Protein–RNA interactions for Protein: P28566

HTR1E, 5-hydroxytryptamine receptor 1E, humanhuman

Predictions only

Length 365 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HTR1EP28566 C5orf30-203ENST00000515669 1573 ntAPPRIS P1 TSL 3 BASIC17.88■□□□□ 0.45
HTR1EP28566 RARRES1-201ENST00000237696 1952 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
HTR1EP28566 HARBI1-201ENST00000326737 1967 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
HTR1EP28566 SAMD11-210ENST00000616016 2391 ntTSL 5 BASIC17.88■□□□□ 0.45
HTR1EP28566 KCNQ2-218ENST00000629676 2399 ntTSL 5 BASIC17.88■□□□□ 0.45
HTR1EP28566 SLC39A5-201ENST00000266980 2031 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
HTR1EP28566 PTCRA-201ENST00000304672 1080 ntAPPRIS P3 TSL 1 (best) BASIC17.88■□□□□ 0.45
HTR1EP28566 TSTD1-201ENST00000318289 626 ntAPPRIS P3 TSL 1 (best) BASIC17.88■□□□□ 0.45
HTR1EP28566 PTCRA-202ENST00000441198 1005 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
HTR1EP28566 PTCRA-203ENST00000446507 759 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
HTR1EP28566 MLF2-210ENST00000542154 838 ntAPPRIS P1 TSL 5 BASIC17.88■□□□□ 0.45
HTR1EP28566 AC126696.3-202ENST00000570159 553 ntTSL 5 BASIC17.88■□□□□ 0.45
HTR1EP28566 SCYL1-203ENST00000420247 2583 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
HTR1EP28566 CD1E-205ENST00000368160 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
HTR1EP28566 TFCP2-205ENST00000549867 1727 ntTSL 5 BASIC17.88■□□□□ 0.45
HTR1EP28566 GABRD-205ENST00000638771 1707 ntAPPRIS ALT2 TSL 3 BASIC17.88■□□□□ 0.45
HTR1EP28566 MINPP1-201ENST00000371994 2183 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
HTR1EP28566 TXNL1-211ENST00000590954 1339 ntAPPRIS P1 TSL 2 BASIC17.88■□□□□ 0.45
HTR1EP28566 ZFC3H1-206ENST00000548100 1771 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
HTR1EP28566 QPCTL-202ENST00000366382 1814 ntTSL 2 BASIC17.88■□□□□ 0.45
HTR1EP28566 ARAP1-AS2-201ENST00000500163 1824 ntTSL 2 BASIC17.88■□□□□ 0.45
HTR1EP28566 AC067852.2-201ENST00000590513 2313 ntBASIC17.88■□□□□ 0.45
HTR1EP28566 TJP3-205ENST00000587686 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
HTR1EP28566 IL6R-208ENST00000622330 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
HTR1EP28566 MAFF-201ENST00000338483 2490 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
HTR1EP28566 KCNC4-204ENST00000438661 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
HTR1EP28566 KDM1A-202ENST00000400181 3059 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
HTR1EP28566 CPZ-201ENST00000315782 2136 ntAPPRIS P3 TSL 1 (best) BASIC17.87■□□□□ 0.45
HTR1EP28566 CAMKK2-207ENST00000404169 2116 ntAPPRIS P4 TSL 1 (best) BASIC17.87■□□□□ 0.45
HTR1EP28566 NAPRT-202ENST00000426292 1654 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
HTR1EP28566 VOPP1-201ENST00000285279 2962 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
HTR1EP28566 T-201ENST00000296946 2436 ntAPPRIS P1 TSL 5 BASIC17.87■□□□□ 0.45
HTR1EP28566 ANK1-206ENST00000348036 622 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
HTR1EP28566 AL133410.2-201ENST00000425499 696 ntTSL 5 BASIC17.87■□□□□ 0.45
HTR1EP28566 TSPY21P-201ENST00000433481 731 ntBASIC17.87■□□□□ 0.45
HTR1EP28566 TUBB8P6-201ENST00000436895 1288 ntBASIC17.87■□□□□ 0.45
HTR1EP28566 HGNC:18790-208ENST00000506380 798 ntAPPRIS P1 TSL 3 BASIC17.87■□□□□ 0.45
HTR1EP28566 SLC25A11-202ENST00000544061 952 ntTSL 3 BASIC17.87■□□□□ 0.45
HTR1EP28566 AL929601.1-201ENST00000551565 573 ntTSL 4 BASIC17.87■□□□□ 0.45
HTR1EP28566 AC009065.4-203ENST00000562838 535 ntTSL 2 BASIC17.87■□□□□ 0.45
HTR1EP28566 C17orf62-238ENST00000585064 1074 ntAPPRIS P1 TSL 2 BASIC17.87■□□□□ 0.45
HTR1EP28566 CROCCP2-205ENST00000639481 1296 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
HTR1EP28566 NPEPL1-204ENST00000525967 1917 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
HTR1EP28566 WIPF1-202ENST00000359761 2003 ntAPPRIS P2 TSL 1 (best) BASIC17.87■□□□□ 0.45
HTR1EP28566 KIFC3-201ENST00000379655 3427 ntAPPRIS P3 TSL 1 (best) BASIC17.87■□□□□ 0.45
HTR1EP28566 MAN1A1-201ENST00000368468 5014 ntAPPRIS P1 TSL 2 BASIC17.87■□□□□ 0.45
HTR1EP28566 DNLZ-202ENST00000371739 2934 ntTSL 5 BASIC17.87■□□□□ 0.45
HTR1EP28566 AKT1-211ENST00000554848 1595 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
HTR1EP28566 RBPMS-210ENST00000520191 1613 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
