Protein–RNA interactions for Protein: P04440

HLA-DPB1, HLA class II histocompatibility antigen, DP beta 1 chain, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPB1P04440 CYP7B1-201ENST00000310193 2202 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
HLA-DPB1P04440 HIGD1A-201ENST00000321331 1373 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
HLA-DPB1P04440 CCM2-207ENST00000475551 2471 ntAPPRIS ALT2 TSL 2 BASIC16.78■□□□□ 0.28
HLA-DPB1P04440 CTSA-201ENST00000191018 1898 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
HLA-DPB1P04440 PABPC1L-204ENST00000255136 2129 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
HLA-DPB1P04440 ARRB2-216ENST00000574954 1348 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
HLA-DPB1P04440 RPS6KA3-201ENST00000379565 7918 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
HLA-DPB1P04440 SAMD11-210ENST00000616016 2391 ntTSL 5 BASIC16.78■□□□□ 0.28
HLA-DPB1P04440 AC005906.2-207ENST00000639005 1580 ntTSL 5 BASIC16.78■□□□□ 0.28
HLA-DPB1P04440 MARK2-207ENST00000502399 2885 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
HLA-DPB1P04440 MCOLN1-201ENST00000264079 2082 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
HLA-DPB1P04440 TRMT6-201ENST00000203001 2327 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
HLA-DPB1P04440 KDM4B-202ENST00000381759 3058 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
HLA-DPB1P04440 ABHD14A-201ENST00000273596 1062 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
HLA-DPB1P04440 AC093620.1-201ENST00000342963 583 ntTSL 3 BASIC16.78■□□□□ 0.28
HLA-DPB1P04440 C15orf48-201ENST00000344300 875 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
HLA-DPB1P04440 ZDHHC12-202ENST00000372667 1187 ntTSL 5 BASIC16.78■□□□□ 0.28
HLA-DPB1P04440 FAM201B-201ENST00000458407 597 ntBASIC16.78■□□□□ 0.28
HLA-DPB1P04440 ZNF529-AS1-202ENST00000475219 1033 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
HLA-DPB1P04440 MIR381HG-201ENST00000553692 425 ntTSL 3 BASIC16.78■□□□□ 0.28
HLA-DPB1P04440 MAX-217ENST00000557277 728 ntTSL 3 BASIC16.78■□□□□ 0.28
HLA-DPB1P04440 AL121829.2-201ENST00000620908 328 ntBASIC16.78■□□□□ 0.28
HLA-DPB1P04440 TUBA8-201ENST00000316027 1518 ntTSL 2 BASIC16.78■□□□□ 0.28
HLA-DPB1P04440 NTMT1-210ENST00000613644 1501 ntAPPRIS P1 TSL 3 BASIC16.78■□□□□ 0.28
HLA-DPB1P04440 SELENOF-201ENST00000331835 1781 ntAPPRIS P2 TSL 1 (best) BASIC16.78■□□□□ 0.28
HLA-DPB1P04440 ISY1-201ENST00000273541 1704 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
HLA-DPB1P04440 SARDH-201ENST00000298628 1484 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
HLA-DPB1P04440 NAT6-204ENST00000443094 1464 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
HLA-DPB1P04440 NRBP1-204ENST00000379863 2174 ntTSL 5 BASIC16.78■□□□□ 0.28
HLA-DPB1P04440 KRT8P8-201ENST00000434750 1448 ntBASIC16.78■□□□□ 0.28
HLA-DPB1P04440 MPV17L2-204ENST00000599612 1408 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
HLA-DPB1P04440 COL4A3BP-203ENST00000380494 5651 ntTSL 2 BASIC16.78■□□□□ 0.28
