Protein–RNA interactions for Protein: P05204

HMGN2, Non-histone chromosomal protein HMG-17, humanhuman

Known RBP Predictions only

Length 90 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN2P05204 AC044860.1-201ENST00000560756 1160 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
HMGN2P05204 MIR4785-201ENST00000585005 73 ntBASIC17.44■□□□□ 0.38
HMGN2P05204 IMPA2-208ENST00000589238 923 ntTSL 3 BASIC17.44■□□□□ 0.38
HMGN2P05204 PRKACA-209ENST00000590853 1101 ntTSL 5 BASIC17.44■□□□□ 0.38
HMGN2P05204 FGF13-208ENST00000626909 1039 ntTSL 2 BASIC17.44■□□□□ 0.38
HMGN2P05204 MYC-208ENST00000641036 567 ntBASIC17.44■□□□□ 0.38
HMGN2P05204 LYPD3-201ENST00000244333 1694 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
HMGN2P05204 SLC25A51-202ENST00000377716 1691 ntAPPRIS P1 TSL 3 BASIC17.44■□□□□ 0.38
HMGN2P05204 ZBTB46-203ENST00000395104 5198 ntAPPRIS P1 TSL 2 BASIC17.44■□□□□ 0.38
HMGN2P05204 TWIST2-202ENST00000612363 1404 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
HMGN2P05204 FDXR-214ENST00000581530 1827 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
HMGN2P05204 AAED1-201ENST00000375234 2863 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
HMGN2P05204 RAPH1-201ENST00000308091 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
HMGN2P05204 TMTC1-203ENST00000539277 2758 ntAPPRIS P2 TSL 1 (best) BASIC17.44■□□□□ 0.38
HMGN2P05204 MCOLN2-201ENST00000284027 1729 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
HMGN2P05204 SULF2-201ENST00000359930 4915 ntAPPRIS P4 TSL 1 (best) BASIC17.44■□□□□ 0.38
HMGN2P05204 MRPL3-202ENST00000425847 1457 ntTSL 2 BASIC17.44■□□□□ 0.38
HMGN2P05204 SMARCD1-201ENST00000381513 3237 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
HMGN2P05204 MIDN-206ENST00000591446 3243 ntAPPRIS P2 TSL 1 (best) BASIC17.43■□□□□ 0.38
HMGN2P05204 NOMO1-201ENST00000287667 4355 ntAPPRIS P2 TSL 1 (best) BASIC17.43■□□□□ 0.38
HMGN2P05204 NPNT-203ENST00000427316 2481 ntAPPRIS ALT2 TSL 2 BASIC17.43■□□□□ 0.38
HMGN2P05204 AVL9-209ENST00000640103 1367 ntTSL 5 BASIC17.43■□□□□ 0.38
HMGN2P05204 FGFR3-205ENST00000440486 4287 ntAPPRIS P3 TSL 5 BASIC17.43■□□□□ 0.38
HMGN2P05204 SALRNA1-201ENST00000555871 2086 ntTSL 4 BASIC17.43■□□□□ 0.38
HMGN2P05204 SLCO4A1-201ENST00000217159 2776 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
HMGN2P05204 GAL3ST4-204ENST00000423751 1695 ntTSL 3 BASIC17.43■□□□□ 0.38
HMGN2P05204 GPAT2P1-201ENST00000444924 1672 ntBASIC17.43■□□□□ 0.38
HMGN2P05204 MAFF-207ENST00000538999 2365 ntTSL 2 BASIC17.43■□□□□ 0.38
HMGN2P05204 NDUFS6-201ENST00000274137 1082 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
HMGN2P05204 UNC93B2-201ENST00000285383 730 ntBASIC17.43■□□□□ 0.38
HMGN2P05204 TIMM17B-201ENST00000376582 950 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
HMGN2P05204 ATP5S-204ENST00000426751 1171 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
HMGN2P05204 CT47A1-201ENST00000433030 1288 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
HMGN2P05204 DHDH-203ENST00000522614 776 ntTSL 5 BASIC17.43■□□□□ 0.38
HMGN2P05204 FOXN3-AS1-201ENST00000555562 1077 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
HMGN2P05204 AP005242.2-201ENST00000580065 1175 ntBASIC17.43■□□□□ 0.38
HMGN2P05204 SMAGP-204ENST00000603838 816 ntTSL 2 BASIC17.43■□□□□ 0.38
HMGN2P05204 PIGH-201ENST00000216452 1420 ntAPPRIS P2 TSL 1 (best) BASIC17.43■□□□□ 0.38
HMGN2P05204 SLC35E2-201ENST00000246421 1430 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
HMGN2P05204 AC007613.1-201ENST00000572811 2597 ntBASIC17.43■□□□□ 0.38
HMGN2P05204 C5orf30-203ENST00000515669 1573 ntAPPRIS P1 TSL 3 BASIC17.43■□□□□ 0.38
HMGN2P05204 TFCP2-205ENST00000549867 1727 ntTSL 5 BASIC17.43■□□□□ 0.38
HMGN2P05204 TMEM206-201ENST00000261455 2475 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
HMGN2P05204 CCDC50-202ENST00000392456 2454 ntAPPRIS P4 TSL 1 (best) BASIC17.43■□□□□ 0.38
HMGN2P05204 KCNQ2-218ENST00000629676 2399 ntTSL 5 BASIC17.43■□□□□ 0.38
HMGN2P05204 NOMO3-202ENST00000399336 4356 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
HMGN2P05204 RPS6KA1-204ENST00000374168 3186 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
HMGN2P05204 DNM1-211ENST00000627061 2724 ntTSL 5 BASIC17.42■□□□□ 0.38
HMGN2P05204 XYLT2-203ENST00000507602 2107 ntTSL 2 BASIC17.42■□□□□ 0.38
HMGN2P05204 BICD1-207ENST00000551848 1962 ntBASIC17.42■□□□□ 0.38
