BASIC19.28■□□□□ 0.68
PTPN7P35236 AL024498.1-202ENST00000606652 480 ntTSL 2 BASIC19.28■□□□□ 0.68
PTPN7P35236 EIF2B5-201ENST00000273783 2655 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
PTPN7P35236 AC022916.1-201ENST00000590478 2658 ntTSL 2 BASIC19.28■□□□□ 0.68
PTPN7P35236 EFEMP2-210ENST00000528176 1504 ntTSL 5 BASIC19.28■□□□□ 0.68
PTPN7P35236 RIOX2-201ENST00000333396 5347 ntAPPRIS ALT1 TSL 1 (best) BASIC19.28■□□□□ 0.68
PTPN7P35236 PCBP4-210ENST00000471622 1784 ntTSL 5 BASIC19.28■□□□□ 0.68
PTPN7P35236 SEC14L2-215ENST00000617837 2632 ntTSL 2 BASIC19.28■□□□□ 0.68
PTPN7P35236 SLC35E4-201ENST00000343605 2714 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
PTPN7P35236 PCCA-202ENST00000376285 2494 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
PTPN7P35236 RARRES1-201ENST00000237696 1952 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
PTPN7P35236 ERLIN1-203ENST00000421367 5792 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
PTPN7P35236 ZNF302-206ENST00000505242 2849 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
PTPN7P35236 AC127496.1-202ENST00000573602 2091 ntTSL 2 BASIC19.28■□□□□ 0.68
PTPN7P35236 KIF16B-206ENST00000636835 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
PTPN7P35236 ERICH1-201ENST00000262109 1813 ntAPPRIS P2 TSL 1 (best) BASIC19.28■□□□□ 0.68
PTPN7P35236 AC142086.1-202ENST00000398669 1839 ntTSL 2 BASIC19.28■□□□□ 0.68
PTPN7P35236 ENTPD6-202ENST00000360031 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
PTPN7P35236 TADA2B-204ENST00000512388 1343 ntTSL 5 BASIC19.27■□□□□ 0.68
PTPN7P35236 FAM58A-204ENST00000576892 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
PTPN7P35236 TXNL1-211ENST00000590954 1339 ntAPPRIS P1 TSL 2 BASIC19.27■□□□□ 0.68
PTPN7P35236 ZC3H12D-201ENST00000409806 5791 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
PTPN7P35236 GPAT2P1-201ENST00000444924 1672 ntBASIC19.27■□□□□ 0.68
PTPN7P35236 RNF121-201ENST00000361756 2625 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
PTPN7P35236 TXNRD3-203ENST00000524230 2950 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
PTPN7P35236 CORO6-212ENST00000584969 1416 ntAPPRIS ALT1 TSL 5 BASIC19.27■□□□□ 0.68
PTPN7P35236 PKN1-201ENST00000242783 3069 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
PTPN7P35236 NUDT4-202ENST00000415493 4839 ntAPPRIS ALT1 TSL 1 (best) BASIC19.27■□□□□ 0.68
PTPN7P35236 TFCP2-204ENST00000548115 1862 ntTSL 5 BASIC19.27■□□□□ 0.68
PTPN7P35236 C2CD2L-205ENST00000528586 2320 ntTSL 2 BASIC19.27■□□□□ 0.68
PTPN7P35236 APBB1-210ENST00000530885 1626 ntTSL 2 BASIC19.27■□□□□ 0.68
PTPN7P35236 LYPD1-201ENST00000345008 1033 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
PTPN7P35236 PMVK-201ENST00000368467 1280 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
PTPN7P35236 MCCD1P1-208ENST00000445732 328 ntBASIC19.27■□□□□ 0.68
PTPN7P35236 AC098590.1-201ENST00000468126 897 ntBASIC19.27■□□□□ 0.68
PTPN7P35236 WDR86-AS1-203ENST00000480632 704 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
PTPN7P35236 CERNA3-201ENST00000521403 557 ntTSL 3 BASIC19.27■□□□□ 0.68
PTPN7P35236 GRAMD1B-209ENST00000533341 707 ntTSL 2 BASIC19.27■□□□□ 0.68
PTPN7P35236 BX649632.1-201ENST00000610187 819 ntTSL 3 BASIC19.27■□□□□ 0.68
PTPN7P35236 AAED1-201ENST00000375234 2863 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
PTPN7P35236 GALE-201ENST00000374497 1488 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
PTPN7P35236 PMAIP1-202ENST00000316660 1948 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
PTPN7P35236 STYXL1-208ENST00000451157 1570 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
PTPN7P35236 KANSL1L-203ENST00000418791 3562 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
PTPN7P35236 RAPH1-211ENST00000457812 2673 ntAPPRIS ALT2 TSL 2 BASIC19.27■□□□□ 0.67
PTPN7P35236 CHRFAM7A-202ENST00000397827 2794 ntTSL 5 BASIC19.27■□□□□ 0.67
PTPN7P35236 SMARCC2-201ENST00000267064 4076 ntAPPRIS P4 TSL 1 (best) BASIC19.26■□□□□ 0.67
PTPN7P35236 ARID3C-201ENST00000378909 1411 ntAPPRIS P1 TSL 2 BASIC19.26■□□□□ 0.67
PTPN7P35236 CGRRF1-201ENST00000216420 2057 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
PTPN7P35236 USP39-201ENST00000323701 2177 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
PTPN7P35236 AMIGO1-202ENST00000369864 5088 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
PTPN7P35236 ISY1-201ENST00000273541 1704 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
PTPN7P35236 MSI2-203ENST00000416426 1714 ntTSL 2 BASIC19.26■□□□□ 0.67
PTPN7P35236 OSMR-202ENST00000502536 1740 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
PTPN7P35236 AC135776.1-201ENST00000319817 2481 ntBASIC19.26■□□□□ 0.67
PTPN7P35236 LYNX1-204ENST00000614491 4708 ntAPPRIS P1 TSL 2 BASIC19.26■□□□□ 0.67
PTPN7P35236 VIPR1-201ENST00000325123 2773 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
PTPN7P35236 TMTC1-203ENST00000539277 2758 ntAPPRIS P2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 59.9 ms