HLA-DPB1P04440 ZNF454-202ENST00000519564 2142 ntAPPRIS P1 TSL 2 BASIC16.78■□□□□ 0.28
HLA-DPB1P04440 AC126763.1-201ENST00000552015 2118 ntBASIC16.78■□□□□ 0.28
HLA-DPB1P04440 TEFM-205ENST00000581216 1891 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
HLA-DPB1P04440 KRT16-201ENST00000301653 1644 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
HLA-DPB1P04440 DSCR9-201ENST00000454482 1644 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
HLA-DPB1P04440 TMC6-202ENST00000322914 2786 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
HLA-DPB1P04440 TRMU-202ENST00000381019 1381 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
HLA-DPB1P04440 SEPT2-245ENST00000616972 3446 ntTSL 2 BASIC16.77■□□□□ 0.28
HLA-DPB1P04440 ITGB4-201ENST00000200181 5919 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
HLA-DPB1P04440 PDLIM7-203ENST00000359895 1567 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
HLA-DPB1P04440 AMACR-206ENST00000502637 1598 ntTSL 5 BASIC16.77■□□□□ 0.28
HLA-DPB1P04440 EIF3B-201ENST00000360876 3055 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
HLA-DPB1P04440 FZD10-201ENST00000229030 3281 ntAPPRIS P1 BASIC16.77■□□□□ 0.28
HLA-DPB1P04440 CIRBP-215ENST00000588030 1509 ntAPPRIS P3 TSL 5 BASIC16.77■□□□□ 0.28
HLA-DPB1P04440 SMPD1-203ENST00000527275 2188 ntAPPRIS P3 TSL 2 BASIC16.77■□□□□ 0.28
HLA-DPB1P04440 CCDC177-201ENST00000599174 4131 ntAPPRIS P1 TSL 3 BASIC16.77■□□□□ 0.28
HLA-DPB1P04440 PPP1R7-201ENST00000234038 2386 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
HLA-DPB1P04440 FNIP1-204ENST00000511848 1720 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
HLA-DPB1P04440 TRA2B-203ENST00000382191 976 ntTSL 2 BASIC16.77■□□□□ 0.28
HLA-DPB1P04440 NPY-202ENST00000405982 565 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
HLA-DPB1P04440 AC079145.1-201ENST00000416575 541 ntTSL 2 BASIC16.77■□□□□ 0.28
HLA-DPB1P04440 CCDC107-206ENST00000426546 1242 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.28
HLA-DPB1P04440 CRIP2-202ENST00000483017 1176 ntTSL 2 BASIC16.77■□□□□ 0.28
HLA-DPB1P04440 PLEKHA2-206ENST00000521746 2127 ntTSL 5 BASIC16.77■□□□□ 0.28
HLA-DPB1P04440 KCTD10-211ENST00000540411 866 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
HLA-DPB1P04440 GNB5-211ENST00000560116 918 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
HLA-DPB1P04440 AC073648.6-201ENST00000641589 218 ntBASIC16.77■□□□□ 0.28
HLA-DPB1P04440 CNOT6-202ENST00000393356 6303 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
HLA-DPB1P04440 MXRA8-209ENST00000477278 2728 ntTSL 5 BASIC16.77■□□□□ 0.28
HLA-DPB1P04440 MATN4-201ENST00000353917 1657 ntTSL 5 BASIC16.77■□□□□ 0.28
HLA-DPB1P04440 PCGF3-208ENST00000470161 1652 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
HLA-DPB1P04440 TEX264-204ENST00000415259 2290 ntAPPRIS P3 TSL 5 BASIC16.77■□□□□ 0.27
HLA-DPB1P04440 TPPP3-204ENST00000562206 1410 ntAPPRIS P1 TSL 2 BASIC16.77■□□□□ 0.27
HLA-DPB1P04440 CACNA1A-201ENST00000360228 8627 ntAPPRIS P4 TSL 1 (best) BASIC16.77■□□□□ 0.27
