Protein–RNA interactions for Protein: P31327

CPS1, Carbamoyl-phosphate synthase [ammonia], mitochondrial, humanhuman

Predictions only

Length 1,500 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPS1P31327 CCS-201ENST00000310190 942 ntTSL 5 BASIC26.3■■□□□ 1.8
CPS1P31327 FTMT-201ENST00000321339 879 ntAPPRIS P1 BASIC26.3■■□□□ 1.8
CPS1P31327 GUK1-202ENST00000366716 940 ntAPPRIS P3 TSL 1 (best) BASIC26.3■■□□□ 1.8
CPS1P31327 C1QC-203ENST00000374640 1163 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
CPS1P31327 FAM99B-201ENST00000382166 1067 ntTSL 5 BASIC26.3■■□□□ 1.8
CPS1P31327 METTL21A-205ENST00000426075 1051 ntAPPRIS P1 TSL 2 BASIC26.3■■□□□ 1.8
CPS1P31327 AC002347.1-201ENST00000569543 541 ntBASIC26.3■■□□□ 1.8
CPS1P31327 SELENOM-210ENST00000611680 689 ntAPPRIS ALT2 TSL 5 BASIC26.3■■□□□ 1.8
CPS1P31327 SLC6A18-201ENST00000324642 2121 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
CPS1P31327 EFHD1-201ENST00000264059 2259 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
CPS1P31327 KLF2-201ENST00000248071 2018 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
CPS1P31327 TRIM13-206ENST00000457662 1489 ntAPPRIS P3 TSL 1 (best) BASIC26.3■■□□□ 1.8
CPS1P31327 SPHK1-203ENST00000545180 2238 ntAPPRIS P3 TSL 2 BASIC26.3■■□□□ 1.8
CPS1P31327 TBC1D10A-204ENST00000403477 1950 ntAPPRIS ALT2 TSL 2 BASIC26.3■■□□□ 1.8
CPS1P31327 NEU4-201ENST00000325935 2288 ntTSL 1 (best) BASIC26.3■■□□□ 1.8
CPS1P31327 CFAP97-205ENST00000514798 2895 ntTSL 1 (best) BASIC26.3■■□□□ 1.8
CPS1P31327 RAB1B-201ENST00000311481 2007 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
CPS1P31327 AC097532.1-201ENST00000440802 322 ntTSL 2 BASIC26.29■■□□□ 1.8
CPS1P31327 TMUB1-204ENST00000476627 882 ntAPPRIS P1 TSL 3 BASIC26.29■■□□□ 1.8
CPS1P31327 AC011840.4-201ENST00000578471 627 ntBASIC26.29■■□□□ 1.8
CPS1P31327 PBK-203ENST00000522944 1499 ntTSL 2 BASIC26.29■■□□□ 1.8
CPS1P31327 DVL3-203ENST00000431765 2294 ntTSL 5 BASIC26.29■■□□□ 1.8
CPS1P31327 PHOSPHO1-201ENST00000310544 1816 ntAPPRIS P1 TSL 2 BASIC26.29■■□□□ 1.8
CPS1P31327 GSPT1-203ENST00000439887 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC26.29■■□□□ 1.8
CPS1P31327 LPAR2-202ENST00000542587 2546 ntAPPRIS P1 TSL 2 BASIC26.29■■□□□ 1.8
CPS1P31327 SLC35A3-208ENST00000638336 2438 ntTSL 1 (best) BASIC26.29■■□□□ 1.8
CPS1P31327 SNRPN-207ENST00000554227 1763 ntTSL 5 BASIC26.29■■□□□ 1.8
CPS1P31327 CACNG7-201ENST00000222212 1016 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
CPS1P31327 HS6ST1P1-201ENST00000481504 1234 ntBASIC26.29■■□□□ 1.8
CPS1P31327 RLN3-202ENST00000585987 541 ntTSL 1 (best) BASIC26.29■■□□□ 1.8
CPS1P31327 MARCH2-206ENST00000601283 747 ntTSL 3 BASIC26.29■■□□□ 1.8
CPS1P31327 AP001269.4-201ENST00000609611 512 ntBASIC26.29■■□□□ 1.8
