Protein–RNA interactions for Protein: P07858

CTSB, Cathepsin B, humanhuman

Predictions only

Length 339 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTSBP07858 ABCD4-228ENST00000557588 763 ntTSL 3 BASIC17.67■□□□□ 0.42
CTSBP07858 NDUFV2-AS1-203ENST00000608008 779 ntBASIC17.67■□□□□ 0.42
CTSBP07858 FOXP4-205ENST00000409208 3341 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
CTSBP07858 RAVER2-201ENST00000294428 4398 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
CTSBP07858 MZF1-203ENST00000594234 2385 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
CTSBP07858 AP000974.1-201ENST00000623909 2387 ntBASIC17.67■□□□□ 0.42
CTSBP07858 TICAM1-202ENST00000621756 1650 ntTSL 5 BASIC17.67■□□□□ 0.42
CTSBP07858 C6orf223-202ENST00000439969 2757 ntTSL 2 BASIC17.67■□□□□ 0.42
CTSBP07858 SOX12-201ENST00000342665 4630 ntAPPRIS P1 BASIC17.67■□□□□ 0.42
CTSBP07858 ITGBL1-202ENST00000376180 2494 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CTSBP07858 KANSL1L-203ENST00000418791 3562 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
CTSBP07858 ZNF302-214ENST00000613363 2893 ntAPPRIS ALT2 TSL 4 BASIC17.66■□□□□ 0.42
CTSBP07858 JAM2-202ENST00000400532 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
CTSBP07858 ARRDC2-201ENST00000222250 2503 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CTSBP07858 RHOT2-201ENST00000315082 2539 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CTSBP07858 ACD-202ENST00000393919 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
CTSBP07858 C6orf203-202ENST00000405204 1420 ntAPPRIS P1 TSL 2 BASIC17.66■□□□□ 0.42
CTSBP07858 CIRBP-202ENST00000413636 1606 ntTSL 2 BASIC17.66■□□□□ 0.42
CTSBP07858 PLEKHM2-202ENST00000375799 4122 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
CTSBP07858 TIGD6-202ENST00000515406 2429 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CTSBP07858 ZNF623-203ENST00000526926 2612 ntAPPRIS ALT2 TSL 2 BASIC17.66■□□□□ 0.42
CTSBP07858 NDUFA12-201ENST00000327772 635 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CTSBP07858 CD1E-211ENST00000368166 1271 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
CTSBP07858 CHTOP-202ENST00000368687 1094 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
CTSBP07858 SMIM19-202ENST00000416469 691 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CTSBP07858 UPK3BP1-201ENST00000428678 509 ntBASIC17.66■□□□□ 0.42
CTSBP07858 MYD88-206ENST00000443433 914 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
CTSBP07858 AC034232.1-201ENST00000506026 1064 ntBASIC17.66■□□□□ 0.42
CTSBP07858 NMU-205ENST00000511469 756 ntTSL 3 BASIC17.66■□□□□ 0.42
CTSBP07858 TMEM218-206ENST00000527766 812 ntAPPRIS P1 TSL 3 BASIC17.66■□□□□ 0.42
CTSBP07858 EEF1D-243ENST00000532400 419 ntTSL 3 BASIC17.66■□□□□ 0.42
CTSBP07858 MFGE8-203ENST00000542878 1172 ntTSL 2 BASIC17.66■□□□□ 0.42
CTSBP07858 AL136038.3-201ENST00000561909 1096 ntBASIC17.66■□□□□ 0.42
CTSBP07858 TPSB2-201ENST00000606293 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
CTSBP07858 AC027682.6-202ENST00000621378 795 ntTSL 2 BASIC17.66■□□□□ 0.42
CTSBP07858 AC064853.5-201ENST00000641976 258 ntAPPRIS P1 BASIC17.66■□□□□ 0.42
CTSBP07858 TNFSF9-201ENST00000245817 1665 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CTSBP07858 DDX59-201ENST00000331314 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CTSBP07858 AC005082.1-201ENST00000413042 2259 ntBASIC17.66■□□□□ 0.42
CTSBP07858 SENP6-201ENST00000327284 2700 ntTSL 2 BASIC17.66■□□□□ 0.42
CTSBP07858 AC069544.2-201ENST00000640019 2528 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CTSBP07858 MMAB-204ENST00000537236 1342 ntTSL 3 BASIC17.66■□□□□ 0.42
CTSBP07858 MBD3-207ENST00000590550 2782 ntTSL 2 BASIC17.66■□□□□ 0.42
CTSBP07858 IER3-202ENST00000376377 1350 ntBASIC17.66■□□□□ 0.42
CTSBP07858 MEN1-205ENST00000377316 2868 ntTSL 5 BASIC17.65■□□□□ 0.42
CTSBP07858 CCDC50-202ENST00000392456 2454 ntAPPRIS P4 TSL 1 (best) BASIC17.65■□□□□ 0.42
CTSBP07858 WDR18-202ENST00000585809 1608 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CTSBP07858 HOXA11-201ENST00000006015 2295 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CTSBP07858 HRK-201ENST00000257572 5789 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CTSBP07858 LRRC4B-201ENST00000389201 2958 ntAPPRIS P1 TSL 2 BASIC17.65■□□□□ 0.42