HTR1EP28566 SLC35F5-201ENST00000245680 4412 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
HTR1EP28566 PFN2-203ENST00000452853 1780 ntAPPRIS ALT1 TSL 1 (best) BASIC17.86■□□□□ 0.45
HTR1EP28566 TXNRD3-205ENST00000640797 1824 ntAPPRIS ALT2 TSL 2 BASIC17.86■□□□□ 0.45
HTR1EP28566 SLC12A4-201ENST00000316341 4765 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
HTR1EP28566 FIBIN-201ENST00000318627 1938 ntAPPRIS P1 BASIC17.86■□□□□ 0.45
HTR1EP28566 RASL11B-201ENST00000248706 1995 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
HTR1EP28566 TNPO2-203ENST00000450764 4993 ntAPPRIS ALT1 TSL 1 (best) BASIC17.86■□□□□ 0.45
HTR1EP28566 SNAI3-AS1-205ENST00000568633 2096 ntBASIC17.86■□□□□ 0.45
HTR1EP28566 AC008764.6-201ENST00000595909 2069 ntBASIC17.86■□□□□ 0.45
HTR1EP28566 APMAP-201ENST00000217456 2430 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
HTR1EP28566 NARFL-218ENST00000568545 2486 ntTSL 2 BASIC17.86■□□□□ 0.45
HTR1EP28566 HCRT-201ENST00000293330 577 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
HTR1EP28566 SAPCD2P4-201ENST00000424595 1171 ntBASIC17.86■□□□□ 0.45
HTR1EP28566 METTL21A-204ENST00000425132 869 ntTSL 2 BASIC17.86■□□□□ 0.45
HTR1EP28566 NDUFA13-203ENST00000503283 825 ntTSL 2 BASIC17.86■□□□□ 0.45
HTR1EP28566 AC026427.1-201ENST00000508993 555 ntTSL 3 BASIC17.86■□□□□ 0.45
HTR1EP28566 AC019257.1-201ENST00000517676 557 ntTSL 5 BASIC17.86■□□□□ 0.45
HTR1EP28566 NAAA-206ENST00000507956 1300 ntAPPRIS ALT2 TSL 2 BASIC17.86■□□□□ 0.45
HTR1EP28566 BRMS1L-201ENST00000216807 2657 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
HTR1EP28566 ENTPD6-209ENST00000433259 2654 ntTSL 5 BASIC17.86■□□□□ 0.45
HTR1EP28566 SCARB1-203ENST00000415380 2731 ntTSL 2 BASIC17.86■□□□□ 0.45
HTR1EP28566 SF1-203ENST00000377387 2947 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
HTR1EP28566 NXNL2-202ENST00000375855 1457 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
HTR1EP28566 HLA-G-205ENST00000428701 1578 ntAPPRIS P2 BASIC17.86■□□□□ 0.45
HTR1EP28566 MECP2-205ENST00000453960 1729 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
HTR1EP28566 PCDHA2-203ENST00000526136 5254 ntAPPRIS P2 TSL 1 (best) BASIC17.86■□□□□ 0.45
HTR1EP28566 MUTYH-202ENST00000355498 1776 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
HTR1EP28566 NCK2-205ENST00000451463 1795 ntTSL 2 BASIC17.86■□□□□ 0.45
HTR1EP28566 SHISA3-201ENST00000319234 1971 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
HTR1EP28566 CADPS2-208ENST00000615869 6066 ntAPPRIS ALT1 TSL 5 BASIC17.86■□□□□ 0.45
HTR1EP28566 AL590648.2-201ENST00000427949 2225 ntTSL 2 BASIC17.86■□□□□ 0.45
HTR1EP28566 CHTOP-201ENST00000368686 2250 ntTSL 2 BASIC17.86■□□□□ 0.45
HTR1EP28566 ARPC4-201ENST00000397261 2582 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
HTR1EP28566 IQSEC1-201ENST00000273221 5279 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
HTR1EP28566 PTP4A3-202ENST00000349124 2710 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
HTR1EP28566 CCDC120-204ENST00000597275 2752 ntAPPRIS P3 TSL 2 BASIC17.85■□□□□ 0.45
HTR1EP28566 RUSC2-202ENST00000455600 5636 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
HTR1EP28566 KDM4B-202ENST00000381759 3058 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
HTR1EP28566 BOD1L2-201ENST00000585477 3239 ntAPPRIS P1 BASIC17.85■□□□□ 0.45
HTR1EP28566 POMT2-201ENST00000261534 4876 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
HTR1EP28566 DCBLD2-201ENST00000326840 6122 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
HTR1EP28566 ISY1-201ENST00000273541 1704 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
HTR1EP28566 WNT1-201ENST00000293549 1185 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
HTR1EP28566 CMTM8-201ENST00000307526 1174 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
HTR1EP28566 EXOSC3-201ENST00000327304 1806 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
HTR1EP28566 FGF17-201ENST00000359441 1714 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
HTR1EP28566 IFI6-203ENST00000362020 828 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
HTR1EP28566 DCLK1-203ENST00000379892 2101 ntTSL 5 BASIC17.85■□□□□ 0.45
HTR1EP28566 TAPT1-201ENST00000405303 4591 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
HTR1EP28566 SMARCB1-204ENST00000407422 1643 ntAPPRIS ALT1 TSL 1 (best) BASIC17.85■□□□□ 0.45
HTR1EP28566 P4HB-203ENST00000439918 1502 ntTSL 5 BASIC17.85■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 43.5 ms