Protein–RNA interactions for Protein: P20036

HLA-DPA1, HLA class II histocompatibility antigen, DP alpha 1 chain, humanhuman

Predictions only

Length 260 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPA1P20036 SMPD1-203ENST00000527275 2188 ntAPPRIS P3 TSL 2 BASIC18.82■□□□□ 0.6
HLA-DPA1P20036 SMARCC2-201ENST00000267064 4076 ntAPPRIS P4 TSL 1 (best) BASIC18.82■□□□□ 0.6
HLA-DPA1P20036 LYPD3-201ENST00000244333 1694 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
HLA-DPA1P20036 STRBP-201ENST00000348403 3337 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
HLA-DPA1P20036 NFKBIL1-201ENST00000376145 1401 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
HLA-DPA1P20036 AC114490.1-202ENST00000311990 1887 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
HLA-DPA1P20036 FBXL18-205ENST00000620087 2076 ntTSL 5 BASIC18.81■□□□□ 0.6
HLA-DPA1P20036 PRSS12-201ENST00000296498 4809 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
HLA-DPA1P20036 IFRD2-204ENST00000436390 2275 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
HLA-DPA1P20036 EXTL3-201ENST00000220562 6483 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
HLA-DPA1P20036 PCDHB14-202ENST00000624896 2367 ntTSL 2 BASIC18.81■□□□□ 0.6
HLA-DPA1P20036 NR1H2-210ENST00000598168 1915 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
HLA-DPA1P20036 CDHR4-201ENST00000343366 1188 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
HLA-DPA1P20036 TNNT3-206ENST00000381579 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
HLA-DPA1P20036 LTB-210ENST00000429299 897 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
HLA-DPA1P20036 PHB2-202ENST00000440277 996 ntTSL 5 BASIC18.81■□□□□ 0.6
HLA-DPA1P20036 AL451069.1-201ENST00000455414 634 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
HLA-DPA1P20036 KRT18P41-201ENST00000518924 1277 ntBASIC18.81■□□□□ 0.6
HLA-DPA1P20036 NDUFB10-202ENST00000543683 830 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
HLA-DPA1P20036 PRR29-205ENST00000579184 1052 ntAPPRIS ALT2 TSL 2 BASIC18.81■□□□□ 0.6
HLA-DPA1P20036 AL513523.10-201ENST00000623024 1186 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
HLA-DPA1P20036 EEF1AKMT2-201ENST00000368836 1462 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
HLA-DPA1P20036 ZGPAT-202ENST00000355969 1871 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
HLA-DPA1P20036 FAM72C-202ENST00000584486 2297 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
HLA-DPA1P20036 GTPBP3-222ENST00000600625 2493 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
HLA-DPA1P20036 EXOSC3-201ENST00000327304 1806 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
HLA-DPA1P20036 EPB41L4B-201ENST00000374557 4006 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
HLA-DPA1P20036 UBE2O-201ENST00000319380 5436 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
HLA-DPA1P20036 AP003356.1-202ENST00000517910 2770 ntTSL 2 BASIC18.81■□□□□ 0.6
HLA-DPA1P20036 CYTH1-209ENST00000589296 2159 ntTSL 5 BASIC18.81■□□□□ 0.6
HLA-DPA1P20036 MLF2-202ENST00000435120 1379 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
HLA-DPA1P20036 IGFBP7-AS1-201ENST00000499667 1389 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
HLA-DPA1P20036 SMC4-201ENST00000344722 5356 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
HLA-DPA1P20036 TMEM235-201ENST00000374946 2409 ntTSL 5 BASIC18.8■□□□□ 0.6
HLA-DPA1P20036 DIP2A-203ENST00000435722 2760 ntTSL 2 BASIC18.8■□□□□ 0.6
HLA-DPA1P20036 CD164L2-202ENST00000374027 1457 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
HLA-DPA1P20036 LRRC36-201ENST00000329956 2395 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
HLA-DPA1P20036 IRF7-202ENST00000348655 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
HLA-DPA1P20036 CRAT-202ENST00000393384 973 ntTSL 2 BASIC18.8■□□□□ 0.6
HLA-DPA1P20036 HYAL3-203ENST00000415204 959 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
HLA-DPA1P20036 CYB561D2-204ENST00000424512 1212 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
HLA-DPA1P20036 FBXO32-202ENST00000443022 1227 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
HLA-DPA1P20036 NCAM1-AS1-201ENST00000526229 1081 ntTSL 2 BASIC18.8■□□□□ 0.6
HLA-DPA1P20036 AC079385.1-202ENST00000549203 569 ntTSL 4 BASIC18.8■□□□□ 0.6
HLA-DPA1P20036 AC004448.5-201ENST00000579897 567 ntTSL 5 BASIC18.8■□□□□ 0.6
HLA-DPA1P20036 ENTPD6-201ENST00000354989 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
HLA-DPA1P20036 DCLK2-207ENST00000635524 2153 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
HLA-DPA1P20036 CEP78-201ENST00000277082 2542 ntAPPRIS ALT2 TSL 2 BASIC18.8■□□□□ 0.6
