Protein–RNA interactions for Protein: P22223

CDH3, Cadherin-3, humanhuman

Predictions only

Length 829 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3P22223 GSTM4-201ENST00000326729 1321 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
CDH3P22223 TEX13A-202ENST00000609007 1349 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CDH3P22223 ISOC1-201ENST00000173527 1940 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CDH3P22223 CPQ-201ENST00000220763 1947 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CDH3P22223 HSF2-201ENST00000368455 2549 ntAPPRIS P3 TSL 1 (best) BASIC18.25■□□□□ 0.51
CDH3P22223 MELTF-202ENST00000296351 1650 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
CDH3P22223 IMPAD1-201ENST00000262644 7199 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CDH3P22223 HCK-207ENST00000520553 2101 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
CDH3P22223 TLNRD1-201ENST00000267984 4845 ntAPPRIS P1 BASIC18.25■□□□□ 0.51
CDH3P22223 DSCC1-201ENST00000313655 2314 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CDH3P22223 TNFRSF19-202ENST00000382258 1625 ntAPPRIS P4 TSL 1 (best) BASIC18.25■□□□□ 0.51
CDH3P22223 RNF144A-AS1-204ENST00000437589 618 ntTSL 2 BASIC18.25■□□□□ 0.51
CDH3P22223 OOEP-AS1-201ENST00000445350 463 ntTSL 3 BASIC18.25■□□□□ 0.51
CDH3P22223 ZNF706-204ENST00000518336 501 ntAPPRIS P1 TSL 4 BASIC18.25■□□□□ 0.51
CDH3P22223 PTP4A3-206ENST00000524028 963 ntTSL 5 BASIC18.25■□□□□ 0.51
CDH3P22223 CYB561D2-210ENST00000607121 1004 ntTSL 2 BASIC18.25■□□□□ 0.51
CDH3P22223 PCCA-201ENST00000376279 2418 ntTSL 2 BASIC18.25■□□□□ 0.51
CDH3P22223 RRS1-201ENST00000320270 1706 ntAPPRIS P1 BASIC18.25■□□□□ 0.51
CDH3P22223 GDF5OS-201ENST00000374375 1734 ntAPPRIS P1 TSL 2 BASIC18.25■□□□□ 0.51
CDH3P22223 FO681492.1-203ENST00000622861 1362 ntAPPRIS ALT2 TSL 5 BASIC18.25■□□□□ 0.51
CDH3P22223 ZBTB48-202ENST00000377674 2293 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CDH3P22223 SLC25A3-201ENST00000188376 1909 ntAPPRIS ALT1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CDH3P22223 SYT3-206ENST00000600079 2463 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CDH3P22223 AC005906.2-207ENST00000639005 1580 ntTSL 5 BASIC18.25■□□□□ 0.51
CDH3P22223 ZNF487-202ENST00000437590 2111 ntTSL 2 BASIC18.25■□□□□ 0.51
CDH3P22223 ZYG11A-203ENST00000612017 3682 ntTSL 5 BASIC18.25■□□□□ 0.51
CDH3P22223 KIAA1522-204ENST00000401073 5438 ntAPPRIS P3 TSL 2 BASIC18.24■□□□□ 0.51
CDH3P22223 MCCC1-215ENST00000629669 2316 ntTSL 5 BASIC18.24■□□□□ 0.51
CDH3P22223 SCFD2-204ENST00000611795 1320 ntTSL 5 BASIC18.24■□□□□ 0.51
CDH3P22223 GSTZ1-204ENST00000393734 1424 ntTSL 5 BASIC18.24■□□□□ 0.51
CDH3P22223 COLCA2-201ENST00000398035 1414 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
CDH3P22223 ACD-203ENST00000602320 1408 ntAPPRIS ALT2 TSL 5 BASIC18.24■□□□□ 0.51
CDH3P22223 HTR1E-201ENST00000305344 2052 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
CDH3P22223 RSPO4-201ENST00000217260 2707 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
CDH3P22223 TACSTD2-201ENST00000371225 2351 ntAPPRIS P1 BASIC18.24■□□□□ 0.51
CDH3P22223 PCCB-216ENST00000483687 1727 ntTSL 3 BASIC18.24■□□□□ 0.51
CDH3P22223 IQSEC1-201ENST00000273221 5279 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
CDH3P22223 TLE3-214ENST00000558939 6004 ntAPPRIS P4 TSL 1 (best) BASIC18.24■□□□□ 0.51
CDH3P22223 SLC5A10-204ENST00000395647 2140 ntTSL 2 BASIC18.24■□□□□ 0.51
CDH3P22223 AC099329.3-201ENST00000431549 602 ntAPPRIS P1 TSL 4 BASIC18.24■□□□□ 0.51
CDH3P22223 TYROBP-209ENST00000589517 415 ntAPPRIS ALT1 TSL 1 (best) BASIC18.24■□□□□ 0.51
CDH3P22223 AC009542.2-201ENST00000637483 1189 ntTSL 5 BASIC18.24■□□□□ 0.51
CDH3P22223 UNC5B-201ENST00000335350 6841 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
CDH3P22223 PPP1R7-207ENST00000407025 1592 ntAPPRIS P1 TSL 5 BASIC18.24■□□□□ 0.51
CDH3P22223 TPD52-211ENST00000519303 1594 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
CDH3P22223 KRCC1-201ENST00000347055 1753 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
CDH3P22223 ANXA8-208ENST00000611843 2174 ntTSL 2 BASIC18.24■□□□□ 0.51
CDH3P22223 LPCAT3-201ENST00000261407 2268 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
CDH3P22223 AMDHD1-201ENST00000266736 2260 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
CDH3P22223 RTBDN-201ENST00000322912 1328 ntAPPRIS P3 TSL 1 (best) BASIC18.23■□□□□ 0.51
