Protein–RNA interactions for Protein: P09326

CD48, CD48 antigen, humanhuman

Predictions only

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD48P09326 IFFO1-204ENST00000396840 2677 ntAPPRIS ALT1 TSL 5 BASIC19.35■□□□□ 0.69
CD48P09326 UBE2Q2-208ENST00000569423 2969 ntTSL 2 BASIC19.35■□□□□ 0.69
CD48P09326 KRT86-202ENST00000423955 2217 ntAPPRIS P1 TSL 2 BASIC19.35■□□□□ 0.69
CD48P09326 ARID4B-203ENST00000366603 5946 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
CD48P09326 CENPA-202ENST00000335756 1452 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
CD48P09326 LGI3-201ENST00000306317 3272 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
CD48P09326 DMRT3-201ENST00000190165 2183 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
CD48P09326 USP39-201ENST00000323701 2177 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
CD48P09326 KRT8P45-201ENST00000414328 1447 ntBASIC19.34■□□□□ 0.69
CD48P09326 DOC2A-208ENST00000564944 1782 ntAPPRIS P1 TSL 5 BASIC19.34■□□□□ 0.69
CD48P09326 TTLL3-209ENST00000426895 2767 ntAPPRIS P2 TSL 2 BASIC19.34■□□□□ 0.69
CD48P09326 PPP1R7-201ENST00000234038 2386 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
CD48P09326 MAPK9-201ENST00000343111 4369 ntTSL 5 BASIC19.34■□□□□ 0.69
CD48P09326 ZCCHC17-205ENST00000615916 1652 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
CD48P09326 TRIM41-202ENST00000351937 2696 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
CD48P09326 ADGRG2-210ENST00000379878 4803 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
CD48P09326 MIR1238-201ENST00000408483 83 ntBASIC19.34■□□□□ 0.69
CD48P09326 TMEM185A-204ENST00000507237 903 ntTSL 2 BASIC19.34■□□□□ 0.69
CD48P09326 FITM1-202ENST00000559294 800 ntBASIC19.34■□□□□ 0.69
CD48P09326 MIR4497-201ENST00000583208 89 ntBASIC19.34■□□□□ 0.69
CD48P09326 AC122129.2-201ENST00000583598 466 ntTSL 5 BASIC19.34■□□□□ 0.69
CD48P09326 SNX21-213ENST00000614929 587 ntTSL 5 BASIC19.34■□□□□ 0.69
CD48P09326 AL023803.3-201ENST00000615559 522 ntBASIC19.34■□□□□ 0.69
CD48P09326 EWSR1-207ENST00000406548 2207 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
CD48P09326 MTSS1L-204ENST00000616026 2241 ntAPPRIS ALT2 TSL 5 BASIC19.34■□□□□ 0.69
CD48P09326 VPS26B-202ENST00000525095 1558 ntAPPRIS P1 TSL 5 BASIC19.34■□□□□ 0.69
CD48P09326 TBC1D9-201ENST00000442267 5306 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
CD48P09326 GUCY1A2-201ENST00000282249 3047 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
CD48P09326 EPHA10-202ENST00000373048 5425 ntAPPRIS P2 TSL 5 BASIC19.34■□□□□ 0.69
CD48P09326 DPAGT1-203ENST00000409993 3274 ntAPPRIS P1 TSL 2 BASIC19.34■□□□□ 0.69
CD48P09326 TOX2-205ENST00000423191 1709 ntTSL 2 BASIC19.34■□□□□ 0.69
CD48P09326 PTPA-201ENST00000337738 2845 ntTSL 2 BASIC19.33■□□□□ 0.69
CD48P09326 OGFOD3-202ENST00000329197 1652 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
CD48P09326 TSSC4-201ENST00000333256 1686 ntAPPRIS P3 TSL 1 (best) BASIC19.33■□□□□ 0.69
CD48P09326 IRF5-202ENST00000357234 1680 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
CD48P09326 AC012615.6-201ENST00000593201 1697 ntTSL 2 BASIC19.33■□□□□ 0.69
CD48P09326 PLK1-201ENST00000300093 2227 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
CD48P09326 NCF1-201ENST00000289473 1396 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
CD48P09326 LRP3-201ENST00000253193 3807 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
CD48P09326 PARP15-202ENST00000464300 2156 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
CD48P09326 FAM69B-201ENST00000371691 2410 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
CD48P09326 PJA1-202ENST00000374571 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.69
CD48P09326 SHKBP1-201ENST00000291842 2363 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
CD48P09326 TXNRD3-202ENST00000523403 2351 ntAPPRIS ALT2 TSL 2 BASIC19.33■□□□□ 0.69
CD48P09326 MYC-207ENST00000621592 2366 ntAPPRIS ALT1 TSL 1 (best) BASIC19.33■□□□□ 0.69
CD48P09326 ATP5L-201ENST00000300688 1577 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
CD48P09326 DOK4-218ENST00000569548 1848 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
CD48P09326 TRABD-201ENST00000303434 2329 ntAPPRIS P3 TSL 1 (best) BASIC19.33■□□□□ 0.69
CD48P09326 CALML5-201ENST00000380332 859 ntAPPRIS P1 BASIC19.33■□□□□ 0.68