CPS1P31327 ULK3-217ENST00000568667 1470 ntTSL 5 BASIC26.28■■□□□ 1.8
CPS1P31327 OGG1-202ENST00000302008 2191 ntAPPRIS ALT2 TSL 5 BASIC26.28■■□□□ 1.8
CPS1P31327 KIF22-203ENST00000561482 2505 ntTSL 2 BASIC26.28■■□□□ 1.8
CPS1P31327 PVR-204ENST00000406449 1344 ntAPPRIS ALT2 TSL 1 (best) BASIC26.28■■□□□ 1.8
CPS1P31327 LCAT-201ENST00000264005 1507 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
CPS1P31327 PAN3-AS1-201ENST00000563843 1351 ntBASIC26.28■■□□□ 1.8
CPS1P31327 IKBKG-207ENST00000611071 2103 ntAPPRIS P3 TSL 1 (best) BASIC26.28■■□□□ 1.8
CPS1P31327 CDC25B-202ENST00000340833 1978 ntAPPRIS ALT2 TSL 1 (best) BASIC26.28■■□□□ 1.8
CPS1P31327 SRSF4-201ENST00000373795 2387 ntAPPRIS P2 TSL 1 (best) BASIC26.28■■□□□ 1.8
CPS1P31327 UBXN1-201ENST00000294119 1291 ntTSL 1 (best) BASIC26.28■■□□□ 1.8
CPS1P31327 CLEC1B-201ENST00000298527 952 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
CPS1P31327 CDC26-201ENST00000374206 872 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
CPS1P31327 THAP5-204ENST00000438865 868 ntTSL 2 BASIC26.28■■□□□ 1.8
CPS1P31327 C5orf66-202ENST00000507641 547 ntTSL 3 BASIC26.28■■□□□ 1.8
CPS1P31327 PAM16-208ENST00000573553 722 ntTSL 2 BASIC26.28■■□□□ 1.8
CPS1P31327 AC244153.1-202ENST00000617855 482 ntTSL 3 BASIC26.28■■□□□ 1.8
CPS1P31327 SLC35B1-201ENST00000240333 1850 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
CPS1P31327 THEM6-201ENST00000336138 2259 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
CPS1P31327 C19orf66-201ENST00000253110 2117 ntAPPRIS P3 TSL 2 BASIC26.28■■□□□ 1.8
CPS1P31327 REM2-201ENST00000267396 1923 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
CPS1P31327 SIT1-204ENST00000618781 1317 ntAPPRIS ALT2 TSL 5 BASIC26.28■■□□□ 1.8
CPS1P31327 AL512353.2-201ENST00000448759 1962 ntBASIC26.27■■□□□ 1.8
CPS1P31327 DLK2-203ENST00000372488 1590 ntAPPRIS P3 TSL 1 (best) BASIC26.27■■□□□ 1.8
CPS1P31327 WNT10B-202ENST00000403957 1817 ntTSL 5 BASIC26.27■■□□□ 1.8
CPS1P31327 LRPPRC-202ENST00000409659 1610 ntTSL 5 BASIC26.27■■□□□ 1.8
CPS1P31327 GLIPR2-203ENST00000396613 1917 ntTSL 4 BASIC26.27■■□□□ 1.8
CPS1P31327 NUDT17-201ENST00000334513 1473 ntAPPRIS P1 TSL 5 BASIC26.27■■□□□ 1.8
CPS1P31327 KATNBL1P6-202ENST00000562413 1466 ntBASIC26.27■■□□□ 1.8
CPS1P31327 LGALS9C-201ENST00000328114 1730 ntAPPRIS P2 TSL 1 (best) BASIC26.27■■□□□ 1.8
CPS1P31327 HBZ-201ENST00000252951 755 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
CPS1P31327 CIB3-201ENST00000269878 711 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
CPS1P31327 PAXX-201ENST00000371620 812 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
CPS1P31327 SFTPD-201ENST00000372292 1281 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
CPS1P31327 MPIG6B-210ENST00000480039 790 ntAPPRIS ALT2 TSL 1 (best) BASIC26.27■■□□□ 1.8
