Protein–RNA interactions for Protein: P16234

PDGFRA, Platelet-derived growth factor receptor alpha, humanhuman

Predictions only

Length 1,089 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRAP16234 SEMA7A-203ENST00000543145 2304 ntTSL 2 BASIC19.56■□□□□ 0.72
PDGFRAP16234 QSOX2-201ENST00000358701 4530 ntAPPRIS P1 TSL 2 BASIC19.56■□□□□ 0.72
PDGFRAP16234 SLC22A17-204ENST00000397267 2455 ntAPPRIS P4 TSL 5 BASIC19.56■□□□□ 0.72
PDGFRAP16234 HSCB-201ENST00000216027 1114 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
PDGFRAP16234 CCDC34-201ENST00000317945 2109 ntAPPRIS P3 TSL 1 (best) BASIC19.56■□□□□ 0.72
PDGFRAP16234 MIR564-202ENST00000385049 94 ntBASIC19.56■□□□□ 0.72
PDGFRAP16234 AC012618.3-203ENST00000426044 917 ntTSL 2 BASIC19.56■□□□□ 0.72
PDGFRAP16234 SLC39A11-207ENST00000579732 1004 ntTSL 2 BASIC19.56■□□□□ 0.72
PDGFRAP16234 AC005363.2-201ENST00000618631 242 ntBASIC19.56■□□□□ 0.72
PDGFRAP16234 PRDM8-202ENST00000415738 3124 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
PDGFRAP16234 CTNNBL1-201ENST00000361383 1925 ntAPPRIS P2 TSL 1 (best) BASIC19.56■□□□□ 0.72
PDGFRAP16234 AC018755.2-202ENST00000429354 1926 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
PDGFRAP16234 TMEM109-201ENST00000227525 2413 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
PDGFRAP16234 SLMAP-201ENST00000295951 5433 ntAPPRIS P1 TSL 5 BASIC19.56■□□□□ 0.72
PDGFRAP16234 ADAP1-205ENST00000449296 2093 ntTSL 2 BASIC19.56■□□□□ 0.72
PDGFRAP16234 AK3-202ENST00000381809 2736 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
PDGFRAP16234 TFCP2-205ENST00000549867 1727 ntTSL 5 BASIC19.56■□□□□ 0.72
PDGFRAP16234 RNF146-203ENST00000368314 2369 ntAPPRIS ALT1 TSL 2 BASIC19.56■□□□□ 0.72
PDGFRAP16234 SAMD11-216ENST00000620200 1874 ntTSL 5 BASIC19.56■□□□□ 0.72
PDGFRAP16234 CARHSP1-219ENST00000618335 2972 ntAPPRIS P1 TSL 4 BASIC19.56■□□□□ 0.72
PDGFRAP16234 SAAL1-201ENST00000300013 1518 ntAPPRIS ALT1 TSL 2 BASIC19.56■□□□□ 0.72
PDGFRAP16234 ZBTB33-202ENST00000557385 2346 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
PDGFRAP16234 LYPD3-201ENST00000244333 1694 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
PDGFRAP16234 RNF139-201ENST00000303545 2637 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
PDGFRAP16234 LRRC27-203ENST00000368613 2113 ntAPPRIS P3 TSL 1 (best) BASIC19.55■□□□□ 0.72
PDGFRAP16234 MAN1B1-207ENST00000535144 2296 ntTSL 2 BASIC19.55■□□□□ 0.72
PDGFRAP16234 FGFR3-202ENST00000340107 4293 ntAPPRIS ALT2 TSL 5 BASIC19.55■□□□□ 0.72
PDGFRAP16234 TFAP4-201ENST00000204517 2215 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
PDGFRAP16234 C1orf198-201ENST00000366663 3858 ntAPPRIS P3 TSL 1 (best) BASIC19.55■□□□□ 0.72
PDGFRAP16234 CTSH-201ENST00000220166 2190 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
PDGFRAP16234 ZNF584-202ENST00000322834 1042 ntTSL 2 BASIC19.55■□□□□ 0.72
PDGFRAP16234 ERICH4-201ENST00000378187 946 ntAPPRIS P1 TSL 5 BASIC19.55■□□□□ 0.72
