Protein–RNA interactions for Protein: P05060

CHGB, Secretogranin-1, humanhuman

Predictions only

Length 677 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHGBP05060 AC112497.1-201ENST00000624824 639 ntBASIC22.41■■□□□ 1.18
CHGBP05060 AL157888.1-201ENST00000631930 593 ntBASIC22.41■■□□□ 1.18
CHGBP05060 SMIM29-209ENST00000636500 1186 ntTSL 1 (best) BASIC22.41■■□□□ 1.18
CHGBP05060 CD55-206ENST00000391921 2433 ntTSL 1 (best) BASIC22.41■■□□□ 1.18
CHGBP05060 MAP4K4-210ENST00000425019 4403 ntTSL 5 BASIC22.41■■□□□ 1.18
CHGBP05060 TNFRSF8-202ENST00000413146 2363 ntTSL 1 (best) BASIC22.41■■□□□ 1.18
CHGBP05060 PDXK-219ENST00000621478 1967 ntTSL 1 (best) BASIC22.41■■□□□ 1.18
CHGBP05060 HLA-G-205ENST00000428701 1578 ntAPPRIS P2 BASIC22.41■■□□□ 1.18
CHGBP05060 CD82-201ENST00000227155 2289 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
CHGBP05060 MAN1B1-207ENST00000535144 2296 ntTSL 2 BASIC22.41■■□□□ 1.18
CHGBP05060 SMARCC2-201ENST00000267064 4076 ntAPPRIS P4 TSL 1 (best) BASIC22.41■■□□□ 1.18
CHGBP05060 LRCH4-201ENST00000310300 2552 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
CHGBP05060 LONP1-215ENST00000593119 2918 ntTSL 2 BASIC22.41■■□□□ 1.18
CHGBP05060 JAM2-202ENST00000400532 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC22.4■■□□□ 1.18
CHGBP05060 PLK5-201ENST00000334770 2106 ntAPPRIS P2 TSL 2 BASIC22.4■■□□□ 1.18
CHGBP05060 PAX1-201ENST00000398485 2838 ntAPPRIS P3 TSL 5 BASIC22.4■■□□□ 1.18
CHGBP05060 PRDM8-202ENST00000415738 3124 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
CHGBP05060 NUP50-AS1-201ENST00000426282 2076 ntTSL 1 (best) BASIC22.4■■□□□ 1.18
CHGBP05060 FAM110A-203ENST00000381939 1737 ntAPPRIS P1 TSL 3 BASIC22.4■■□□□ 1.18
CHGBP05060 NOL3-211ENST00000568146 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC22.4■■□□□ 1.18
CHGBP05060 PRR5-ARHGAP8-201ENST00000352766 2043 ntAPPRIS P1 TSL 2 BASIC22.4■■□□□ 1.18
CHGBP05060 ZNF787-202ENST00000587279 1657 ntTSL 2 BASIC22.4■■□□□ 1.18
CHGBP05060 AL020996.1-203ENST00000536896 2307 ntBASIC22.4■■□□□ 1.18
CHGBP05060 HSD17B1-202ENST00000585807 4982 ntAPPRIS P3 TSL 1 (best) BASIC22.4■■□□□ 1.18
CHGBP05060 ELMOD1-202ENST00000443271 1990 ntAPPRIS P1 TSL 2 BASIC22.4■■□□□ 1.18
CHGBP05060 BLOC1S3-201ENST00000433642 2601 ntAPPRIS P1 TSL 2 BASIC22.4■■□□□ 1.18
CHGBP05060 TPCN2-201ENST00000294309 2931 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
CHGBP05060 PTN-201ENST00000348225 1614 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
CHGBP05060 OXT-201ENST00000217386 513 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
CHGBP05060 MED4-202ENST00000378586 931 ntAPPRIS ALT2 TSL 2 BASIC22.4■■□□□ 1.18
CHGBP05060 FAM8A6P-201ENST00000407496 1135 ntBASIC22.4■■□□□ 1.18
CHGBP05060 DMKN-208ENST00000424570 1293 ntAPPRIS ALT2 TSL 1 (best) BASIC22.4■■□□□ 1.18