CPS1P31327 MLF1-210ENST00000484955 1247 ntTSL 1 (best) BASIC26.27■■□□□ 1.8
CPS1P31327 TIMM17B-208ENST00000495490 939 ntTSL 5 BASIC26.27■■□□□ 1.8
CPS1P31327 NEK2-205ENST00000540251 1318 ntTSL 1 (best) BASIC26.27■■□□□ 1.8
CPS1P31327 ACOT2-204ENST00000613168 1553 ntAPPRIS P5 TSL 1 (best) BASIC26.27■■□□□ 1.8
CPS1P31327 FBXW8-201ENST00000309909 2343 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
CPS1P31327 KRT18-207ENST00000550600 1696 ntTSL 1 (best) BASIC26.26■■□□□ 1.8
CPS1P31327 FARSA-207ENST00000588025 2057 ntTSL 5 BASIC26.26■■□□□ 1.79
CPS1P31327 TMPRSS5-209ENST00000544634 1524 ntTSL 2 BASIC26.26■■□□□ 1.79
CPS1P31327 SLC35D3-201ENST00000331858 2359 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
CPS1P31327 UPK3A-202ENST00000396082 627 ntAPPRIS ALT2 TSL 1 (best) BASIC26.26■■□□□ 1.79
CPS1P31327 WBP2-203ENST00000433525 928 ntTSL 2 BASIC26.26■■□□□ 1.79
CPS1P31327 AC132008.2-207ENST00000454517 770 ntBASIC26.26■■□□□ 1.79
CPS1P31327 AC012363.1-201ENST00000455707 575 ntTSL 4 BASIC26.26■■□□□ 1.79
CPS1P31327 ENDOV-205ENST00000518644 625 ntTSL 4 BASIC26.26■■□□□ 1.79
CPS1P31327 PAX9-204ENST00000554201 1289 ntTSL 2 BASIC26.26■■□□□ 1.79
CPS1P31327 AC020661.1-201ENST00000503052 1584 ntTSL 1 (best) BASIC26.26■■□□□ 1.79
CPS1P31327 TPD52-211ENST00000519303 1594 ntTSL 1 (best) BASIC26.26■■□□□ 1.79
CPS1P31327 SUMF2-201ENST00000275607 1894 ntTSL 1 (best) BASIC26.26■■□□□ 1.79
CPS1P31327 Z82202.1-201ENST00000623446 1880 ntBASIC26.26■■□□□ 1.79
CPS1P31327 PKMYT1-201ENST00000262300 2171 ntTSL 1 (best) BASIC26.26■■□□□ 1.79
CPS1P31327 ADGRB2-204ENST00000398542 5176 ntTSL 5 BASIC26.26■■□□□ 1.79
CPS1P31327 RMND5B-201ENST00000313386 1929 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
CPS1P31327 MCIDAS-201ENST00000513312 1736 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
CPS1P31327 SLC12A2-202ENST00000343225 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC26.26■■□□□ 1.79
CPS1P31327 RIIAD1-201ENST00000326413 1772 ntTSL 2 BASIC26.26■■□□□ 1.79
CPS1P31327 DBX2-201ENST00000332700 2806 ntAPPRIS P1 TSL 2 BASIC26.26■■□□□ 1.79
CPS1P31327 GLB1-201ENST00000307363 2616 ntAPPRIS P4 TSL 1 (best) BASIC26.25■■□□□ 1.79
CPS1P31327 HAUS4-218ENST00000555986 1626 ntTSL 5 BASIC26.25■■□□□ 1.79
CPS1P31327 CSNK2B-203ENST00000375882 948 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
CPS1P31327 LINC00882-201ENST00000473636 710 ntTSL 3 BASIC26.25■■□□□ 1.79
CPS1P31327 AC013356.2-201ENST00000559730 729 ntTSL 3 BASIC26.25■■□□□ 1.79
CPS1P31327 AC092364.2-202ENST00000597012 1073 ntBASIC26.25■■□□□ 1.79
CPS1P31327 PCDHGC4-204ENST00000618371 812 ntTSL 3 BASIC26.25■■□□□ 1.79
CPS1P31327 AC008556.1-201ENST00000610908 2040 ntBASIC26.25■■□□□ 1.79
Retrieved 100 of 98,524 protein–RNA pairs in 25.8 ms