CD48P09326 DNPH1-202ENST00000393987 796 ntTSL 2 BASIC19.33■□□□□ 0.68
CD48P09326 MCCD1P1-208ENST00000445732 328 ntBASIC19.33■□□□□ 0.68
CD48P09326 AC134349.1-201ENST00000543969 385 ntTSL 3 BASIC19.33■□□□□ 0.68
CD48P09326 FOXN3-AS1-201ENST00000555562 1077 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
CD48P09326 AC099343.3-201ENST00000605834 2503 ntBASIC19.33■□□□□ 0.68
CD48P09326 AL390961.4-201ENST00000623958 2535 ntBASIC19.33■□□□□ 0.68
CD48P09326 ECE1-203ENST00000374893 2484 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
CD48P09326 HOXA11-AS-205ENST00000522863 1723 ntTSL 5 BASIC19.33■□□□□ 0.68
CD48P09326 FAM213B-202ENST00000378425 2665 ntAPPRIS ALT2 TSL 2 BASIC19.33■□□□□ 0.68
CD48P09326 ECHDC1-214ENST00000474289 2443 ntAPPRIS P3 TSL 5 BASIC19.33■□□□□ 0.68
CD48P09326 PRRT1-201ENST00000211413 1909 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
CD48P09326 TICAM1-202ENST00000621756 1650 ntTSL 5 BASIC19.33■□□□□ 0.68
CD48P09326 SNN-201ENST00000329565 3312 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
CD48P09326 PXK-206ENST00000463280 2825 ntTSL 2 BASIC19.33■□□□□ 0.68
CD48P09326 KCNC4-203ENST00000413138 3018 ntAPPRIS ALT2 TSL 5 BASIC19.33■□□□□ 0.68
CD48P09326 RENBP-202ENST00000393700 1388 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
CD48P09326 EDC3-214ENST00000568176 1825 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
CD48P09326 HCLS1-201ENST00000314583 2000 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
CD48P09326 PHKG2-202ENST00000424889 1566 ntTSL 2 BASIC19.32■□□□□ 0.68
CD48P09326 KCNN4-209ENST00000615047 2029 ntTSL 5 BASIC19.32■□□□□ 0.68
CD48P09326 CALM2-201ENST00000272298 1302 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
CD48P09326 AC027031.2-201ENST00000521369 1318 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
CD48P09326 SORCS2-203ENST00000507866 6152 ntAPPRIS P2 TSL 1 (best) BASIC19.32■□□□□ 0.68
CD48P09326 SPTBN4-207ENST00000595535 6105 ntTSL 5 BASIC19.32■□□□□ 0.68
CD48P09326 MINPP1-201ENST00000371994 2183 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
CD48P09326 OSMR-202ENST00000502536 1740 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
CD48P09326 PROB1-201ENST00000434752 5122 ntAPPRIS P1 BASIC19.32■□□□□ 0.68
CD48P09326 ENTPD6-202ENST00000360031 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
CD48P09326 COX5A-201ENST00000322347 1268 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
CD48P09326 SPDYE2-201ENST00000341656 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
CD48P09326 PHOSPHO2-201ENST00000359744 1125 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
CD48P09326 SPDYE2B-202ENST00000455020 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
CD48P09326 AC098864.1-204ENST00000513752 805 ntTSL 4 BASIC19.32■□□□□ 0.68
CD48P09326 MLF2-210ENST00000542154 838 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
CD48P09326 LINC02256-201ENST00000561999 366 ntTSL 3 BASIC19.32■□□□□ 0.68
CD48P09326 AP005263.1-201ENST00000579126 914 ntTSL 2 BASIC19.32■□□□□ 0.68
CD48P09326 BTG3-201ENST00000339775 1485 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
CD48P09326 KRT14-201ENST00000167586 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
CD48P09326 AL354751.1-201ENST00000412768 1863 ntBASIC19.32■□□□□ 0.68
CD48P09326 MARK2-203ENST00000377810 4560 ntAPPRIS ALT2 TSL 5 BASIC19.32■□□□□ 0.68
CD48P09326 CGRRF1-201ENST00000216420 2057 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
CD48P09326 LEFTY2-201ENST00000366820 2287 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
CD48P09326 SYT3-206ENST00000600079 2463 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
CD48P09326 CIZ1-226ENST00000629610 2855 ntAPPRIS ALT2 TSL 2 BASIC19.32■□□□□ 0.68
CD48P09326 KRT8P9-201ENST00000558927 1449 ntBASIC19.32■□□□□ 0.68
CD48P09326 SORBS3-221ENST00000523965 2028 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
CD48P09326 SEC14L2-215ENST00000617837 2632 ntTSL 2 BASIC19.32■□□□□ 0.68
CD48P09326 AC020763.4-201ENST00000623414 4170 ntBASIC19.32■□□□□ 0.68
CD48P09326 GATAD1-201ENST00000287957 3361 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
CD48P09326 EGFL6-201ENST00000361306 2398 ntAPPRIS P3 TSL 1 (best) BASIC19.32■□□□□ 0.68
CD48P09326 MUTYH-202ENST00000355498 1776 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 38.3 ms