Protein–RNA interactions for Protein: P16333

NCK1, Cytoplasmic protein NCK1, humanhuman

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCK1P16333 AC140725.1-202ENST00000561145 712 ntTSL 5 BASIC17.64■□□□□ 0.41
NCK1P16333 NCBP2-AS2-201ENST00000602845 918 ntAPPRIS P1 BASIC17.64■□□□□ 0.41
NCK1P16333 IKBKGP1-201ENST00000612193 1073 ntBASIC17.64■□□□□ 0.41
NCK1P16333 IL15RA-221ENST00000620865 1037 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
NCK1P16333 AP001273.2-201ENST00000638767 2993 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
NCK1P16333 MIPEP-201ENST00000382172 2400 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
NCK1P16333 APOA5-201ENST00000227665 1897 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
NCK1P16333 FBXO44-201ENST00000251546 1896 ntTSL 2 BASIC17.64■□□□□ 0.41
NCK1P16333 AP001476.1-201ENST00000451618 2198 ntTSL 2 BASIC17.64■□□□□ 0.41
NCK1P16333 ING5-201ENST00000313552 5196 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
NCK1P16333 ZNF133-211ENST00000538547 2245 ntTSL 2 BASIC17.64■□□□□ 0.41
NCK1P16333 FNBP1-201ENST00000355681 1977 ntTSL 2 BASIC17.64■□□□□ 0.41
NCK1P16333 RASL10B-201ENST00000603017 3205 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
NCK1P16333 ZNF517-201ENST00000359971 2335 ntAPPRIS P1 TSL 4 BASIC17.64■□□□□ 0.41
NCK1P16333 KBTBD11-201ENST00000320248 6710 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
NCK1P16333 PCCB-216ENST00000483687 1727 ntTSL 3 BASIC17.64■□□□□ 0.41
NCK1P16333 INPP4A-205ENST00000409851 3365 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
NCK1P16333 PDLIM3-202ENST00000284770 1766 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
NCK1P16333 RASSF1-201ENST00000327761 1757 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
NCK1P16333 CDK11A-203ENST00000357760 2446 ntAPPRIS ALT1 TSL 1 (best) BASIC17.63■□□□□ 0.41
NCK1P16333 CDK11A-204ENST00000358779 2419 ntAPPRIS ALT1 TSL 1 (best) BASIC17.63■□□□□ 0.41
NCK1P16333 CDK11A-206ENST00000378638 2429 ntTSL 5 BASIC17.63■□□□□ 0.41
NCK1P16333 CDK11A-208ENST00000404249 2449 ntAPPRIS P4 TSL 1 (best) BASIC17.63■□□□□ 0.41
NCK1P16333 RNF222-201ENST00000344001 2786 ntAPPRIS P1 BASIC17.63■□□□□ 0.41
NCK1P16333 RREB1-201ENST00000334984 5789 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
NCK1P16333 KCNQ5-212ENST00000628967 3527 ntTSL 2 BASIC17.63■□□□□ 0.41
NCK1P16333 EPB41L5-203ENST00000443124 2872 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
NCK1P16333 ANXA8L1-203ENST00000613703 1874 ntTSL 2 BASIC17.63■□□□□ 0.41
NCK1P16333 UNC5D-202ENST00000404895 3252 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
NCK1P16333 KCNA7-201ENST00000221444 4372 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
NCK1P16333 PLEKHM2-201ENST00000375793 4004 ntAPPRIS ALT2 TSL 5 BASIC17.63■□□□□ 0.41
NCK1P16333 TTLL9-205ENST00000375938 2623 ntAPPRIS P2 TSL 2 BASIC17.63■□□□□ 0.41
NCK1P16333 PIP4K2C-202ENST00000422156 1558 ntTSL 2 BASIC17.63■□□□□ 0.41
NCK1P16333 PABPC1L-217ENST00000537323 1910 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
NCK1P16333 PLIN2-201ENST00000276914 1972 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
NCK1P16333 SMPD4-202ENST00000409031 4896 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
NCK1P16333 ST8SIA5-201ENST00000315087 2716 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
NCK1P16333 IZUMO2-201ENST00000293405 728 ntAPPRIS P2 TSL 1 (best) BASIC17.63■□□□□ 0.41
NCK1P16333 COA6-202ENST00000366613 641 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
NCK1P16333 PSEN1-203ENST00000394157 1249 ntTSL 2 BASIC17.63■□□□□ 0.41
NCK1P16333 GRPEL2-202ENST00000416916 1006 ntTSL 2 BASIC17.63■□□□□ 0.41
NCK1P16333 AL161908.1-201ENST00000451449 449 ntTSL 2 BASIC17.63■□□□□ 0.41
NCK1P16333 AL359182.2-201ENST00000457720 606 ntTSL 3 BASIC17.63■□□□□ 0.41
NCK1P16333 SOX15-202ENST00000538513 1050 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
NCK1P16333 SOX15-203ENST00000570788 1093 ntBASIC17.63■□□□□ 0.41
NCK1P16333 AC006435.1-201ENST00000571775 1065 ntTSL 5 BASIC17.63■□□□□ 0.41
NCK1P16333 KLF2-202ENST00000592003 564 ntTSL 3 BASIC17.63■□□□□ 0.41
NCK1P16333 C14orf180-202ENST00000410013 2009 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
NCK1P16333 CCT7-215ENST00000539919 2031 ntTSL 2 BASIC17.63■□□□□ 0.41