HMGN2P05204 CLN3-206ENST00000360019 1840 ntTSL 2 BASIC17.42■□□□□ 0.38
HMGN2P05204 ISYNA1-206ENST00000578963 1691 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
HMGN2P05204 ZCCHC17-205ENST00000615916 1652 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
HMGN2P05204 APIP-201ENST00000395787 1366 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
HMGN2P05204 GCH1-207ENST00000622544 2923 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
HMGN2P05204 HNRNPM-201ENST00000325495 2494 ntAPPRIS P4 TSL 1 (best) BASIC17.42■□□□□ 0.38
HMGN2P05204 MSLN-202ENST00000545450 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
HMGN2P05204 SNX17-201ENST00000233575 2044 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
HMGN2P05204 HOXC11-201ENST00000243082 2039 ntTSL 3 BASIC17.42■□□□□ 0.38
HMGN2P05204 ASZ1-201ENST00000284629 1865 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
HMGN2P05204 RNH1-201ENST00000354420 1894 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
HMGN2P05204 ANKS3-201ENST00000304283 2662 ntAPPRIS P1 TSL 2 BASIC17.42■□□□□ 0.38
HMGN2P05204 ITGA4-202ENST00000339307 1403 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
HMGN2P05204 KRT8P45-201ENST00000414328 1447 ntBASIC17.42■□□□□ 0.38
HMGN2P05204 AC112777.1-201ENST00000540175 1423 ntBASIC17.42■□□□□ 0.38
HMGN2P05204 TMEM240-201ENST00000378733 718 ntAPPRIS P1 TSL 2 BASIC17.42■□□□□ 0.38
HMGN2P05204 USF2-203ENST00000379134 648 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
HMGN2P05204 RHOG-202ENST00000396978 1066 ntAPPRIS P1 TSL 3 BASIC17.42■□□□□ 0.38
HMGN2P05204 AL023284.2-201ENST00000405850 579 ntBASIC17.42■□□□□ 0.38
HMGN2P05204 RBM17P1-201ENST00000453646 1190 ntBASIC17.42■□□□□ 0.38
HMGN2P05204 KHDRBS1-204ENST00000492989 1215 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
HMGN2P05204 PACRGL-207ENST00000502938 810 ntTSL 4 BASIC17.42■□□□□ 0.38
HMGN2P05204 IGHMBP2-205ENST00000539224 785 ntTSL 3 BASIC17.42■□□□□ 0.38
HMGN2P05204 TGIF1-219ENST00000551541 990 ntTSL 2 BASIC17.42■□□□□ 0.38
HMGN2P05204 SIVA1-207ENST00000556195 674 ntTSL 3 BASIC17.42■□□□□ 0.38
HMGN2P05204 AC008763.3-201ENST00000597959 777 ntAPPRIS P1 TSL 4 BASIC17.42■□□□□ 0.38
HMGN2P05204 PLPPR2-208ENST00000591608 2552 ntAPPRIS ALT2 TSL 2 BASIC17.42■□□□□ 0.38
HMGN2P05204 MUTYH-202ENST00000355498 1776 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
HMGN2P05204 PTTG1IP-203ENST00000397887 2413 ntTSL 4 BASIC17.42■□□□□ 0.38
HMGN2P05204 SLC47A2-201ENST00000325411 2258 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
HMGN2P05204 AK1-203ENST00000373176 2266 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
HMGN2P05204 AATF-208ENST00000619387 2141 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
HMGN2P05204 BTBD11-201ENST00000280758 5767 ntAPPRIS P3 TSL 5 BASIC17.42■□□□□ 0.38
HMGN2P05204 HERPUD2-201ENST00000311350 2474 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
HMGN2P05204 SHANK3-203ENST00000445220 5175 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
HMGN2P05204 CDK4-202ENST00000312990 1650 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
HMGN2P05204 ZNF280B-203ENST00000626650 5721 ntAPPRIS P1 TSL 2 BASIC17.42■□□□□ 0.38
HMGN2P05204 SRMS-201ENST00000217188 1516 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
HMGN2P05204 CCK-202ENST00000396169 1527 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
HMGN2P05204 INTS11-249ENST00000618806 1523 ntTSL 2 BASIC17.42■□□□□ 0.38
HMGN2P05204 PLA2G2F-201ENST00000375102 2723 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
HMGN2P05204 RCAN3-205ENST00000436717 2574 ntTSL 3 BASIC17.41■□□□□ 0.38
HMGN2P05204 SMN2-202ENST00000380742 1388 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
HMGN2P05204 PCSK5-202ENST00000376767 2845 ntTSL 2 BASIC17.41■□□□□ 0.38
HMGN2P05204 DOC2A-208ENST00000564944 1782 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
HMGN2P05204 SPART-209ENST00000494062 3018 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
HMGN2P05204 GNAS-AS1-202ENST00000443966 2341 ntTSL 5 BASIC17.41■□□□□ 0.38
HMGN2P05204 LINC00461-203ENST00000504246 2300 ntTSL 2 BASIC17.41■□□□□ 0.38
HMGN2P05204 ORC5-201ENST00000297431 1958 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
HMGN2P05204 KDM4B-202ENST00000381759 3058 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 28.4 ms