HLA-DPA1P20036 TMEM179-201ENST00000341595 2513 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
HLA-DPA1P20036 ADAMTS9-202ENST00000459780 2871 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
HLA-DPA1P20036 FBXL20-202ENST00000394294 2309 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
HLA-DPA1P20036 ARID3C-201ENST00000378909 1411 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
HLA-DPA1P20036 CCDC34-201ENST00000317945 2109 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
HLA-DPA1P20036 KRT6C-201ENST00000252250 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
HLA-DPA1P20036 KRT6B-201ENST00000252252 2282 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
HLA-DPA1P20036 AC018755.2-202ENST00000429354 1926 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
HLA-DPA1P20036 SAMD14-203ENST00000503131 1938 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
HLA-DPA1P20036 USP49-202ENST00000373010 2446 ntTSL 5 BASIC18.8■□□□□ 0.6
HLA-DPA1P20036 ASXL1-202ENST00000375687 7031 ntAPPRIS P2 TSL 5 BASIC18.8■□□□□ 0.6
HLA-DPA1P20036 SAMD11-216ENST00000620200 1874 ntTSL 5 BASIC18.8■□□□□ 0.6
HLA-DPA1P20036 CYSTM1-201ENST00000261811 1336 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
HLA-DPA1P20036 LRRC27-203ENST00000368613 2113 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
HLA-DPA1P20036 AC034236.2-201ENST00000606662 1610 ntBASIC18.79■□□□□ 0.6
HLA-DPA1P20036 GAS7-205ENST00000542249 1799 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
HLA-DPA1P20036 GRM2-204ENST00000442933 2064 ntTSL 5 BASIC18.79■□□□□ 0.6
HLA-DPA1P20036 MPC2-201ENST00000271373 798 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
HLA-DPA1P20036 ZNF584-202ENST00000322834 1042 ntTSL 2 BASIC18.79■□□□□ 0.6
HLA-DPA1P20036 ING1-202ENST00000338450 1189 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
HLA-DPA1P20036 AIF1L-203ENST00000372298 849 ntTSL 3 BASIC18.79■□□□□ 0.6
HLA-DPA1P20036 TSPY1-201ENST00000423647 1171 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
HLA-DPA1P20036 AL954642.1-201ENST00000428088 538 ntTSL 3 BASIC18.79■□□□□ 0.6
HLA-DPA1P20036 ELP6-205ENST00000439305 880 ntTSL 2 BASIC18.79■□□□□ 0.6
HLA-DPA1P20036 ADCYAP1-202ENST00000450565 918 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
HLA-DPA1P20036 SLC25A11-202ENST00000544061 952 ntTSL 3 BASIC18.79■□□□□ 0.6
HLA-DPA1P20036 SIGLEC15-202ENST00000546268 1054 ntTSL 2 BASIC18.79■□□□□ 0.6
HLA-DPA1P20036 WWOX-216ENST00000569818 525 ntBASIC18.79■□□□□ 0.6
HLA-DPA1P20036 SUSD3-205ENST00000617293 1076 ntAPPRIS ALT2 TSL 3 BASIC18.79■□□□□ 0.6
HLA-DPA1P20036 MFSD10-205ENST00000507555 1573 ntTSL 5 BASIC18.79■□□□□ 0.6
HLA-DPA1P20036 AC036111.1-201ENST00000533973 1582 ntBASIC18.79■□□□□ 0.6
HLA-DPA1P20036 TFCP2-205ENST00000549867 1727 ntTSL 5 BASIC18.79■□□□□ 0.6
HLA-DPA1P20036 EIF5-201ENST00000216554 5945 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
HLA-DPA1P20036 AC135782.1-201ENST00000537498 2154 ntTSL 2 BASIC18.79■□□□□ 0.6
HLA-DPA1P20036 WT1-205ENST00000452863 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
HLA-DPA1P20036 POMT2-201ENST00000261534 4876 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
HLA-DPA1P20036 TICAM1-202ENST00000621756 1650 ntTSL 5 BASIC18.79■□□□□ 0.6
HLA-DPA1P20036 ATP6V1D-201ENST00000216442 1845 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
HLA-DPA1P20036 MEN1-205ENST00000377316 2868 ntTSL 5 BASIC18.79■□□□□ 0.6
HLA-DPA1P20036 SLC35B2-207ENST00000619636 2063 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
HLA-DPA1P20036 PEX16-202ENST00000378750 1335 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
HLA-DPA1P20036 FNBP1-202ENST00000420781 5410 ntAPPRIS ALT1 TSL 1 (best) BASIC18.78■□□□□ 0.6
HLA-DPA1P20036 LURAP1-201ENST00000371980 1854 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
HLA-DPA1P20036 TWF1-201ENST00000395510 3045 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
HLA-DPA1P20036 VPS26B-202ENST00000525095 1558 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
HLA-DPA1P20036 TM9SF1-206ENST00000528669 2425 ntTSL 5 BASIC18.78■□□□□ 0.6
HLA-DPA1P20036 ALDH5A1-201ENST00000348925 2266 ntAPPRIS P4 TSL 1 (best) BASIC18.78■□□□□ 0.6
HLA-DPA1P20036 CKS1B-203ENST00000368439 912 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
HLA-DPA1P20036 CACNA1B-205ENST00000371363 9758 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
HLA-DPA1P20036 GPR75-201ENST00000394705 2115 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
HLA-DPA1P20036 GXYLT1P3-201ENST00000453058 1193 ntBASIC18.78■□□□□ 0.6
HLA-DPA1P20036 ABHD11-207ENST00000458339 890 ntTSL 3 BASIC18.78■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 27 ms