CHGBP05060 FIS1-207ENST00000474120 915 ntTSL 1 (best) BASIC22.4■■□□□ 1.18
CHGBP05060 MTHFS-202ENST00000559722 948 ntTSL 2 BASIC22.4■■□□□ 1.18
CHGBP05060 AL512604.3-201ENST00000569583 964 ntBASIC22.4■■□□□ 1.18
CHGBP05060 DUX4-205ENST00000570263 768 ntAPPRIS ALT2 TSL 1 (best) BASIC22.4■■□□□ 1.18
CHGBP05060 AC015961.2-201ENST00000589281 701 ntTSL 3 BASIC22.4■■□□□ 1.18
CHGBP05060 PTPA-204ENST00000355007 2515 ntTSL 5 BASIC22.4■■□□□ 1.18
CHGBP05060 HEXIM2-201ENST00000307275 1528 ntAPPRIS P1 TSL 2 BASIC22.4■■□□□ 1.18
CHGBP05060 PTTG1IP-203ENST00000397887 2413 ntTSL 4 BASIC22.4■■□□□ 1.18
CHGBP05060 PDE8A-202ENST00000339708 2663 ntAPPRIS ALT2 TSL 1 (best) BASIC22.4■■□□□ 1.18
CHGBP05060 P2RY6-201ENST00000349767 1700 ntAPPRIS P1 TSL 2 BASIC22.4■■□□□ 1.18
CHGBP05060 FAM222A-202ENST00000538780 3294 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.18
CHGBP05060 ATP6V0E2-203ENST00000456496 2722 ntTSL 1 (best) BASIC22.39■■□□□ 1.18
CHGBP05060 DNM1-206ENST00000475805 2710 ntAPPRIS ALT1 TSL 2 BASIC22.39■■□□□ 1.18
CHGBP05060 ATP6V0E2-213ENST00000615196 2727 ntTSL 1 (best) BASIC22.39■■□□□ 1.18
CHGBP05060 USP39-201ENST00000323701 2177 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.18
CHGBP05060 AC034236.2-201ENST00000606662 1610 ntBASIC22.39■■□□□ 1.18
CHGBP05060 NARFL-201ENST00000251588 2112 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.18
CHGBP05060 LGALS7B-201ENST00000314980 483 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
CHGBP05060 SPDYE13P-201ENST00000445314 798 ntBASIC22.39■■□□□ 1.17
CHGBP05060 CNTD2-203ENST00000513948 787 ntAPPRIS ALT2 TSL 2 BASIC22.39■■□□□ 1.17
CHGBP05060 LTBR-211ENST00000543190 785 ntTSL 3 BASIC22.39■■□□□ 1.17
CHGBP05060 L3HYPDH-201ENST00000247194 1527 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
CHGBP05060 SLC29A2-201ENST00000311161 2262 ntTSL 1 (best) BASIC22.39■■□□□ 1.17
CHGBP05060 RGMB-AS1-201ENST00000498871 1903 ntTSL 2 BASIC22.39■■□□□ 1.17
CHGBP05060 ABCB9-202ENST00000344275 2394 ntTSL 1 (best) BASIC22.39■■□□□ 1.17
CHGBP05060 TWIST2-202ENST00000612363 1404 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
CHGBP05060 IGFALS-202ENST00000415638 2136 ntTSL 2 BASIC22.39■■□□□ 1.17
CHGBP05060 FBXL20-202ENST00000394294 2309 ntTSL 1 (best) BASIC22.39■■□□□ 1.17
CHGBP05060 KCNQ2-205ENST00000360480 2775 ntAPPRIS ALT2 TSL 5 BASIC22.38■■□□□ 1.17
CHGBP05060 CNNM3-202ENST00000377060 3308 ntTSL 2 BASIC22.38■■□□□ 1.17
CHGBP05060 SPIRE2-201ENST00000378247 3235 ntAPPRIS P2 TSL 1 (best) BASIC22.38■■□□□ 1.17
CHGBP05060 EIF2B4-210ENST00000493344 1949 ntTSL 5 BASIC22.38■■□□□ 1.17
CHGBP05060 LUC7L2-210ENST00000619796 2783 ntTSL 1 (best) BASIC22.38■■□□□ 1.17
CHGBP05060 ARSB-201ENST00000264914 5327 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