CDH3P22223 ARFIP2-204ENST00000445086 1300 ntTSL 2 BASIC18.23■□□□□ 0.51
CDH3P22223 ELMOD1-206ENST00000531234 1832 ntTSL 2 BASIC18.23■□□□□ 0.51
CDH3P22223 PLD4-204ENST00000540372 2007 ntAPPRIS ALT2 TSL 2 BASIC18.23■□□□□ 0.51
CDH3P22223 NAA35-201ENST00000361671 2649 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
CDH3P22223 CCNJL-203ENST00000393977 3320 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
CDH3P22223 AP003071.5-201ENST00000641568 2695 ntAPPRIS P1 BASIC18.23■□□□□ 0.51
CDH3P22223 PLPBP-201ENST00000328195 2558 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
CDH3P22223 MAFF-206ENST00000538320 2458 ntAPPRIS P1 TSL 4 BASIC18.23■□□□□ 0.51
CDH3P22223 TINAGL1-201ENST00000271064 2187 ntAPPRIS P3 TSL 1 (best) BASIC18.23■□□□□ 0.51
CDH3P22223 PCID2-202ENST00000337344 1898 ntAPPRIS P1 TSL 2 BASIC18.23■□□□□ 0.51
CDH3P22223 GCGR-202ENST00000570996 1872 ntAPPRIS ALT2 TSL 2 BASIC18.23■□□□□ 0.51
CDH3P22223 CFP-203ENST00000396992 1592 ntAPPRIS P2 TSL 1 (best) BASIC18.23■□□□□ 0.51
CDH3P22223 CHMP4A-201ENST00000347519 1393 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
CDH3P22223 PTCRA-201ENST00000304672 1080 ntAPPRIS P3 TSL 1 (best) BASIC18.23■□□□□ 0.51
CDH3P22223 COMMD1-201ENST00000311832 911 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
CDH3P22223 CCK-201ENST00000334681 830 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
CDH3P22223 TMEM240-201ENST00000378733 718 ntAPPRIS P1 TSL 2 BASIC18.23■□□□□ 0.51
CDH3P22223 AC103564.1-201ENST00000437330 562 ntTSL 5 BASIC18.23■□□□□ 0.51
CDH3P22223 PTCRA-202ENST00000441198 1005 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
CDH3P22223 BX664615.1-201ENST00000443558 458 ntBASIC18.23■□□□□ 0.51
CDH3P22223 PTCRA-203ENST00000446507 759 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
CDH3P22223 C4orf32-201ENST00000309733 8901 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
CDH3P22223 TH-202ENST00000333684 1535 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
CDH3P22223 CXorf40A-208ENST00000434353 1524 ntAPPRIS ALT1 TSL 5 BASIC18.23■□□□□ 0.51
CDH3P22223 DHRS4-201ENST00000313250 1443 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
CDH3P22223 EPHX4-201ENST00000370383 1437 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
CDH3P22223 CLUH-201ENST00000435359 5224 ntAPPRIS P2 TSL 5 BASIC18.23■□□□□ 0.51
CDH3P22223 FKBP3-202ENST00000396062 1346 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
CDH3P22223 PGRMC2-208ENST00000613358 3783 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
CDH3P22223 FOXD4-201ENST00000382500 1974 ntAPPRIS P1 BASIC18.22■□□□□ 0.51
CDH3P22223 CASD1-201ENST00000297273 3942 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
CDH3P22223 SNRPN-207ENST00000554227 1763 ntTSL 5 BASIC18.22■□□□□ 0.51
CDH3P22223 SLC25A51-202ENST00000377716 1691 ntAPPRIS P1 TSL 3 BASIC18.22■□□□□ 0.51
CDH3P22223 C21orf58-205ENST00000397683 1674 ntAPPRIS ALT2 TSL 2 BASIC18.22■□□□□ 0.51
CDH3P22223 MCU-201ENST00000357157 2874 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
CDH3P22223 AAED1-201ENST00000375234 2863 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
CDH3P22223 ADAMTS9-202ENST00000459780 2871 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
CDH3P22223 LMNB1-202ENST00000395354 1572 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
CDH3P22223 CRYZL1-203ENST00000381540 1482 ntTSL 2 BASIC18.22■□□□□ 0.51
CDH3P22223 CYP2E1-205ENST00000463117 1912 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
CDH3P22223 AC012213.1-202ENST00000523422 449 ntTSL 3 BASIC18.22■□□□□ 0.51
CDH3P22223 RBM42-202ENST00000586618 771 ntTSL 3 BASIC18.22■□□□□ 0.51
CDH3P22223 TRAPPC6A-201ENST00000006275 805 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
CDH3P22223 SCPEP1-216ENST00000631024 444 ntTSL 5 BASIC18.22■□□□□ 0.51
CDH3P22223 FAM222A-202ENST00000538780 3294 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
CDH3P22223 LYNX1-204ENST00000614491 4708 ntAPPRIS P1 TSL 2 BASIC18.22■□□□□ 0.51
CDH3P22223 LRPPRC-202ENST00000409659 1610 ntTSL 5 BASIC18.22■□□□□ 0.51
CDH3P22223 TBC1D3P2-202ENST00000577902 1649 ntBASIC18.22■□□□□ 0.51
CDH3P22223 GORASP1-206ENST00000422110 2523 ntTSL 2 BASIC18.22■□□□□ 0.51
CDH3P22223 SNHG10-201ENST00000500370 1531 ntTSL 2 BASIC18.22■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 54.1 ms