PDGFRAP16234 RCN1P1-201ENST00000400413 996 ntBASIC19.55■□□□□ 0.72
PDGFRAP16234 CYB561D2-204ENST00000424512 1212 ntAPPRIS P1 TSL 5 BASIC19.55■□□□□ 0.72
PDGFRAP16234 PKMYT1-203ENST00000431515 2308 ntTSL 2 BASIC19.55■□□□□ 0.72
PDGFRAP16234 RNF144A-AS1-204ENST00000437589 618 ntTSL 2 BASIC19.55■□□□□ 0.72
PDGFRAP16234 NFATC4-228ENST00000556759 2025 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
PDGFRAP16234 RAB11B-AS1-201ENST00000593581 1013 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
PDGFRAP16234 SIKE1-201ENST00000060969 2190 ntAPPRIS P3 TSL 1 (best) BASIC19.55■□□□□ 0.72
PDGFRAP16234 AC104581.1-202ENST00000635932 2618 ntBASIC19.55■□□□□ 0.72
PDGFRAP16234 CLN6-221ENST00000637494 765 ntTSL 5 BASIC19.55■□□□□ 0.72
PDGFRAP16234 ARHGAP11A-208ENST00000567348 2422 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
PDGFRAP16234 AC005082.1-201ENST00000413042 2259 ntBASIC19.55■□□□□ 0.72
PDGFRAP16234 USP48-204ENST00000400301 4309 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
PDGFRAP16234 GPR75-201ENST00000394705 2115 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
PDGFRAP16234 TIMM13-201ENST00000215570 1973 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
PDGFRAP16234 EXOSC3-201ENST00000327304 1806 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
PDGFRAP16234 ST3GAL3-206ENST00000351035 2377 ntTSL 5 BASIC19.55■□□□□ 0.72
PDGFRAP16234 NR1H2-210ENST00000598168 1915 ntAPPRIS ALT2 TSL 5 BASIC19.55■□□□□ 0.72
PDGFRAP16234 EI24-201ENST00000278903 2455 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
PDGFRAP16234 CDK11A-205ENST00000378633 2458 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
PDGFRAP16234 HSPB8-201ENST00000281938 2152 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
PDGFRAP16234 ATRIP-201ENST00000320211 2590 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
PDGFRAP16234 TTLL10-203ENST00000379290 2283 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
PDGFRAP16234 CLIP2-201ENST00000223398 5563 ntAPPRIS P1 TSL 5 BASIC19.54■□□□□ 0.72
PDGFRAP16234 IGFALS-202ENST00000415638 2136 ntTSL 2 BASIC19.54■□□□□ 0.72
PDGFRAP16234 SNAP47-201ENST00000315781 2367 ntAPPRIS P3 TSL 1 (best) BASIC19.54■□□□□ 0.72
PDGFRAP16234 TWIST2-202ENST00000612363 1404 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
PDGFRAP16234 ATP6V1D-201ENST00000216442 1845 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
PDGFRAP16234 MVB12A-201ENST00000317040 2223 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
PDGFRAP16234 AIF1L-203ENST00000372298 849 ntTSL 3 BASIC19.54■□□□□ 0.72
PDGFRAP16234 AC008105.2-201ENST00000420431 579 ntTSL 4 BASIC19.54■□□□□ 0.72
PDGFRAP16234 AC073343.2-202ENST00000430844 532 ntTSL 4 BASIC19.54■□□□□ 0.72
PDGFRAP16234 SLC25A3P1-201ENST00000443844 931 ntBASIC19.54■□□□□ 0.72
PDGFRAP16234 FAM210CP-201ENST00000445714 574 ntBASIC19.54■□□□□ 0.72
PDGFRAP16234 AL451069.1-201ENST00000455414 634 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