CTSBP07858 CDK18-217ENST00000506784 2143 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
CTSBP07858 ADPGK-201ENST00000311669 2557 ntAPPRIS P1 TSL 2 BASIC17.65■□□□□ 0.42
CTSBP07858 GGT2-201ENST00000401924 2366 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
CTSBP07858 AL391807.1-203ENST00000604392 2365 ntBASIC17.65■□□□□ 0.42
CTSBP07858 FARSA-202ENST00000423140 1720 ntTSL 2 BASIC17.65■□□□□ 0.42
CTSBP07858 OSMR-202ENST00000502536 1740 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
CTSBP07858 GUCA1B-201ENST00000230361 1113 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CTSBP07858 MADCAM1-203ENST00000382683 603 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
CTSBP07858 PDLIM7-205ENST00000393551 1226 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
CTSBP07858 SMYD3-204ENST00000403792 1209 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
CTSBP07858 DAP-202ENST00000432074 1048 ntTSL 2 BASIC17.65■□□□□ 0.42
CTSBP07858 FXYD7-203ENST00000586063 456 ntAPPRIS ALT2 TSL 3 BASIC17.65■□□□□ 0.42
CTSBP07858 CD177-202ENST00000607855 536 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
CTSBP07858 AC116407.4-201ENST00000623319 1061 ntBASIC17.65■□□□□ 0.42
CTSBP07858 AP000550.4-202ENST00000639755 178 ntBASIC17.65■□□□□ 0.42
CTSBP07858 LINC00634-201ENST00000381348 1510 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
CTSBP07858 CYP51A1P1-201ENST00000492267 1507 ntBASIC17.65■□□□□ 0.42
CTSBP07858 AP5S1-202ENST00000379567 1791 ntAPPRIS P1 TSL 2 BASIC17.65■□□□□ 0.42
CTSBP07858 SEMA3B-202ENST00000418576 1765 ntTSL 2 BASIC17.65■□□□□ 0.42
CTSBP07858 SCARF2-202ENST00000622235 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
CTSBP07858 SRRM2-AS1-203ENST00000571305 1344 ntTSL 2 BASIC17.65■□□□□ 0.42
CTSBP07858 TTC3-203ENST00000399010 2115 ntTSL 5 BASIC17.65■□□□□ 0.42
CTSBP07858 STXBP2-202ENST00000414284 1859 ntAPPRIS ALT1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CTSBP07858 MIR4300HG-201ENST00000500502 1397 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
CTSBP07858 TMPRSS5-201ENST00000299882 2232 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.42
CTSBP07858 ELMOD1-202ENST00000443271 1990 ntAPPRIS P1 TSL 2 BASIC17.64■□□□□ 0.41
CTSBP07858 CA7-202ENST00000394069 1713 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
CTSBP07858 EGFL7-204ENST00000406555 1529 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CTSBP07858 EEF1D-246ENST00000532741 2387 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
CTSBP07858 ARSA-203ENST00000395619 1824 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
CTSBP07858 MRPL24-202ENST00000368211 883 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CTSBP07858 AC115618.1-201ENST00000376775 549 ntTSL 3 BASIC17.64■□□□□ 0.41
CTSBP07858 AC116353.4-201ENST00000507279 576 ntTSL 4 BASIC17.64■□□□□ 0.41
CTSBP07858 CLN6-214ENST00000636314 442 ntTSL 3 BASIC17.64■□□□□ 0.41
CTSBP07858 AC020661.1-201ENST00000503052 1584 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
CTSBP07858 GUCA1A-201ENST00000053469 1874 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CTSBP07858 WEE1-202ENST00000450114 2799 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CTSBP07858 HOXC10-201ENST00000303460 1936 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CTSBP07858 STARD10-213ENST00000538536 1678 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
CTSBP07858 RNF113B-201ENST00000267291 1376 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CTSBP07858 AC098818.2-201ENST00000564925 2320 ntBASIC17.64■□□□□ 0.41
CTSBP07858 LAT-204ENST00000395461 1448 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
CTSBP07858 CAPZB-202ENST00000264203 2068 ntTSL 2 BASIC17.63■□□□□ 0.41
CTSBP07858 CDK17-203ENST00000543119 2442 ntTSL 2 BASIC17.63■□□□□ 0.41
CTSBP07858 LUC7L-201ENST00000293872 1456 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CTSBP07858 SPSB1-201ENST00000328089 3120 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CTSBP07858 REPS1-203ENST00000409812 2511 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
CTSBP07858 INTS11-249ENST00000618806 1523 ntTSL 2 BASIC17.63■□□□□ 0.41
CTSBP07858 LURAP1-201ENST00000371980 1854 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CTSBP07858 ACADS-201ENST00000242592 1950 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 32.4 ms