CHGBP05060 GGCT-202ENST00000275428 1173 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
CHGBP05060 C14orf144-201ENST00000553757 537 ntTSL 4 BASIC22.38■■□□□ 1.17
CHGBP05060 HOMEZ-201ENST00000357460 4971 ntAPPRIS P2 TSL 1 (best) BASIC22.38■■□□□ 1.17
CHGBP05060 COL4A3BP-201ENST00000261415 2262 ntTSL 1 (best) BASIC22.38■■□□□ 1.17
CHGBP05060 CDCA7L-203ENST00000406877 3066 ntAPPRIS P3 TSL 1 (best) BASIC22.38■■□□□ 1.17
CHGBP05060 FAM213A-206ENST00000615554 2213 ntAPPRIS P1 TSL 5 BASIC22.38■■□□□ 1.17
CHGBP05060 FIP1L1-202ENST00000337488 2198 ntTSL 1 (best) BASIC22.38■■□□□ 1.17
CHGBP05060 FIP1L1-203ENST00000358575 2180 ntAPPRIS P4 TSL 2 BASIC22.38■■□□□ 1.17
CHGBP05060 AGO3-202ENST00000324350 1726 ntTSL 2 BASIC22.37■■□□□ 1.17
CHGBP05060 RTEL1-204ENST00000370003 2273 ntTSL 2 BASIC22.37■■□□□ 1.17
CHGBP05060 NRXN2-203ENST00000377551 6373 ntAPPRIS P3 TSL 1 (best) BASIC22.37■■□□□ 1.17
CHGBP05060 SAMD11-216ENST00000620200 1874 ntTSL 5 BASIC22.37■■□□□ 1.17
CHGBP05060 COQ10B-201ENST00000263960 2239 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
CHGBP05060 EIF4E3-201ENST00000295612 2764 ntTSL 1 (best) BASIC22.37■■□□□ 1.17
CHGBP05060 SPAG4-201ENST00000374273 1453 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
CHGBP05060 MYOZ3-203ENST00000517768 1451 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
CHGBP05060 PLCB1-204ENST00000404098 1260 ntTSL 3 BASIC22.37■■□□□ 1.17
CHGBP05060 AC003075.1-204ENST00000433005 540 ntTSL 2 BASIC22.37■■□□□ 1.17
CHGBP05060 ST6GALNAC4P1-201ENST00000435385 499 ntBASIC22.37■■□□□ 1.17
CHGBP05060 COLCA2-205ENST00000614153 1264 ntTSL 3 BASIC22.37■■□□□ 1.17
CHGBP05060 LINC01819-201ENST00000422351 2156 ntTSL 5 BASIC22.37■■□□□ 1.17
CHGBP05060 HOXB1-202ENST00000577092 1414 ntBASIC22.37■■□□□ 1.17
CHGBP05060 SIGLEC10-204ENST00000436984 1776 ntTSL 2 BASIC22.37■■□□□ 1.17
CHGBP05060 AC120498.9-201ENST00000339021 3867 ntBASIC22.37■■□□□ 1.17
CHGBP05060 RNF167-205ENST00000571816 1728 ntAPPRIS P3 TSL 5 BASIC22.37■■□□□ 1.17
CHGBP05060 FMR1-206ENST00000370477 3437 ntTSL 5 BASIC22.37■■□□□ 1.17
CHGBP05060 GNG4-203ENST00000391854 5104 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
CHGBP05060 EGFL7-204ENST00000406555 1529 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
CHGBP05060 HTRA3-201ENST00000307358 2541 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
CHGBP05060 CIRBP-202ENST00000413636 1606 ntTSL 2 BASIC22.36■■□□□ 1.17
CHGBP05060 ANKS3-202ENST00000446014 2265 ntTSL 5 BASIC22.36■■□□□ 1.17
CHGBP05060 AL360181.3-201ENST00000468317 1605 ntAPPRIS P1 TSL 5 BASIC22.36■■□□□ 1.17
CHGBP05060 WIZP1-201ENST00000531444 2299 ntBASIC22.36■■□□□ 1.17
CHGBP05060 TMEM235-201ENST00000374946 2409 ntTSL 5 BASIC22.36■■□□□ 1.17
Retrieved 100 of 98,524 protein–RNA pairs in 32 ms