PDGFRAP16234 AC128688.1-201ENST00000487626 519 ntBASIC19.54■□□□□ 0.72
PDGFRAP16234 AC098829.1-201ENST00000502344 630 ntTSL 3 BASIC19.54■□□□□ 0.72
PDGFRAP16234 RAB2A-211ENST00000531289 1058 ntTSL 2 BASIC19.54■□□□□ 0.72
PDGFRAP16234 MIR3180-5-201ENST00000583743 153 ntBASIC19.54■□□□□ 0.72
PDGFRAP16234 AL513523.10-201ENST00000623024 1186 ntAPPRIS P1 TSL 5 BASIC19.54■□□□□ 0.72
PDGFRAP16234 AC010653.2-201ENST00000623505 997 ntBASIC19.54■□□□□ 0.72
PDGFRAP16234 TSSC4-201ENST00000333256 1686 ntAPPRIS P3 TSL 1 (best) BASIC19.54■□□□□ 0.72
PDGFRAP16234 ILK-203ENST00000420936 1692 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
PDGFRAP16234 EPB41L2-211ENST00000525271 2568 ntTSL 2 BASIC19.54■□□□□ 0.72
PDGFRAP16234 GAS2L1P2-202ENST00000442849 2262 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
PDGFRAP16234 CADPS-201ENST00000283269 4591 ntAPPRIS P4 TSL 1 (best) BASIC19.54■□□□□ 0.72
PDGFRAP16234 NFATC1-217ENST00000591814 4819 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
PDGFRAP16234 EEF1AKMT2-201ENST00000368836 1462 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
PDGFRAP16234 PCBP3-206ENST00000400314 2202 ntAPPRIS P2 TSL 5 BASIC19.53■□□□□ 0.72
PDGFRAP16234 LRRC20-205ENST00000395010 2959 ntTSL 3 BASIC19.53■□□□□ 0.72
PDGFRAP16234 UBE2I-203ENST00000397514 2976 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
PDGFRAP16234 TXNRD3-203ENST00000524230 2950 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
PDGFRAP16234 IRF7-202ENST00000348655 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
PDGFRAP16234 SH3BP2-202ENST00000435136 2318 ntAPPRIS P3 TSL 2 BASIC19.53■□□□□ 0.72
PDGFRAP16234 ANKS3-202ENST00000446014 2265 ntTSL 5 BASIC19.53■□□□□ 0.72
PDGFRAP16234 INTS11-249ENST00000618806 1523 ntTSL 2 BASIC19.53■□□□□ 0.72
PDGFRAP16234 AGTR1-201ENST00000349243 2356 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
PDGFRAP16234 NDUFA12-201ENST00000327772 635 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
PDGFRAP16234 AC138028.1-201ENST00000333666 2137 ntTSL 2 BASIC19.53■□□□□ 0.72
PDGFRAP16234 AC126763.1-201ENST00000552015 2118 ntBASIC19.53■□□□□ 0.72
PDGFRAP16234 AC010531.1-201ENST00000568879 953 ntAPPRIS P1 TSL 4 BASIC19.53■□□□□ 0.72
PDGFRAP16234 DEDD2-209ENST00000598727 1037 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
PDGFRAP16234 ST20-MTHFS-203ENST00000615374 679 ntAPPRIS P1 TSL 3 BASIC19.53■□□□□ 0.72
PDGFRAP16234 SUSD3-205ENST00000617293 1076 ntAPPRIS ALT2 TSL 3 BASIC19.53■□□□□ 0.72
PDGFRAP16234 PCDHA2-203ENST00000526136 5254 ntAPPRIS P2 TSL 1 (best) BASIC19.53■□□□□ 0.72
PDGFRAP16234 CDCA7L-203ENST00000406877 3066 ntAPPRIS P3 TSL 1 (best) BASIC19.53■□□□□ 0.72
PDGFRAP16234 PRKCI-201ENST00000295797 4950 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
PDGFRAP16234 MLF2-202ENST00000435120 1379 ntAPPRIS P1 TSL 2 BASIC19.53■□□□□ 0.72
PDGFRAP16234 KCNK4-205ENST00000538767 1389 ntTSL 2 BASIC19.53■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 28.2 ms