HLA-DPB1P04440 SH2D3C-203ENST00000373277 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.27
HLA-DPB1P04440 FARP2-202ENST00000373287 2580 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
HLA-DPB1P04440 MUTYH-202ENST00000355498 1776 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.27
HLA-DPB1P04440 KREMEN2-206ENST00000575885 1798 ntTSL 2 BASIC16.77■□□□□ 0.27
HLA-DPB1P04440 SLC25A15-201ENST00000338625 1586 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
HLA-DPB1P04440 IL17RC-206ENST00000416074 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
HLA-DPB1P04440 SLC5A10-204ENST00000395647 2140 ntTSL 2 BASIC16.76■□□□□ 0.27
HLA-DPB1P04440 AD000671.2-201ENST00000589807 1925 ntAPPRIS P1 TSL 2 BASIC16.76■□□□□ 0.27
HLA-DPB1P04440 NLE1-201ENST00000360831 1726 ntTSL 5 BASIC16.76■□□□□ 0.27
HLA-DPB1P04440 MECP2-205ENST00000453960 1729 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
HLA-DPB1P04440 HOXD11-201ENST00000249504 1533 ntAPPRIS P1 TSL 3 BASIC16.76■□□□□ 0.27
HLA-DPB1P04440 AL390860.1-201ENST00000449298 1541 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
HLA-DPB1P04440 AP006587.1-201ENST00000534129 1502 ntBASIC16.76■□□□□ 0.27
HLA-DPB1P04440 TTLL12-201ENST00000216129 3385 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
HLA-DPB1P04440 GOLGA6L3-201ENST00000507199 1679 ntBASIC16.76■□□□□ 0.27
HLA-DPB1P04440 ATP6V0B-213ENST00000532642 1685 ntTSL 2 BASIC16.76■□□□□ 0.27
HLA-DPB1P04440 PROSER1-201ENST00000352251 5168 ntAPPRIS P2 TSL 1 (best) BASIC16.76■□□□□ 0.27
HLA-DPB1P04440 ESPNP-201ENST00000270691 2015 ntBASIC16.76■□□□□ 0.27
HLA-DPB1P04440 SLC6A17-201ENST00000331565 6427 ntAPPRIS P1 TSL 2 BASIC16.76■□□□□ 0.27
HLA-DPB1P04440 PUSL1-201ENST00000379031 1287 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
HLA-DPB1P04440 FKBP2-202ENST00000394540 1002 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
HLA-DPB1P04440 LINC00969-218ENST00000452844 583 ntTSL 3 BASIC16.76■□□□□ 0.27
HLA-DPB1P04440 LINC00969-221ENST00000457233 1279 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
HLA-DPB1P04440 RTBDN-203ENST00000458671 1066 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
HLA-DPB1P04440 AC009052.1-201ENST00000567090 298 ntTSL 3 BASIC16.76■□□□□ 0.27
HLA-DPB1P04440 NCOA6-207ENST00000616167 3271 ntAPPRIS ALT2 TSL 5 BASIC16.76■□□□□ 0.27
HLA-DPB1P04440 PCDH7-201ENST00000361762 6403 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
HLA-DPB1P04440 KRT18-202ENST00000388837 1420 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
HLA-DPB1P04440 CCAR2-214ENST00000613179 1421 ntTSL 5 BASIC16.76■□□□□ 0.27
HLA-DPB1P04440 ZFC3H1-206ENST00000548100 1771 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
HLA-DPB1P04440 LENG8-202ENST00000376514 5146 ntAPPRIS ALT2 TSL 5 BASIC16.76■□□□□ 0.27
HLA-DPB1P04440 LINC01168-201ENST00000461291 5254 ntTSL 2 BASIC16.76■□□□□ 0.27
HLA-DPB1P04440 SLC35B2-205ENST00000538577 1909 ntTSL 2 BASIC16.76■□□□□ 0.27
HLA-DPB1P04440 B3GALT5-206ENST00000615480 2617 ntAPPRIS P1 TSL 2 BASIC16.76■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 27.9 ms