NCK1P16333 TMEM230-206ENST00000379283 1660 ntAPPRIS P1 TSL 3 BASIC17.63■□□□□ 0.41
NCK1P16333 CHRD-202ENST00000348986 3155 ntAPPRIS ALT2 TSL 5 BASIC17.63■□□□□ 0.41
NCK1P16333 CYP2D7-203ENST00000433992 1740 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
NCK1P16333 BMS1P4-202ENST00000584747 1716 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
NCK1P16333 KCNQ2-207ENST00000370224 3004 ntTSL 5 BASIC17.63■□□□□ 0.41
NCK1P16333 UNC119-202ENST00000335765 1424 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
NCK1P16333 ENC1-201ENST00000302351 5520 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
NCK1P16333 AP003071.5-201ENST00000641568 2695 ntAPPRIS P1 BASIC17.63■□□□□ 0.41
NCK1P16333 DISP3-202ENST00000304391 1495 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
NCK1P16333 KATNBL1P6-202ENST00000562413 1466 ntBASIC17.63■□□□□ 0.41
NCK1P16333 RNF135-201ENST00000324689 1905 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
NCK1P16333 C1orf159-204ENST00000379339 2429 ntAPPRIS ALT2 TSL 2 BASIC17.62■□□□□ 0.41
NCK1P16333 SGSM2-202ENST00000426855 4734 ntAPPRIS ALT1 TSL 1 (best) BASIC17.62■□□□□ 0.41
NCK1P16333 TSPAN3-210ENST00000561277 1592 ntTSL 5 BASIC17.62■□□□□ 0.41
NCK1P16333 FAM83A-205ENST00000522648 1604 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
NCK1P16333 OLFM2-203ENST00000590841 1665 ntTSL 2 BASIC17.62■□□□□ 0.41
NCK1P16333 CLN3-204ENST00000357857 1720 ntTSL 2 BASIC17.62■□□□□ 0.41
NCK1P16333 MSI2-203ENST00000416426 1714 ntTSL 2 BASIC17.62■□□□□ 0.41
NCK1P16333 RPS6KA5-201ENST00000418736 2249 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
NCK1P16333 AC106820.2-201ENST00000563775 3264 ntBASIC17.62■□□□□ 0.41
NCK1P16333 CDC42EP5-201ENST00000301200 864 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
NCK1P16333 FKBP2-202ENST00000394540 1002 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
NCK1P16333 AC137630.1-201ENST00000452042 782 ntTSL 4 BASIC17.62■□□□□ 0.41
NCK1P16333 TTTY14-205ENST00000454875 544 ntTSL 2 BASIC17.62■□□□□ 0.41
NCK1P16333 CTBP1-AS2-203ENST00000507044 739 ntTSL 3 BASIC17.62■□□□□ 0.41
NCK1P16333 AP001458.2-201ENST00000528405 577 ntAPPRIS P1 TSL 4 BASIC17.62■□□□□ 0.41
NCK1P16333 CAMTA1-216ENST00000557126 486 ntTSL 2 BASIC17.62■□□□□ 0.41
NCK1P16333 SNAP23-210ENST00000564153 775 ntTSL 2 BASIC17.62■□□□□ 0.41
NCK1P16333 AC060766.5-201ENST00000590539 871 ntBASIC17.62■□□□□ 0.41
NCK1P16333 AL121832.2-201ENST00000610979 668 ntBASIC17.62■□□□□ 0.41
NCK1P16333 AC068587.9-201ENST00000641814 219 ntBASIC17.62■□□□□ 0.41
NCK1P16333 ADAMTS7-201ENST00000388820 5490 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
NCK1P16333 SETD3-202ENST00000331768 2878 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
NCK1P16333 CALHM2-201ENST00000260743 1859 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
NCK1P16333 SLX1B-SULT1A4-201ENST00000344620 2424 ntTSL 2 BASIC17.62■□□□□ 0.41
NCK1P16333 SQSTM1-202ENST00000389805 2986 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
NCK1P16333 ALDH3A1-206ENST00000457500 1925 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
NCK1P16333 LGALS9C-209ENST00000581545 1378 ntTSL 5 BASIC17.62■□□□□ 0.41
NCK1P16333 CD8B-203ENST00000390655 1417 ntAPPRIS P2 TSL 1 (best) BASIC17.62■□□□□ 0.41
NCK1P16333 PDE3B-201ENST00000282096 6076 ntAPPRIS P2 TSL 1 (best) BASIC17.62■□□□□ 0.41
NCK1P16333 SMPD3-211ENST00000568373 2073 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
NCK1P16333 SRMS-201ENST00000217188 1516 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
NCK1P16333 CDH24-204ENST00000487137 3438 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
NCK1P16333 DTWD1-202ENST00000403028 1584 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
NCK1P16333 HHIPL1-201ENST00000330710 7390 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
NCK1P16333 PRRT1-202ENST00000375150 1726 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
NCK1P16333 HOTAIR-201ENST00000424518 2421 ntTSL 5 BASIC17.61■□□□□ 0.41
NCK1P16333 TADA3-202ENST00000343450 2554 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
NCK1P16333 GNAS-203ENST00000306120 1878 ntBASIC17.61■□□□□ 0.41
NCK1P16333 AC093677.2-201ENST00000600169 1863 ntBASIC17.61■□□□□ 0.41
NCK1P16333 ARNTL-205ENST00000403510 2745 ntTSL 2 BASIC17.61■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 27.2 ms